Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr08g0210511 Helianthus annuus HOM05D002654 ORTHO05D002430 4.7e-208 727.6 374 100.0
HanXRQChr12g0362581 Helianthus annuus HOM05D002654 ORTHO05D002430 3.3e-60 236.5 402 44.3
ECA233G3156 Erigeron canadensis HOM05D002654 ORTHO05D002430 2.2e-59 233.8 445 40.4
Lsat_1_v5_gn_8_53121 Lactuca sativa HOM05D002654 ORTHO05D002430 5.3e-50 202.6 442 37.8
ECA234G4854 Erigeron canadensis HOM05D000087 ORTHO05D000439 1.4e-37 161.4 426 35.4
HanXRQChr12g0380721 Helianthus annuus HOM05D002654 ORTHO05D002430 8.2e-35 152.1 453 34.2
Lsat_1_v5_gn_4_9921 Lactuca sativa HOM05D002654 ORTHO05D002430 3.5e-25 120.2 410 32.9
Dinv16639 Davidia involucrata HOM05D002654 ORTHO05D002430 6.1e-22 109.4 443 32.1
Dinv34160 Davidia involucrata HOM05D002654 ORTHO05D002430 2.8e-19 100.5 441 30.8
THA.LOC104801849 Tarenaya hassleriana HOM05D002654 ORTHO05D002430 8.3e-19 99.0 271 33.2
Oeu054883.1 Olea europaea HOM05D002654 ORTHO05D002430 1.1e-18 98.6 248 34.7
GSVIVG01008021001 Vitis vinifera HOM05D002654 ORTHO05D002430 2.4e-18 97.4 358 30.4
Aa31LG2G7400 Aethionema arabicum HOM05D002654 ORTHO05D002430 5.4e-18 96.3 255 35.7
AT2G02950 Arabidopsis thaliana HOM05D002654 ORTHO05D002430 4.5e-17 93.2 263 35.0
Cfa008990 Carpinus fangiana HOM05D002654 ORTHO05D002430 4.5e-17 93.2 432 30.1
BcaB07g30689 Brassica carinata HOM05D002654 ORTHO05D002430 5.9e-17 92.8 228 36.0
Sp2g13980 Schrenkiella parvula HOM05D002654 ORTHO05D002430 2.3e-16 90.9 292 32.2
GSVIVG01019998001 Vitis vinifera HOM05D002654 ORTHO05D002430 5.0e-16 89.7 257 36.2
Duzib251G0139 Durio zibethinus HOM05D002654 ORTHO05D002430 1.1e-15 88.6 471 27.6
FvH4_4g31450 Fragaria vesca HOM05D002654 ORTHO05D002430 1.5e-15 88.2 339 30.4
CSS0046015 Camellia sinensis var. sinensis HOM05D002654 ORTHO05D002430 1.9e-15 87.8 416 29.6
BcaC04g21510 Brassica carinata HOM05D002654 ORTHO05D002430 2.5e-15 87.4 239 33.9
C09p30930 Brassica napus HOM05D002654 ORTHO05D002430 2.5e-15 87.4 239 33.9
BolC9t55953H Brassica oleracea HOM05D002654 ORTHO05D002430 2.5e-15 87.4 239 33.9
A09p24050 Brassica napus HOM05D002654 ORTHO05D002430 3.3e-15 87.0 239 33.5
PGR119G1217 Punica granatum HOM05D002654 ORTHO05D002430 3.3e-15 87.0 459 28.1
Ciclev10031315m.g Citrus clementina HOM05D002654 ORTHO05D002430 4.2e-15 86.7 506 26.3
AL5G12550 Arabidopsis lyrata HOM05D002654 ORTHO05D002430 7.2e-15 85.9 271 33.2
BcaC06g31210 Brassica carinata HOM05D002654 ORTHO05D002430 7.2e-15 85.9 277 33.6
CSS0017824 Camellia sinensis var. sinensis HOM05D002654 ORTHO05D002430 7.2e-15 85.9 415 29.9
MD16G1073600 Malus domestica HOM05D002654 ORTHO05D002430 7.2e-15 85.9 465 28.2
QL03p062934 Quercus lobata HOM05D002654 ORTHO05D002430 7.2e-15 85.9 466 27.9
Gorai.005G141100 Gossypium raimondii HOM05D002654 ORTHO05D002430 9.5e-15 85.5 324 31.8
BraA09t38005Z Brassica rapa HOM05D002654 ORTHO05D002430 1.2e-14 85.1 240 33.8
Cc11_g13080 Coffea canephora HOM05D002654 ORTHO05D002430 1.2e-14 85.1 379 30.6
FAN17G2513 Fragaria x ananassa HOM05D002654 ORTHO05D002430 1.2e-14 85.1 343 28.0
Hma1.2p1_0265F.1_g106720 Hydrangea macrophylla HOM05D002654 ORTHO05D002430 1.2e-14 85.1 287 31.4
RcHm_v2.0_Chr4g0439931 Rosa chinensis HOM05D002654 ORTHO05D002430 1.6e-14 84.7 336 29.5
FAN22G0634 Fragaria x ananassa HOM05D002654 ORTHO05D002430 2.1e-14 84.3 343 27.7
PGSC0003DMG400031263 Solanum tuberosum HOM05D002654 ORTHO05D002430 4.7e-14 83.2 337 29.4
CiPaw.05G136200 Carya illinoinensis HOM05D002654 ORTHO05D002430 6.1e-14 82.8 330 29.4
FAN07G1505 Fragaria x ananassa HOM05D002654 ORTHO05D002430 6.1e-14 82.8 343 27.7
Gohir.D02G125400 Gossypium hirsutum HOM05D002654 ORTHO05D002430 6.1e-14 82.8 322 32.3
Gohir.A03G098250 Gossypium hirsutum HOM05D002654 ORTHO05D002430 8.0e-14 82.4 296 32.4
Gohir.A12G105550 Gossypium hirsutum HOM05D002654 ORTHO05D002430 8.0e-14 82.4 296 32.4
Nitab4.5_0007501g0020 Nicotiana tabacum HOM05D002654 ORTHO05D002430 8.0e-14 82.4 340 29.1
Duzib268G0299 Durio zibethinus HOM05D002654 ORTHO05D002430 1.0e-13 82.0 299 31.1
Sopen05g003360 Solanum pennellii HOM05D002654 ORTHO05D002430 1.4e-13 81.6 335 30.1
THA.LOC104805156 Tarenaya hassleriana HOM05D002654 ORTHO05D002430 1.4e-13 81.6 288 30.9
Thecc.02G347200 Theobroma cacao HOM05D002654 ORTHO05D002430 1.4e-13 81.6 298 31.2
CARHR145350 Cardamine hirsuta HOM05D002654 ORTHO05D002430 1.8e-13 81.3 270 31.5
COL.COLO4_23006 Corchorus olitorius HOM05D002654 ORTHO05D002430 1.8e-13 81.3 296 31.4
Solyc05g007480.1 Solanum lycopersicum HOM05D002654 ORTHO05D002430 1.8e-13 81.3 334 29.6
A06p10250 Brassica napus HOM05D002654 ORTHO05D002430 3.0e-13 80.5 263 31.6
C05p12030 Brassica napus HOM05D002654 ORTHO05D002430 3.0e-13 80.5 263 31.9
BraA06t24208Z Brassica rapa HOM05D002654 ORTHO05D002430 3.0e-13 80.5 262 31.7
BcaC05g25321 Brassica carinata HOM05D002654 ORTHO05D002430 4.0e-13 80.1 264 31.8
BolC5t29958H Brassica oleracea HOM05D002654 ORTHO05D002430 4.0e-13 80.1 264 31.8
CSS0037456 Camellia sinensis var. sinensis HOM05D002654 ORTHO05D002430 5.2e-13 79.7 327 30.6
Migut.L01302 Erythranthe guttata HOM05D002654 ORTHO05D002430 5.2e-13 79.7 298 31.9
CAN.G58.27 Capsicum annuum HOM05D002654 ORTHO05D002430 6.8e-13 79.3 346 28.6
Dinv19955 Davidia involucrata HOM05D000087 ORTHO05D000439 6.8e-13 79.3 329 30.1
A06p43390 Brassica napus HOM05D002654 ORTHO05D002430 8.9e-13 79.0 237 32.1
CiPaw.06G084100 Carya illinoinensis HOM05D002654 ORTHO05D002430 8.9e-13 79.0 433 27.5
DCAR_024160 Daucus carota HOM05D002654 ORTHO05D002430 8.9e-13 79.0 453 28.3
HanXRQChr12g0362591 Helianthus annuus HOM05D002654 ORTHO05D002430 8.9e-13 79.0 405 28.6
Aa31LG1G780 Aethionema arabicum HOM05D002654 ORTHO05D002430 1.2e-12 78.6 264 32.2
Eucgr.G02509 Eucalyptus grandis HOM05D002654 ORTHO05D002430 1.2e-12 78.6 310 29.4
AT1G14280 Arabidopsis thaliana HOM05D002654 ORTHO05D002430 1.5e-12 78.2 276 30.1
BraA06t27225Z Brassica rapa HOM05D002654 ORTHO05D002430 1.5e-12 78.2 237 32.5
CSS0036856 Camellia sinensis var. sinensis HOM05D002654 ORTHO05D002430 2.0e-12 77.8 348 29.6
Carub.0005s0181 Capsella rubella HOM05D002654 ORTHO05D002430 2.6e-12 77.4 291 30.2
Sp1g12630 Schrenkiella parvula HOM05D002654 ORTHO05D002430 2.6e-12 77.4 290 31.0
Sed0008815 Sechium edule HOM05D002654 ORTHO05D002430 2.6e-12 77.4 266 32.0
BcaC06g34030 Brassica carinata HOM05D002654 ORTHO05D002430 3.4e-12 77.0 245 34.3
THA.LOC104824664 Tarenaya hassleriana HOM05D002654 ORTHO05D002430 5.7e-12 76.3 246 34.1
BcaC03g17177 Brassica carinata HOM05D002654 ORTHO05D002430 9.8e-12 75.5 241 31.1
C07p33580 Brassica napus HOM05D002654 ORTHO05D002430 9.8e-12 75.5 245 33.9
BolC2t11192H Brassica oleracea HOM05D002654 ORTHO05D002430 9.8e-12 75.5 241 31.1
BolC7t43867H Brassica oleracea HOM05D002654 ORTHO05D002430 9.8e-12 75.5 245 33.9
Carub.0001s1396 Capsella rubella HOM05D002654 ORTHO05D002430 9.8e-12 75.5 277 30.0
Thhalv10009661m.g Eutrema salsugineum HOM05D002654 ORTHO05D002430 9.8e-12 75.5 299 30.1
Oeu054885.1 Olea europaea HOM05D002654 ORTHO05D002430 9.8e-12 75.5 305 28.9
Rhsim12G0063400 Rhododendron simsii HOM05D002654 ORTHO05D002430 9.8e-12 75.5 335 29.3
BcaC07g38730 Brassica carinata HOM05D002654 ORTHO05D002430 1.3e-11 75.1 279 29.7
AL1G26160 Arabidopsis lyrata HOM05D002654 ORTHO05D002430 1.7e-11 74.7 277 31.0
C02p51000 Brassica napus HOM05D002654 ORTHO05D002430 1.7e-11 74.7 246 31.7
ECA233G4149 Erigeron canadensis HOM05D002654 ORTHO05D002430 1.7e-11 74.7 212 32.5
Thhalv10004196m.g Eutrema salsugineum HOM05D002654 ORTHO05D002430 1.7e-11 74.7 302 29.5
Hma1.2p1_0795F.1_g218740 Hydrangea macrophylla HOM05D002654 ORTHO05D002430 2.8e-11 73.9 304 28.9
QL03p064352 Quercus lobata HOM05D002654 ORTHO05D002430 2.8e-11 73.9 208 35.6
BcaNung06706 Brassica carinata HOM05D002654 ORTHO05D002430 3.7e-11 73.6 264 29.5
Lsat_1_v5_gn_8_53241 Lactuca sativa HOM05D002654 ORTHO05D002430 3.7e-11 73.6 359 27.6
MSTRG.7806 Avicennia marina HOM05D002654 ORTHO05D002430 4.9e-11 73.2 311 29.3
BcaB07g30316 Brassica carinata HOM05D002654 ORTHO05D002430 4.9e-11 73.2 255 29.4
BraA02t08342Z Brassica rapa HOM05D002654 ORTHO05D002430 4.9e-11 73.2 250 33.6
SalBow2G3214 Salvia bowleyana HOM05D002654 ORTHO05D002430 4.9e-11 73.2 255 31.0
ClCG05G024340 Citrullus lanatus HOM05D002654 ORTHO05D002430 6.3e-11 72.8 283 27.9
CANSAT64G2692 Cannabis sativa HOM05D002654 ORTHO05D002430 1.1e-10 72.0 343 27.1
Medtr5g040340 Medicago truncatula HOM05D002654 ORTHO05D002430 1.1e-10 72.0 306 29.1
A02p33190 Brassica napus HOM05D002654 ORTHO05D002430 1.4e-10 71.6 249 33.3
Peaxi162Scf00541g00022 Petunia axillaris HOM05D002654 ORTHO05D002430 1.4e-10 71.6 463 27.2
Rhsim08G0155700 Rhododendron simsii HOM05D002654 ORTHO05D002430 1.4e-10 71.6 299 29.4
Lalb_Chr10g0098231 Lupinus albus HOM05D002654 ORTHO05D002430 1.8e-10 71.2 317 28.1
Ca_04788_v3 Cicer arietinum L. HOM05D002654 ORTHO05D002430 2.4e-10 70.9 286 29.0
Nn4g23142 Nelumbo nucifera HOM05D002654 ORTHO05D002430 2.4e-10 70.9 443 26.0
CAN.G628.23 Capsicum annuum HOM05D002654 ORTHO05D002430 5.4e-10 69.7 289 29.8
CiPaw.12G013900 Carya illinoinensis HOM05D002654 ORTHO05D002430 9.2e-10 68.9 247 31.6
TPR.G37132 Trifolium pratense HOM05D002654 ORTHO05D002430 1.2e-09 68.6 303 29.0
CAN.G837.8 Capsicum annuum HOM05D002654 ORTHO05D002430 1.6e-09 68.2 293 29.4
Eucgr.B00480 Eucalyptus grandis HOM05D002654 ORTHO05D002430 2.0e-09 67.8 264 31.1
Nitab4.5_0000842g0040 Nicotiana tabacum HOM05D002654 ORTHO05D002430 2.0e-09 67.8 284 30.3
Haze_07337 Corylus avellana HOM05D002654 ORTHO05D002430 2.7e-09 67.4 266 31.2
C08p16570 Brassica napus HOM05D002654 ORTHO05D002430 4.5e-09 66.6 264 29.5
BolC8t49285H Brassica oleracea HOM05D002654 ORTHO05D002430 4.5e-09 66.6 264 29.5
Glyma.01G046600 Glycine max HOM05D002654 ORTHO05D002430 4.5e-09 66.6 321 28.0
Gohir.D13G074166 Gossypium hirsutum HOM05D002654 ORTHO05D002430 4.5e-09 66.6 282 32.3
Gorai.013G084800 Gossypium raimondii HOM05D002654 ORTHO05D002430 4.5e-09 66.6 282 32.3
Actinidia19874 Actinidia chinensis HOM05D002654 ORTHO05D002430 5.9e-09 66.2 350 26.9
arahy.Tifrunner.gnm1.ann1.YTB47M Arachis hypogaea HOM05D002654 ORTHO05D002430 5.9e-09 66.2 93 51.6
Lalb_Chr17g0340621 Lupinus albus HOM05D002654 ORTHO05D002430 5.9e-09 66.2 313 27.5
Glyma.08G300500 Glycine max HOM05D002654 ORTHO05D002430 7.8e-09 65.9 215 30.7
Prupe.1G273300 Prunus persica HOM05D002654 ORTHO05D002430 7.8e-09 65.9 298 27.9
Nitab4.5_0012137g0010 Nicotiana tabacum HOM05D002654 ORTHO05D002430 1.0e-08 65.5 281 28.8
Ca_24217_v3 Cicer arietinum L. HOM05D002654 ORTHO05D002430 1.3e-08 65.1 286 29.7
Gohir.A13G074101 Gossypium hirsutum HOM05D002654 ORTHO05D002430 1.7e-08 64.7 283 31.1
Oeu033362.1 Olea europaea HOM05D002654 ORTHO05D002430 1.7e-08 64.7 189 31.7
DCAR_016544 Daucus carota HOM05D002654 ORTHO05D002430 2.3e-08 64.3 91 47.3
TWI18G0518 Tripterygium wilfordii HOM05D002654 ORTHO05D002430 2.9e-08 63.9 292 27.4
Psat2g120280 Pisum sativum HOM05D002654 ORTHO05D002430 3.9e-08 63.5 304 28.0
Cfa018955 Carpinus fangiana HOM05D002654 ORTHO05D002430 5.0e-08 63.2 140 38.6
MELO3C012089.2 Cucumis melo HOM05D002654 ORTHO05D002430 5.0e-08 63.2 64 57.8
CsaV3_5G032620 Cucumis sativus L. HOM05D002654 ORTHO05D002430 5.0e-08 63.2 90 43.3
Nitab4.5_0000269g0010 Nicotiana tabacum HOM05D002654 ORTHO05D002430 5.0e-08 63.2 323 27.9
Cpa.g.sc128.17 Carica papaya HOM05D002654 ORTHO05D002430 6.6e-08 62.8 174 33.9
AUR62005769 Chenopodium quinoa HOM05D002654 ORTHO05D002430 6.6e-08 62.8 199 30.7
Cc04_g16770 Coffea canephora HOM05D000087 ORTHO05D000439 6.6e-08 62.8 313 26.5
HanXRQChr08g0210531 Helianthus annuus HOM05D002654 ORTHO05D002430 6.6e-08 62.8 371 26.7
MBI05_g08278_MAGBIO Magnolia biondii HOM05D002654 ORTHO05D002430 6.6e-08 62.8 319 27.3
Sopen06g027150 Solanum pennellii HOM05D002654 ORTHO05D002430 6.6e-08 62.8 283 28.6
Aqoxy3G00669 Aquilegia oxysepala HOM05D002654 ORTHO05D002430 8.6e-08 62.4 382 24.9
PGSC0003DMG400033102 Solanum tuberosum HOM05D002654 ORTHO05D002430 8.6e-08 62.4 283 27.6
THA.LOC104812550 Tarenaya hassleriana HOM05D002654 ORTHO05D002430 8.6e-08 62.4 262 30.5
Dinv38698 Davidia involucrata HOM05D002654 ORTHO05D002430 1.5e-07 61.6 117 39.3
PSO339G6607 Papaver somniferum HOM05D002654 ORTHO05D002430 1.5e-07 61.6 361 26.0
Psat4g131840 Pisum sativum HOM05D002654 ORTHO05D002430 1.5e-07 61.6 134 39.6
Glyma.02G106800 Glycine max HOM05D002654 ORTHO05D002430 1.9e-07 61.2 320 27.5
Oeu022206.1 Olea europaea HOM05D002654 ORTHO05D002430 1.9e-07 61.2 134 37.3
Nn3g17221 Nelumbo nucifera HOM05D002654 ORTHO05D002430 2.5e-07 60.8 325 28.0
PSO017G0875 Papaver somniferum HOM05D002654 ORTHO05D002430 2.5e-07 60.8 320 26.6
PSO801G0551 Papaver somniferum HOM05D002654 ORTHO05D002430 3.3e-07 60.5 327 25.7
Glyma.18G120000 Glycine max HOM05D002654 ORTHO05D002430 4.3e-07 60.1 222 29.7
Nitab4.5_0000703g0220 Nicotiana tabacum HOM05D002654 ORTHO05D002430 4.3e-07 60.1 63 57.1
SalBow7G4240 Salvia bowleyana HOM05D002654 ORTHO05D002430 4.3e-07 60.1 257 27.6
CsaV3_1G005380 Cucumis sativus L. HOM05D002654 ORTHO05D002430 5.6e-07 59.7 344 26.2
Medtr8g055860 Medicago truncatula HOM05D002654 ORTHO05D002430 5.6e-07 59.7 154 33.8
Peaxi162Scf00274g00075 Petunia axillaris HOM05D002654 ORTHO05D002430 5.6e-07 59.7 97 44.3
TAR629G0269 Trochodendron aralioides HOM05D002654 ORTHO05D002430 5.6e-07 59.7 323 27.2
AUR62028788 Chenopodium quinoa HOM05D002654 ORTHO05D002430 7.3e-07 59.3 199 30.7
Lalb_Chr05g0220401 Lupinus albus HOM05D002654 ORTHO05D002430 7.3e-07 59.3 386 27.7
Psat4g139400 Pisum sativum HOM05D002654 ORTHO05D002430 7.3e-07 59.3 150 34.0
Dinv24550 Davidia involucrata HOM05D002654 ORTHO05D002430 9.5e-07 58.9 47 68.1
QL10p016685 Quercus lobata HOM05D002654 ORTHO05D002430 9.5e-07 58.9 67 53.7
Manes.01G186300 Manihot esculenta HOM05D002654 ORTHO05D002430 1.2e-06 58.5 321 26.5
Nitab4.5_0002352g0050 Nicotiana tabacum HOM05D002654 ORTHO05D002430 1.6e-06 58.2 326 27.0
Peaxi162Scf00013g00213 Petunia axillaris HOM05D002654 ORTHO05D002430 1.6e-06 58.2 272 27.6
Peaxi162Scf06066g00003 Petunia axillaris HOM05D000087 ORTHO05D002430 1.6e-06 58.2 272 27.6
VMungo0251G1966 Vigna mungo HOM05D002654 ORTHO05D002430 2.1e-06 57.8 227 29.5
Cfa019892 Carpinus fangiana HOM05D007561 ORTHO05D007661 2.8e-06 57.4 271 28.4
ClCG04G012340 Citrullus lanatus HOM05D002654 ORTHO05D002430 2.8e-06 57.4 295 26.8
MELO3C001974.2 Cucumis melo HOM05D006541 ORTHO05D008471 2.8e-06 57.4 295 27.5
Solyc06g069880.1 Solanum lycopersicum HOM05D002654 ORTHO05D002430 2.8e-06 57.4 283 26.1
Actinidia37635 Actinidia chinensis HOM05D002654 ORTHO05D002430 3.6e-06 57.0 295 27.1
HanXRQChr08g0210521 Helianthus annuus HOM05D002654 ORTHO05D002430 3.6e-06 57.0 140 36.4
ATR0564G399 Amborella trichopoda HOM05D002654 ORTHO05D002430 4.7e-06 56.6 309 25.6
Psat4g134160 Pisum sativum HOM05D002654 ORTHO05D002430 4.7e-06 56.6 76 48.7
Phvul.003G049800 Phaseolus vulgaris HOM05D002654 ORTHO05D002430 6.1e-06 56.2 229 28.8
Haze_20355 Corylus avellana HOM05D007561 ORTHO05D007661 8.0e-06 55.8 302 25.2
Potri.015G062600 Populus trichocarpa HOM05D002654 ORTHO05D002430 8.0e-06 55.8 91 39.6


User provided reference genes

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