Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr08g0207731 Helianthus annuus HOM05D004390 ORTHO05D004950 8.1e-67 256.9 127 100.0
ECA233G0624 Erigeron canadensis HOM05D004390 ORTHO05D004950 2.1e-38 162.5 94 85.1
ECA240G0924 Erigeron canadensis HOM05D004390 ORTHO05D004950 2.1e-38 162.5 94 85.1
Lsat_1_v5_gn_8_149361 Lactuca sativa HOM05D004390 ORTHO05D004950 6.0e-38 161.0 94 83.0
QL03p053718 Quercus lobata HOM05D004390 ORTHO05D004950 1.2e-33 146.7 93 75.3
Duzib248G1577 Durio zibethinus HOM05D004390 ORTHO05D004950 2.0e-33 146.0 93 74.2
Gorai.008G164900 Gossypium raimondii HOM05D004390 ORTHO05D004950 2.0e-33 146.0 92 76.1
Gohir.D01G154700 Gossypium hirsutum HOM05D004390 ORTHO05D004950 3.4e-33 145.2 93 75.3
Gorai.002G191500 Gossypium raimondii HOM05D004390 ORTHO05D004950 3.4e-33 145.2 93 75.3
Nitab4.5_0000379g0030 Nicotiana tabacum HOM05D004390 ORTHO05D004950 3.4e-33 145.2 93 72.0
Cfa009329 Carpinus fangiana HOM05D004390 ORTHO05D004950 4.5e-33 144.8 92 72.8
Lj7E465T0 Lonicera japonica HOM05D004390 ORTHO05D004950 4.5e-33 144.8 93 74.2
CiPaw.06G101400 Carya illinoinensis HOM05D004390 ORTHO05D004950 5.8e-33 144.4 91 74.7
Haze_10374 Corylus avellana HOM05D004390 ORTHO05D004950 7.6e-33 144.1 93 73.1
Gohir.D12G152500 Gossypium hirsutum HOM05D004390 ORTHO05D004950 7.6e-33 144.1 93 75.3
Manes.12G012800 Manihot esculenta HOM05D004390 ORTHO05D004950 7.6e-33 144.1 93 73.1
Nitab4.5_0000367g0030 Nicotiana tabacum HOM05D004390 ORTHO05D004950 7.6e-33 144.1 93 71.0
Gohir.A12G148600 Gossypium hirsutum HOM05D004390 ORTHO05D004950 9.9e-33 143.7 92 76.1
Medtr3g085510 Medicago truncatula HOM05D004390 ORTHO05D004950 9.9e-33 143.7 94 74.5
MELO3C011874.2 Cucumis melo HOM05D004390 ORTHO05D004950 1.3e-32 143.3 94 75.5
FAN07G0791 Fragaria x ananassa HOM05D004390 ORTHO05D004950 1.7e-32 142.9 92 72.8
FAN17G1207 Fragaria x ananassa HOM05D004390 ORTHO05D004950 1.7e-32 142.9 92 72.8
FAN22G0688 Fragaria x ananassa HOM05D004390 ORTHO05D004950 1.7e-32 142.9 92 72.8
Thecc.02G210700 Theobroma cacao HOM05D004390 ORTHO05D004950 1.7e-32 142.9 93 74.2
TAR622G0138 Trochodendron aralioides HOM05D004390 ORTHO05D004950 1.7e-32 142.9 91 76.9
Dinv14827 Davidia involucrata HOM05D001171 ORTHO05D001872 2.2e-32 142.5 93 72.0
FvH4_4g23930 Fragaria vesca HOM05D004390 ORTHO05D004950 2.2e-32 142.5 92 72.8
FAN12G2113 Fragaria x ananassa HOM05D006059 ORTHO05D004950 2.2e-32 142.5 92 72.8
ClCG11G013760 Citrullus lanatus HOM05D004390 ORTHO05D004950 2.9e-32 142.1 95 74.7
PGR102G2095 Punica granatum HOM05D004390 ORTHO05D004950 2.9e-32 142.1 95 71.6
DCAR_007008 Daucus carota HOM05D004390 ORTHO05D004950 3.8e-32 141.7 92 69.6
TAR371G0820 Trochodendron aralioides HOM05D004390 ORTHO05D004950 3.8e-32 141.7 91 73.6
Eucgr.B03484 Eucalyptus grandis HOM05D004390 ORTHO05D004950 4.9e-32 141.4 99 70.7
Psat5g095200 Pisum sativum HOM05D004390 ORTHO05D004950 4.9e-32 141.4 94 73.4
Prupe.1G228300 Prunus persica HOM05D004390 ORTHO05D004950 4.9e-32 141.4 92 71.7
Cc11_g00910 Coffea canephora HOM05D004390 ORTHO05D004950 6.4e-32 141.0 93 69.9
CsaV3_5G030350 Cucumis sativus L. HOM05D004390 ORTHO05D004950 6.4e-32 141.0 94 74.5
Gohir.A01G155400 Gossypium hirsutum HOM05D004390 ORTHO05D004950 6.4e-32 141.0 93 74.2
THA.LOC104824896 Tarenaya hassleriana HOM05D004390 ORTHO05D004950 8.4e-32 140.6 96 71.9
Carub.0007s0202 Capsella rubella HOM05D004390 ORTHO05D004950 1.1e-31 140.2 93 73.1
Cpa.g.sc34.218 Carica papaya HOM05D004390 ORTHO05D004950 1.1e-31 140.2 93 74.2
Hma1.2p1_0065F.1_g035640 Hydrangea macrophylla HOM05D004390 ORTHO05D004950 1.1e-31 140.2 93 71.0
Potri.008G175775 Populus trichocarpa HOM05D004390 ORTHO05D004950 1.1e-31 140.2 95 71.6
THA.LOC104824892 Tarenaya hassleriana HOM05D004390 ORTHO05D004950 1.1e-31 140.2 93 74.2
arahy.Tifrunner.gnm1.ann1.FA6GLZ Arachis hypogaea HOM05D004390 ORTHO05D004950 1.4e-31 139.8 94 71.3
Lsat_1_v5_gn_3_29821 Lactuca sativa HOM05D004390 ORTHO05D004950 1.4e-31 139.8 93 75.3
THA.LOC104824895 Tarenaya hassleriana HOM05D004390 ORTHO05D004950 1.4e-31 139.8 93 72.0
CSS0004094 Camellia sinensis var. sinensis HOM05D004390 ORTHO05D004950 1.9e-31 139.4 94 69.1
CSS0048605 Camellia sinensis var. sinensis HOM05D004390 ORTHO05D004950 1.9e-31 139.4 94 69.1
Migut.E00025 Erythranthe guttata HOM05D004390 ORTHO05D004950 1.9e-31 139.4 92 69.6
Glyma.11G249600 Glycine max HOM05D004390 ORTHO05D004950 1.9e-31 139.4 92 67.4
Glyma.18G007600 Glycine max HOM05D004390 ORTHO05D004950 1.9e-31 139.4 94 70.2
QL12p006243 Quercus lobata HOM05D004390 ORTHO05D004950 1.9e-31 139.4 93 72.0
Actinidia08077 Actinidia chinensis HOM05D001171 ORTHO05D001872 2.4e-31 139.0 125 56.8
AL7G12360 Arabidopsis lyrata HOM05D004390 ORTHO05D004950 2.4e-31 139.0 93 72.0
arahy.Tifrunner.gnm1.ann1.L53BL2 Arachis hypogaea HOM05D004390 ORTHO05D004950 2.4e-31 139.0 92 70.7
Glyma.08G103600 Glycine max HOM05D004390 ORTHO05D004950 2.4e-31 139.0 94 70.2
Lj4g0026719 Lotus japonicus HOM05D004390 ORTHO05D004950 3.2e-31 138.7 94 71.3
Actinidia20702 Actinidia chinensis HOM05D004390 ORTHO05D004950 4.2e-31 138.3 93 68.8
Peaxi162Scf00128g01124 Petunia axillaris HOM05D004390 ORTHO05D004950 4.2e-31 138.3 92 69.6
Actinidia09657 Actinidia chinensis HOM05D004390 ORTHO05D004950 5.5e-31 137.9 93 68.8
Phvul.001G260900 Phaseolus vulgaris HOM05D004390 ORTHO05D004950 5.5e-31 137.9 94 68.1
Sc11g0000500 Simmondsia chinensis HOM05D004390 ORTHO05D004950 5.5e-31 137.9 93 67.7
THA.LOC104824898 Tarenaya hassleriana HOM05D004390 ORTHO05D004950 5.5e-31 137.9 93 71.0
TWI18G1082 Tripterygium wilfordii HOM05D004390 ORTHO05D004950 5.5e-31 137.9 93 71.0
Glyma.05G146700 Glycine max HOM05D004390 ORTHO05D004950 7.1e-31 137.5 94 70.2
Sabra08G0134000 Salix brachista HOM05D004390 ORTHO05D004950 9.3e-31 137.1 95 70.5
Cc09_g06290 Coffea canephora HOM05D015856 ORTHO05D004950 1.2e-30 136.7 92 68.5
Thhalv10027263m.g Eutrema salsugineum HOM05D004390 ORTHO05D004950 1.2e-30 136.7 93 71.0
Phvul.002G174400 Phaseolus vulgaris HOM05D004390 ORTHO05D004950 1.2e-30 136.7 94 71.3
CANSAT80G1060 Cannabis sativa HOM05D004390 ORTHO05D004950 1.6e-30 136.3 93 69.9
BcaNung00935 Brassica carinata HOM05D004390 ORTHO05D004950 2.1e-30 136.0 93 71.0
Sp7g35820 Schrenkiella parvula HOM05D004390 ORTHO05D004950 2.1e-30 136.0 93 71.0
TPR.G28271 Trifolium pratense HOM05D004390 ORTHO05D004950 2.1e-30 136.0 94 71.3
Ca_16468_v3 Cicer arietinum L. HOM05D004390 ORTHO05D004950 2.7e-30 135.6 93 69.9
Ca_18042_v3 Cicer arietinum L. HOM05D004390 ORTHO05D004950 2.7e-30 135.6 94 70.2
COL.COLO4_20382 Corchorus olitorius HOM05D001171 ORTHO05D001872 2.7e-30 135.6 93 69.9
THA.LOC104824890 Tarenaya hassleriana HOM05D004390 ORTHO05D004950 2.7e-30 135.6 93 68.8
Atru.chr11.2308 Acer truncatum HOM05D004390 ORTHO05D004950 3.5e-30 135.2 93 69.9
Potri.010G059300 Populus trichocarpa HOM05D004390 ORTHO05D004950 3.5e-30 135.2 94 71.3
Aqoxy5G03398 Aquilegia oxysepala HOM05D004390 ORTHO05D004950 4.6e-30 134.8 89 70.8
Nitab4.5_0002210g0100 Nicotiana tabacum HOM05D004390 ORTHO05D004950 4.6e-30 134.8 93 69.9
Sed0024223 Sechium edule HOM05D004390 ORTHO05D004950 4.6e-30 134.8 94 72.3
Hund25458 Selenicereus undatus HOM05D004390 ORTHO05D004950 4.6e-30 134.8 92 67.4
arahy.Tifrunner.gnm1.ann1.CM82MG Arachis hypogaea HOM05D004390 ORTHO05D004950 6.0e-30 134.4 94 69.1
A01p00960 Brassica napus HOM05D004390 ORTHO05D004950 6.0e-30 134.4 93 69.9
BraA01t00094Z Brassica rapa HOM05D004390 ORTHO05D004950 6.0e-30 134.4 93 69.9
CAN.G638.34 Capsicum annuum HOM05D004390 ORTHO05D004950 6.0e-30 134.4 93 69.9
Medtr8g080380 Medicago truncatula HOM05D004390 ORTHO05D004950 6.0e-30 134.4 94 68.1
Nn4g22350 Nelumbo nucifera HOM05D004390 ORTHO05D004950 6.0e-30 134.4 92 67.4
Psat4g014960 Pisum sativum HOM05D004390 ORTHO05D004950 6.0e-30 134.4 94 70.2
BolC1t00106H Brassica oleracea HOM05D004390 ORTHO05D004950 7.9e-30 134.0 93 69.9
CARHR246620 Cardamine hirsuta HOM05D004390 ORTHO05D004950 7.9e-30 134.0 91 68.1
Duzib251G0716 Durio zibethinus HOM05D004390 ORTHO05D004950 7.9e-30 134.0 93 71.0
TWI75G0215 Tripterygium wilfordii HOM05D004390 ORTHO05D004950 7.9e-30 134.0 93 69.9
GSVIVG01010448001 Vitis vinifera HOM05D004390 ORTHO05D004950 7.9e-30 134.0 92 68.5
AT2G22425 Arabidopsis thaliana HOM05D004390 ORTHO05D004950 1.8e-29 132.9 93 67.7
Duzib268G0993 Durio zibethinus HOM05D004390 ORTHO05D004950 1.8e-29 132.9 91 69.2
SpUn0131_0010 Schrenkiella parvula HOM05D004390 ORTHO05D004950 1.8e-29 132.9 93 67.7
Ah.02g130970 Amaranthus hybridus HOM05D004390 ORTHO05D004950 2.3e-29 132.5 92 68.5
Rhsim10G0039200 Rhododendron simsii HOM05D004390 ORTHO05D004950 2.3e-29 132.5 88 69.3
THA.LOC109116235 Tarenaya hassleriana HOM05D004390 ORTHO05D004950 3.9e-29 131.7 79 73.4
TWI36G1003 Tripterygium wilfordii HOM05D004390 ORTHO05D004950 3.9e-29 131.7 91 65.9
Nn3g16498 Nelumbo nucifera HOM05D004390 ORTHO05D004950 5.1e-29 131.3 92 67.4
Nitab4.5_0000592g0450 Nicotiana tabacum HOM05D004390 ORTHO05D004950 6.7e-29 131.0 93 67.7
Migut.K00715 Erythranthe guttata HOM05D004390 ORTHO05D004950 8.7e-29 130.6 94 68.1
AL4G11930 Arabidopsis lyrata HOM05D004390 ORTHO05D004950 1.1e-28 130.2 93 66.7
Thhalv10000378m.g Eutrema salsugineum HOM05D004390 ORTHO05D004950 1.1e-28 130.2 93 67.7
TAR629G1658 Trochodendron aralioides HOM05D004390 ORTHO05D004950 1.5e-28 129.8 91 68.1
Aa31LG6G15170 Aethionema arabicum HOM05D004390 ORTHO05D004950 1.9e-28 129.4 93 69.9
CSS0024228 Camellia sinensis var. sinensis HOM05D004390 ORTHO05D004950 1.9e-28 129.4 93 66.7
Os12g0438900 Oryza sativa ssp. japonica HOM05D004390 ORTHO05D004950 1.9e-28 129.4 94 64.9
Aa31LG7G15420 Aethionema arabicum HOM05D004390 ORTHO05D004950 2.5e-28 129.0 93 66.7
AT4G40042 Arabidopsis thaliana HOM05D004390 ORTHO05D004950 2.5e-28 129.0 80 73.8
DCAR_031195 Daucus carota HOM05D001171 ORTHO05D006126 2.5e-28 129.0 93 62.4
Oeu058917.1 Olea europaea HOM05D004390 ORTHO05D004950 2.5e-28 129.0 93 65.6
Aa31LG7G14400 Aethionema arabicum HOM05D004390 ORTHO05D004950 3.3e-28 128.6 93 66.7
EL10Ac6g13484 Beta vulgaris HOM05D004390 ORTHO05D004950 4.3e-28 128.3 93 66.7
BraA09t41150Z Brassica rapa HOM05D004390 ORTHO05D004950 4.3e-28 128.3 93 67.7
CARHR113610 Cardamine hirsuta HOM05D004390 ORTHO05D004950 4.3e-28 128.3 93 67.7
AUR62024125 Chenopodium quinoa HOM05D004390 ORTHO05D004950 4.3e-28 128.3 79 73.4
Sopen03g001750 Solanum pennellii HOM05D004390 ORTHO05D004950 4.3e-28 128.3 93 66.7
C08p40770 Brassica napus HOM05D004390 ORTHO05D004950 5.6e-28 127.9 93 67.7
BcaB08g35066 Brassica carinata HOM05D004390 ORTHO05D004950 9.6e-28 127.1 93 65.6
A09p57580 Brassica napus HOM05D004390 ORTHO05D004950 9.6e-28 127.1 93 66.7
Carub.0004s0159 Capsella rubella HOM05D004390 ORTHO05D004950 1.6e-27 126.3 93 67.7
BcaC07g41074 Brassica carinata HOM05D004390 ORTHO05D004950 4.8e-27 124.8 93 66.7
BolC8t51641H Brassica oleracea HOM05D004390 ORTHO05D004950 4.8e-27 124.8 93 66.7
ClCG09G006830 Citrullus lanatus HOM05D004390 ORTHO05D004950 4.8e-27 124.8 94 67.0
MBI11_g07456_MAGBIO Magnolia biondii HOM05D004390 ORTHO05D004950 4.8e-27 124.8 92 65.2
Thhalv10021836m.g Eutrema salsugineum HOM05D004390 ORTHO05D004950 8.2e-27 124.0 88 63.6
Rhsim12G0027700 Rhododendron simsii HOM05D004390 ORTHO05D004950 1.8e-26 122.9 79 69.6
Zm00001eb218300 Zea mays HOM05D004390 ORTHO05D004950 2.4e-26 122.5 94 61.7
HPP92_024163 Vanilla planifolia HOM05D000064 ORTHO05D000281 4.0e-26 121.7 115 53.0
PSO478G0183 Papaver somniferum HOM05D004390 ORTHO05D004950 5.3e-26 121.3 91 64.8
HPP92_024177 Vanilla planifolia HOM05D004390 ORTHO05D004950 5.3e-26 121.3 92 60.9
PSO017G1102 Papaver somniferum HOM05D004390 ORTHO05D004950 6.9e-26 120.9 91 65.9
Carub.0003s1416 Capsella rubella HOM05D004390 ORTHO05D004950 3.4e-25 118.6 91 59.3
Ah.03g136230 Amaranthus hybridus HOM05D001171 ORTHO05D006126 4.5e-25 118.2 93 64.5
Zm00001eb052740 Zea mays HOM05D004390 ORTHO05D004950 4.5e-25 118.2 94 58.5
Lalb_Chr07g0187411 Lupinus albus HOM05D004390 ORTHO05D004950 5.8e-25 117.9 82 72.0
PSO063G2970 Papaver somniferum HOM05D004390 ORTHO05D004950 2.2e-24 115.9 91 60.4
CARHR089330 Cardamine hirsuta HOM05D004390 ORTHO05D004950 2.9e-24 115.5 81 60.5
SEGI_16803 Sequoiadendron giganteum HOM05D004390 ORTHO05D004950 4.9e-24 114.8 96 59.4
PSO782G4737 Papaver somniferum HOM05D004390 ORTHO05D004950 6.5e-24 114.4 91 59.3
ATR1098G064 Amborella trichopoda HOM05D004390 ORTHO05D004950 8.4e-24 114.0 87 62.1
Lalb_Chr12g0206281 Lupinus albus HOM05D004390 ORTHO05D004950 1.1e-23 113.6 82 68.3
MD13G1117200 Malus domestica HOM05D004390 ORTHO05D004950 1.1e-23 113.6 84 67.9
RcHm_v2.0_Chr4g0430591 Rosa chinensis HOM05D004390 ORTHO05D004950 1.1e-23 113.6 81 67.9
ATR0561G166 Amborella trichopoda HOM05D004390 ORTHO05D004950 1.4e-23 113.2 91 56.0
MBI05_g44034_MAGBIO Magnolia biondii HOM05D004390 ORTHO05D004950 1.4e-23 113.2 92 59.8
MBI13_g26147_MAGBIO Magnolia biondii HOM05D004390 ORTHO05D004950 2.5e-23 112.5 92 60.9
SMO364G0480 Selaginella moellendorffii HOM05D004390 ORTHO05D004950 5.5e-23 111.3 92 58.7
CiPaw.05G111600 Carya illinoinensis HOM05D004390 ORTHO05D004950 7.1e-23 110.9 79 69.6
Solyc03g005740.3 Solanum lycopersicum HOM05D004390 ORTHO05D004950 3.0e-21 105.5 81 64.2
Pp3c4_12150 Physcomitrium patens HOM05D004390 ORTHO05D004950 8.7e-21 104.0 74 58.1
MBI07_g16243_MAGBIO Magnolia biondii HOM05D002351 ORTHO05D004950 4.8e-19 98.2 81 59.3
Pp3c10_14440 Physcomitrium patens HOM05D004390 ORTHO05D004950 4.1e-18 95.1 74 54.1
TPR.G10940 Trifolium pratense HOM05D004390 ORTHO05D004950 2.0e-17 92.8 65 67.7
Mapoly0041s0086 Marchantia polymorpha HOM05D004390 ORTHO05D004950 1.1e-15 87.0 92 47.8
Sp3g12740 Schrenkiella parvula HOM05D004390 ORTHO05D004950 1.4e-15 86.7 61 62.3
MCO16G111 Micromonas commoda HOM05D004390 ORTHO05D004950 1.2e-14 83.6 84 42.9
Manes.13G018500 Manihot esculenta HOM05D004390 ORTHO05D004950 1.6e-14 83.2 71 54.9
MBI07_g34630_MAGBIO Magnolia biondii HOM05D004390 ORTHO05D004950 2.3e-13 79.3 68 50.0
CBR_g48133 Chara braunii HOM05D004390 ORTHO05D004950 5.1e-13 78.2 69 47.8
Nn1g04852 Nelumbo nucifera HOM05D004390 ORTHO05D004950 6.7e-13 77.8 52 67.3
Nn4g24822 Nelumbo nucifera HOM05D002155 ORTHO05D004950 6.7e-13 77.8 52 67.3
PRCOL_00005433 Prasinoderma coloniale HOM05D004390 ORTHO05D004950 1.9e-12 76.3 71 45.1
SMO145G0172 Selaginella moellendorffii HOM05D004390 ORTHO05D004950 1.1e-10 70.5 73 38.4
Lalb_Chr22g0358881 Lupinus albus HOM05D004390 ORTHO05D004950 3.1e-10 68.9 38 76.3
Pp3c3_460 Physcomitrium patens HOM05D004390 ORTHO05D004950 3.8e-08 62.0 73 34.2
SEGI_01546 Sequoiadendron giganteum HOM05D007557 ORTHO05D009573 7.2e-07 57.8 69 39.1
SMO197G0059 Selaginella moellendorffii HOM05D004390 ORTHO05D004950 1.2e-06 57.0 69 39.1
SEGI_28711 Sequoiadendron giganteum HOM05D004390 ORTHO05D004950 6.1e-06 54.7 45 51.1


User provided reference genes

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