Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr07g0206851 Helianthus annuus HOM05D005908 ORTHO05D007235 9.2e-170 600.1 300 100.0
Lsat_1_v5_gn_2_133120 Lactuca sativa HOM05D005908 ORTHO05D007235 3.0e-120 435.6 294 75.9
ECA238G1518 Erigeron canadensis HOM05D005908 ORTHO05D007235 2.8e-110 402.5 285 72.3
Actinidia32893 Actinidia chinensis HOM05D005908 ORTHO05D007235 3.9e-96 355.5 256 67.6
Lj1A993G71 Lonicera japonica HOM05D005908 ORTHO05D007235 6.9e-93 344.7 261 66.3
Dinv35179 Davidia involucrata HOM05D005908 ORTHO05D007235 1.2e-92 344.0 256 66.0
CANSAT21G0021 Cannabis sativa HOM05D005908 ORTHO05D007235 5.0e-91 338.6 268 61.2
vmacro08977 Vaccinium macrocarpon HOM05D005908 ORTHO05D007235 1.4e-90 337.0 265 64.9
Hma1.2p1_0270F.1_g108430 Hydrangea macrophylla HOM05D005908 ORTHO05D007235 4.2e-90 335.5 245 66.5
Potri.015G138400 Populus trichocarpa HOM05D005908 ORTHO05D007235 6.1e-89 331.6 278 61.2
CANSAT21G0323 Cannabis sativa HOM05D005908 ORTHO05D007235 1.0e-88 330.9 268 60.1
Sabra15G0149500 Salix brachista HOM05D005908 ORTHO05D007235 1.8e-88 330.1 276 61.6
ClCG05G007830 Citrullus lanatus HOM05D005908 ORTHO05D007235 3.9e-88 328.9 282 60.3
Atru.chr1.515 Acer truncatum HOM05D005908 ORTHO05D007235 2.6e-87 326.2 258 63.6
CsaV3_3G016830 Cucumis sativus L. HOM05D005908 ORTHO05D007235 3.3e-87 325.9 284 58.8
Nn6g34248 Nelumbo nucifera HOM05D005908 ORTHO05D007235 5.7e-87 325.1 260 63.5
Sed0015226 Sechium edule HOM05D005908 ORTHO05D007235 2.2e-86 323.2 282 59.2
Ciclev10005584m.g Citrus clementina HOM05D005908 ORTHO05D007235 2.8e-86 322.8 255 64.3
DCAR_009351 Daucus carota HOM05D005908 ORTHO05D007235 8.2e-86 321.2 303 55.4
Rhsim04G0117700 Rhododendron simsii HOM05D005908 ORTHO05D007235 8.2e-86 321.2 316 54.1
Manes.06G144000 Manihot esculenta HOM05D005908 ORTHO05D007235 1.4e-85 320.5 258 62.0
CAN.G548.2 Capsicum annuum HOM05D005908 ORTHO05D007235 2.4e-85 319.7 247 64.0
MSTRG.8762 Avicennia marina HOM05D005908 ORTHO05D007235 4.1e-85 318.9 260 62.7
TWI23G0151 Tripterygium wilfordii HOM05D005908 ORTHO05D007235 4.1e-85 318.9 255 62.0
TAR375G0795 Trochodendron aralioides HOM05D005908 ORTHO05D007235 4.1e-85 318.9 267 60.3
Cc10_g10330 Coffea canephora HOM05D005908 ORTHO05D007235 7.0e-85 318.2 267 62.5
QL09p014976 Quercus lobata HOM05D005908 ORTHO05D007235 9.1e-85 317.8 269 61.0
vmacro06719 Vaccinium macrocarpon HOM05D005908 ORTHO05D007235 1.6e-84 317.0 273 60.8
GSVIVG01010617001 Vitis vinifera HOM05D005908 ORTHO05D007235 1.6e-84 317.0 245 62.9
CiPaw.04G067300 Carya illinoinensis HOM05D005908 ORTHO05D007235 2.0e-84 316.6 276 59.1
COL.COLO4_14265 Corchorus olitorius HOM05D005908 ORTHO05D007235 5.0e-83 312.0 249 63.5
Migut.F00374 Erythranthe guttata HOM05D005908 ORTHO05D007235 6.5e-83 311.6 262 63.4
PGSC0003DMG402014313 Solanum tuberosum HOM05D005908 ORTHO05D007235 8.5e-83 311.2 297 56.2
TWI39G0968 Tripterygium wilfordii HOM05D005908 ORTHO05D007235 8.5e-83 311.2 243 64.2
MD13G1243600 Malus domestica HOM05D005908 ORTHO05D007235 1.5e-82 310.5 263 58.6
SalBow1G0690 Salvia bowleyana HOM05D005908 ORTHO05D007235 3.2e-82 309.3 285 58.6
Thecc.03G170900 Theobroma cacao HOM05D005908 ORTHO05D007235 4.2e-82 308.9 275 58.9
PSO782G1770 Papaver somniferum HOM05D005908 ORTHO05D007235 7.2e-82 308.1 250 58.8
Gohir.D09G040800 Gossypium hirsutum HOM05D005908 ORTHO05D007235 9.4e-82 307.8 281 57.3
Gorai.006G046700 Gossypium raimondii HOM05D005908 ORTHO05D007235 9.4e-82 307.8 284 56.7
Sopen03g005070 Solanum pennellii HOM05D005908 ORTHO05D007235 2.7e-81 306.2 298 55.7
Cfa008281 Carpinus fangiana HOM05D005908 ORTHO05D007235 3.6e-81 305.8 227 66.1
RcHm_v2.0_Chr1g0376741 Rosa chinensis HOM05D005908 ORTHO05D007235 4.7e-81 305.4 280 58.2
FAN03G0397 Fragaria x ananassa HOM05D005908 ORTHO05D007235 1.4e-80 303.9 265 59.6
Solyc03g026200.4 Solanum lycopersicum HOM05D005908 ORTHO05D007235 1.8e-80 303.5 298 55.0
Oeu030124.1 Olea europaea HOM05D005908 ORTHO05D007235 2.3e-80 303.1 285 55.1
VMungo0464G0636 Vigna mungo HOM05D005908 ORTHO05D007235 2.3e-80 303.1 251 59.4
FvH4_7g15530 Fragaria vesca HOM05D005908 ORTHO05D007235 4.0e-80 302.4 287 55.7
FAN06G2086 Fragaria x ananassa HOM05D005908 ORTHO05D007235 4.0e-80 302.4 287 55.7
PSO478G3277 Papaver somniferum HOM05D005908 ORTHO05D007235 4.0e-80 302.4 248 58.9
FAN06G0652 Fragaria x ananassa HOM05D005908 ORTHO05D007235 5.2e-80 302.0 287 55.4
FAN01G2408 Fragaria x ananassa HOM05D005908 ORTHO05D007235 8.8e-80 301.2 250 61.2
MBI12_g29759_MAGBIO Magnolia biondii HOM05D005908 ORTHO05D007235 8.8e-80 301.2 270 56.7
FAN10G2728 Fragaria x ananassa HOM05D005908 ORTHO05D007235 1.5e-79 300.4 289 55.7
Eucgr.K00226 Eucalyptus grandis HOM05D005908 ORTHO05D007235 3.3e-79 299.3 269 56.5
FAN10G3232 Fragaria x ananassa HOM05D005908 ORTHO05D007235 7.5e-79 298.1 289 55.4
SGA_v2.0_scaffold2G01076 Striga asiatica HOM05D005908 ORTHO05D007235 9.7e-79 297.7 305 55.7
Hma1.2p1_0270F.1_g108420 Hydrangea macrophylla HOM05D005908 ORTHO05D007235 4.8e-78 295.4 278 57.2
Aqoxy7G00441 Aquilegia oxysepala HOM05D005908 ORTHO05D007235 1.1e-77 294.3 242 61.2
Glyma.16G198400 Glycine max HOM05D005908 ORTHO05D007235 5.3e-77 292.0 241 59.8
TPR.G5821 Trifolium pratense HOM05D005908 ORTHO05D007235 2.0e-76 290.0 248 58.9
arahy.Tifrunner.gnm1.ann1.K8NCYF Arachis hypogaea HOM05D005908 ORTHO05D007235 2.7e-76 289.7 292 54.1
Cpa.g.sc107.9 Carica papaya HOM05D005908 ORTHO05D007235 3.5e-76 289.3 245 60.8
arahy.Tifrunner.gnm1.ann1.580JC2 Arachis hypogaea HOM05D005908 ORTHO05D007235 1.3e-75 287.3 292 53.4
Aa31LG3G8480 Aethionema arabicum HOM05D005908 ORTHO05D007235 6.5e-75 285.0 253 57.3
Lj4g0016789 Lotus japonicus HOM05D005908 ORTHO05D007235 1.5e-74 283.9 245 57.1
BcaB01g04184 Brassica carinata HOM05D005908 ORTHO05D007235 2.5e-74 283.1 248 58.5
Psat1g113160 Pisum sativum HOM05D005908 ORTHO05D007235 3.2e-74 282.7 239 59.0
Zm00001eb021390 Zea mays HOM05D005908 ORTHO05D007235 4.2e-74 282.3 260 53.5
Lalb_Chr01g0009141 Lupinus albus HOM05D005908 ORTHO05D007235 7.2e-74 281.6 278 53.2
AUR62016029 Chenopodium quinoa HOM05D005908 ORTHO05D007235 9.4e-74 281.2 263 56.3
Thhalv10014339m.g Eutrema salsugineum HOM05D005908 ORTHO05D007235 1.2e-73 280.8 241 58.9
Lj2g0007665 Lotus japonicus HOM05D005908 ORTHO05D007235 1.2e-73 280.8 245 56.7
Ah.13g068320 Amaranthus hybridus HOM05D005908 ORTHO05D007235 1.6e-73 280.4 289 51.9
Lj2g0024281 Lotus japonicus HOM05D005908 ORTHO05D007235 6.1e-73 278.5 243 57.6
THA.LOC104811995 Tarenaya hassleriana HOM05D005908 ORTHO05D007235 6.1e-73 278.5 245 59.6
BcaC01g06164 Brassica carinata HOM05D005908 ORTHO05D007235 8.0e-73 278.1 248 57.7
C03p18500 Brassica napus HOM05D005908 ORTHO05D007235 8.0e-73 278.1 248 57.7
BolC3t14247H Brassica oleracea HOM05D005908 ORTHO05D007235 8.0e-73 278.1 248 57.7
BraA03t10874Z Brassica rapa HOM05D005908 ORTHO05D007235 8.0e-73 278.1 245 58.4
A03p15840 Brassica napus HOM05D005908 ORTHO05D007235 1.0e-72 277.7 245 58.4
Hund04705 Selenicereus undatus HOM05D005908 ORTHO05D007235 1.4e-72 277.3 268 56.0
AL8G26480 Arabidopsis lyrata HOM05D005908 ORTHO05D007235 1.8e-72 276.9 267 55.8
CARHR265040 Cardamine hirsuta HOM05D005908 ORTHO05D007235 3.0e-72 276.2 261 55.2
Sp6g14360 Schrenkiella parvula HOM05D005908 ORTHO05D007235 3.4e-71 272.7 251 56.6
SpUn0060_0050 Schrenkiella parvula HOM05D005908 ORTHO05D007235 3.4e-71 272.7 251 56.6
Sc25g0000390 Simmondsia chinensis HOM05D005908 ORTHO05D007235 3.4e-71 272.7 289 52.9
AT5G52110 Arabidopsis thaliana HOM05D005908 ORTHO05D007235 1.3e-70 270.8 270 55.2
Carub.0008s1219 Capsella rubella HOM05D005908 ORTHO05D007235 1.7e-70 270.4 241 58.1
Nitab4.5_0005024g0020 Nicotiana tabacum HOM05D005908 ORTHO05D007235 2.4e-69 266.5 299 51.5
ATR0757G107 Amborella trichopoda HOM05D005908 ORTHO05D007235 5.4e-69 265.4 235 59.1
Prupe.1G077000 Prunus persica HOM05D005908 ORTHO05D007235 1.3e-67 260.8 280 49.6
Haze_13753 Corylus avellana HOM05D005908 ORTHO05D007235 1.1e-66 257.7 215 62.8
Nitab4.5_0001083g0110 Nicotiana tabacum HOM05D005908 ORTHO05D007235 4.2e-66 255.8 321 48.6
AUR62021234 Chenopodium quinoa HOM05D005908 ORTHO05D007235 8.0e-65 251.5 235 56.6
HPP92_001363 Vanilla planifolia HOM05D005908 ORTHO05D007235 8.0e-65 251.5 238 53.4
CDE11G0458 Ceratophyllum demersum HOM05D003547 ORTHO05D004236 9.8e-63 244.6 236 49.6
Peaxi162Scf00915g00250 Petunia axillaris HOM05D005908 ORTHO05D007235 2.2e-62 243.4 319 46.7
Gohir.A09G040000 Gossypium hirsutum HOM05D005908 ORTHO05D007235 8.3e-62 241.5 192 62.5
EL10Ac3g05695 Beta vulgaris HOM05D005908 ORTHO05D007235 1.0e-59 234.6 409 37.9
Phvul.004G121600 Phaseolus vulgaris HOM05D005908 ORTHO05D007235 6.6e-59 231.9 177 63.3
vmacro06721 Vaccinium macrocarpon HOM05D005908 ORTHO05D007235 6.8e-56 221.9 240 52.9
MELO3C006877.2 Cucumis melo HOM05D005908 ORTHO05D007235 3.5e-52 209.5 285 44.6
unitig_37.g11958 Utricularia gibba HOM05D005908 ORTHO05D007235 8.0e-49 198.4 191 54.5
HPP92_001354 Vanilla planifolia HOM05D005908 ORTHO05D007235 2.4e-45 186.8 240 44.6
SEGI_20513 Sequoiadendron giganteum HOM05D005908 ORTHO05D007235 3.2e-45 186.4 245 42.9
Lsat_1_v5_gn_2_133160 Lactuca sativa HOM05D005908 ORTHO05D007235 7.0e-45 185.3 124 75.8
Mapoly0051s0108 Marchantia polymorpha HOM05D005908 ORTHO05D007235 3.9e-43 179.5 235 44.3
AagrBONN_evm.TU.Sc2ySwM_228.723 Anthoceros agrestis HOM05D005908 ORTHO05D007235 5.1e-35 152.5 244 36.1
Pp3c13_15400 Physcomitrium patens HOM05D005908 ORTHO05D007235 3.3e-34 149.8 237 35.9
CSS0026196 Camellia sinensis var. sinensis HOM05D005908 ORTHO05D007235 3.4e-31 139.8 101 62.4
CSS0048064 Camellia sinensis var. sinensis HOM05D005908 ORTHO05D007235 3.4e-31 139.8 101 62.4
CSS0007682 Camellia sinensis var. sinensis HOM05D005908 ORTHO05D007235 7.8e-28 128.6 133 55.6
Actinidia34081 Actinidia chinensis HOM05D005908 ORTHO05D007235 1.7e-27 127.5 148 47.3
SMO364G0827 Selaginella moellendorffii HOM05D005908 ORTHO05D007235 1.7e-27 127.5 227 33.5
Dinv28477 Davidia involucrata HOM05D005908 ORTHO05D007235 3.9e-27 126.3 140 54.3
FAN03G2347 Fragaria x ananassa HOM05D005908 ORTHO05D007235 4.7e-25 119.4 171 41.5
FAN03G3234 Fragaria x ananassa HOM05D005908 ORTHO05D007235 6.2e-25 119.0 167 41.9
MCO01G567 Micromonas commoda HOM05D005908 ORTHO05D007235 8.1e-25 118.6 245 31.8
SEGI_01877 Sequoiadendron giganteum HOM05D005908 ORTHO05D007235 2.6e-23 113.6 135 48.1
Cre12.g537850 Chlamydomonas reinhardtii HOM05D005908 ORTHO05D007235 1.7e-22 110.9 260 29.2
SMO353G0077 Selaginella moellendorffii HOM05D005908 ORTHO05D007235 3.2e-21 106.7 228 31.1
CBR_g58789 Chara braunii HOM05D005908 ORTHO05D007235 4.3e-18 96.3 281 30.6
MELO3C031805.2 Cucumis melo HOM05D005908 ORTHO05D007235 3.1e-16 90.1 67 61.2
MD16G1250200 Malus domestica HOM05D005908 ORTHO05D007235 7.6e-15 85.5 76 59.2
Os10g0522500 Oryza sativa ssp. japonica HOM05D005908 ORTHO05D007235 4.9e-14 82.8 48 79.2
FvH4_7g29023 Fragaria vesca HOM05D005908 ORTHO05D007235 3.5e-12 76.6 66 56.1
FAN01G0300 Fragaria x ananassa HOM05D005908 ORTHO05D007235 6.0e-12 75.9 121 38.8
Hma1.2p1_0010F.1_g006900 Hydrangea macrophylla HOM05D005908 ORTHO05D007235 4.3e-10 69.7 56 57.1
MD12G1162900 Malus domestica HOM05D000067 ORTHO05D000097 2.1e-09 67.4 40 70.0


User provided reference genes

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