Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr07g0195931 Helianthus annuus HOM05D005002 ORTHO05D006016 1.9e-69 265.8 137 100.0
HanXRQChr14g0453401 Helianthus annuus HOM05D005002 ORTHO05D006016 5.6e-66 254.2 137 92.7
ECA238G2697 Erigeron canadensis HOM05D005002 ORTHO05D006016 3.1e-64 248.4 140 90.7
Lsat_1_v5_gn_6_32161 Lactuca sativa HOM05D005002 ORTHO05D006016 1.5e-58 229.6 137 83.9
Dinv03972 Davidia involucrata HOM05D005002 ORTHO05D006016 9.6e-58 226.9 137 82.5
CSS0022428 Camellia sinensis var. sinensis HOM05D005002 ORTHO05D006016 8.2e-57 223.8 137 80.3
Actinidia03570 Actinidia chinensis HOM05D005002 ORTHO05D006016 1.1e-56 223.4 137 79.6
Dinv03977 Davidia involucrata HOM05D005002 ORTHO05D006016 9.0e-56 220.3 137 79.6
Duzib168G1293 Durio zibethinus HOM05D005002 ORTHO05D006016 1.2e-55 219.9 137 78.1
ClCG08G013890 Citrullus lanatus HOM05D005002 ORTHO05D006016 1.5e-55 219.5 137 79.6
GSVIVG01023464001 Vitis vinifera HOM05D005002 ORTHO05D006016 1.5e-55 219.5 137 78.8
Gohir.A07G034400 Gossypium hirsutum HOM05D005002 ORTHO05D006016 2.0e-55 219.2 137 78.1
Gohir.D07G038000 Gossypium hirsutum HOM05D005002 ORTHO05D006016 2.0e-55 219.2 137 78.1
Gorai.001G039800 Gossypium raimondii HOM05D005002 ORTHO05D006016 2.0e-55 219.2 137 78.1
CSS0035568 Camellia sinensis var. sinensis HOM05D005002 ORTHO05D006016 4.5e-55 218.0 137 78.8
Gohir.A05G062833 Gossypium hirsutum HOM05D005002 ORTHO05D006016 4.5e-55 218.0 137 77.4
Gohir.A05G062900 Gossypium hirsutum HOM05D005002 ORTHO05D006016 4.5e-55 218.0 137 77.4
Gohir.D05G065400 Gossypium hirsutum HOM05D005002 ORTHO05D006016 4.5e-55 218.0 137 77.4
Gorai.009G066200 Gossypium raimondii HOM05D005002 ORTHO05D006016 4.5e-55 218.0 137 77.4
Oeu008768.2 Olea europaea HOM05D005002 ORTHO05D006016 7.6e-55 217.2 132 80.3
Glyma.18G054400 Glycine max HOM05D005002 ORTHO05D006016 1.7e-54 216.1 137 77.4
Peaxi162Scf00459g00833 Petunia axillaris HOM05D005002 ORTHO05D006016 1.7e-54 216.1 133 79.7
Thecc.09G010700 Theobroma cacao HOM05D005002 ORTHO05D006016 1.7e-54 216.1 137 76.6
CAN.G566.59 Capsicum annuum HOM05D005002 ORTHO05D006016 2.2e-54 215.7 136 77.9
Nitab4.5_0001110g0170 Nicotiana tabacum HOM05D005002 ORTHO05D006016 2.2e-54 215.7 133 78.9
Sed0020410 Sechium edule HOM05D005002 ORTHO05D006016 2.2e-54 215.7 137 77.4
TAR622G0454 Trochodendron aralioides HOM05D005002 ORTHO05D006016 2.2e-54 215.7 137 76.6
GSVIVG01023467001 Vitis vinifera HOM05D005002 ORTHO05D006016 2.9e-54 215.3 137 78.1
CSS0010222 Camellia sinensis var. sinensis HOM05D005002 ORTHO05D006016 3.8e-54 214.9 137 78.8
Eucgr.B03202 Eucalyptus grandis HOM05D005002 ORTHO05D006016 3.8e-54 214.9 132 79.5
VMungo1383G2539 Vigna mungo HOM05D005002 ORTHO05D006016 3.8e-54 214.9 137 76.6
Lalb_Chr08g0234011 Lupinus albus HOM05D005002 ORTHO05D006016 6.5e-54 214.2 137 76.6
Glyma.11G160400 Glycine max HOM05D005002 ORTHO05D006016 8.4e-54 213.8 137 75.9
RcHm_v2.0_Chr6g0269591 Rosa chinensis HOM05D005002 ORTHO05D006016 1.1e-53 213.4 142 79.6
Phvul.008G002400 Phaseolus vulgaris HOM05D005002 ORTHO05D006016 1.9e-53 212.6 137 76.6
Sed0003546 Sechium edule HOM05D005002 ORTHO05D006016 1.9e-53 212.6 137 75.2
VMungo1383G3578 Vigna mungo HOM05D005002 ORTHO05D006016 2.5e-53 212.2 137 75.9
Prupe.1G399400 Prunus persica HOM05D005002 ORTHO05D006016 3.2e-53 211.8 144 77.1
QL01p029339 Quercus lobata HOM05D005002 ORTHO05D006016 5.5e-53 211.1 135 77.0
vmacro05092 Vaccinium macrocarpon HOM05D005002 ORTHO05D006016 9.3e-53 210.3 138 75.4
Rhsim07G0172200 Rhododendron simsii HOM05D001416 ORTHO05D005885 2.7e-52 208.8 137 76.6
MSTRG.25811 Avicennia marina HOM05D005002 ORTHO05D006016 3.5e-52 208.4 129 77.5
FvH4_2g11240 Fragaria vesca HOM05D005002 ORTHO05D006016 3.5e-52 208.4 145 75.2
EL10Ac2g02432 Beta vulgaris HOM05D005002 ORTHO05D006016 6.0e-52 207.6 134 74.6
Nn3g17630 Nelumbo nucifera HOM05D005002 ORTHO05D006016 6.0e-52 207.6 138 76.1
Solyc12g096470.2 Solanum lycopersicum HOM05D005002 ORTHO05D006016 6.0e-52 207.6 136 74.3
Sopen12g032300 Solanum pennellii HOM05D005002 ORTHO05D006016 6.0e-52 207.6 136 74.3
PGSC0003DMG400029278 Solanum tuberosum HOM05D005002 ORTHO05D006016 6.0e-52 207.6 136 74.3
CANSAT25G2804 Cannabis sativa HOM05D005002 ORTHO05D006016 7.9e-52 207.2 137 73.7
Migut.A00405 Erythranthe guttata HOM05D005002 ORTHO05D006016 7.9e-52 207.2 132 75.8
BraA08t33811Z Brassica rapa HOM05D005002 ORTHO05D006016 1.3e-51 206.5 137 75.9
Ciclev10009813m.g Citrus clementina HOM05D005002 ORTHO05D006016 1.3e-51 206.5 148 73.0
Medtr7g080740 Medicago truncatula HOM05D005002 ORTHO05D006016 1.3e-51 206.5 140 72.9
BcaNung05179 Brassica carinata HOM05D005002 ORTHO05D006016 1.8e-51 206.1 137 75.2
A01p06560 Brassica napus HOM05D005002 ORTHO05D006016 1.8e-51 206.1 137 75.2
BraA01t00615Z Brassica rapa HOM05D005002 ORTHO05D006016 1.8e-51 206.1 137 75.2
Lj1g0025268 Lotus japonicus HOM05D005002 ORTHO05D006016 1.8e-51 206.1 135 74.8
Cc00_g22050 Coffea canephora HOM05D005002 ORTHO05D006016 2.3e-51 205.7 129 78.3
AL7G20310 Arabidopsis lyrata HOM05D005002 ORTHO05D006016 3.0e-51 205.3 137 75.2
Sp7g29520 Schrenkiella parvula HOM05D005002 ORTHO05D006016 3.0e-51 205.3 137 75.2
AT4G31720 Arabidopsis thaliana HOM05D005002 ORTHO05D006016 3.9e-51 204.9 137 74.5
QL02p017669 Quercus lobata HOM05D005002 ORTHO05D006016 3.9e-51 204.9 137 74.5
MD08G1049200 Malus domestica HOM05D005002 ORTHO05D006016 5.1e-51 204.5 137 75.9
PGR044G1228 Punica granatum HOM05D005002 ORTHO05D006016 5.1e-51 204.5 129 76.7
DCAR_020711 Daucus carota HOM05D004285 ORTHO05D006016 6.7e-51 204.1 129 79.1
BcaC09g51961 Brassica carinata HOM05D005002 ORTHO05D006016 8.7e-51 203.8 137 73.7
C01p07220 Brassica napus HOM05D005002 ORTHO05D006016 8.7e-51 203.8 137 73.7
BolC1t00713H Brassica oleracea HOM05D005002 ORTHO05D006016 8.7e-51 203.8 137 73.7
PSO782G1729 Papaver somniferum HOM05D005002 ORTHO05D006016 8.7e-51 203.8 136 77.2
Psat0s2083g0280 Pisum sativum HOM05D005002 ORTHO05D006016 8.7e-51 203.8 140 72.1
THA.LOC104819944 Tarenaya hassleriana HOM05D005002 ORTHO05D006016 8.7e-51 203.8 137 74.5
Carub.0007s0884 Capsella rubella HOM05D005002 ORTHO05D006016 1.1e-50 203.4 137 73.7
Manes.03G005700 Manihot esculenta HOM05D005002 ORTHO05D006016 1.1e-50 203.4 136 72.8
Lalb_Chr10g0091021 Lupinus albus HOM05D005002 ORTHO05D006016 1.9e-50 202.6 138 73.2
THA.LOC104803866 Tarenaya hassleriana HOM05D005002 ORTHO05D006016 1.9e-50 202.6 137 73.7
TPR.G12644 Trifolium pratense HOM05D005002 ORTHO05D006016 1.9e-50 202.6 142 71.8
TPR.G15628 Trifolium pratense HOM05D005002 ORTHO05D006016 1.9e-50 202.6 144 70.8
unitig_92.g28144 Utricularia gibba HOM05D003482 ORTHO05D004194 1.9e-50 202.6 133 75.2
A08p18490 Brassica napus HOM05D005002 ORTHO05D006016 2.5e-50 202.2 137 73.7
DCAR_020712 Daucus carota HOM05D005002 ORTHO05D006016 2.5e-50 202.2 128 78.9
PSO478G2205 Papaver somniferum HOM05D005002 ORTHO05D006016 5.7e-50 201.1 140 75.0
arahy.Tifrunner.gnm1.ann1.1V29TX Arachis hypogaea HOM05D005002 ORTHO05D006016 7.4e-50 200.7 137 71.5
Thhalv10026546m.g Eutrema salsugineum HOM05D005002 ORTHO05D006016 1.6e-49 199.5 137 71.5
BcaB03g12714 Brassica carinata HOM05D005002 ORTHO05D006016 2.8e-49 198.7 137 73.7
TWI34G0825 Tripterygium wilfordii HOM05D005002 ORTHO05D006016 2.8e-49 198.7 139 72.7
FAN24G1669 Fragaria x ananassa HOM05D005002 ORTHO05D006016 8.2e-49 197.2 169 65.7
Aa31LG2G18620 Aethionema arabicum HOM05D005002 ORTHO05D006016 1.1e-48 196.8 137 71.5
Potri.018G013300 Populus trichocarpa HOM05D005002 ORTHO05D006016 1.8e-48 196.1 120 80.8
Sabra18G0017200 Salix brachista HOM05D005002 ORTHO05D006016 4.1e-48 194.9 120 80.0
arahy.Tifrunner.gnm1.ann1.JDP7FN Arachis hypogaea HOM05D005002 ORTHO05D006016 1.5e-47 193.0 144 68.1
TWI63G0754 Tripterygium wilfordii HOM05D005002 ORTHO05D006016 2.0e-47 192.6 164 62.8
RcHm_v2.0_Chr2g0161651 Rosa chinensis HOM05D005002 ORTHO05D006016 4.5e-47 191.4 126 77.0
BcaC01g01070 Brassica carinata HOM05D005002 ORTHO05D006016 5.9e-47 191.0 125 76.8
C03p87650 Brassica napus HOM05D005002 ORTHO05D006016 5.9e-47 191.0 125 76.8
Sc23g0006270 Simmondsia chinensis HOM05D005002 ORTHO05D006016 5.9e-47 191.0 127 71.7
CDE04G1191 Ceratophyllum demersum HOM05D005002 ORTHO05D006016 1.3e-46 189.9 131 67.9
Os09g0431500 Oryza sativa ssp. japonica HOM05D005002 ORTHO05D006016 1.3e-46 189.9 127 72.4
Aqoxy7G00066 Aquilegia oxysepala HOM05D005002 ORTHO05D006016 3.8e-46 188.3 123 74.0
ATR0691G047 Amborella trichopoda HOM05D005002 ORTHO05D006016 6.5e-46 187.6 131 69.5
HPP92_000490 Vanilla planifolia HOM05D005002 ORTHO05D006016 1.9e-45 186.0 131 69.5
Zm00001eb313590 Zea mays HOM05D005002 ORTHO05D006016 6.1e-44 181.0 124 70.2
MD15G1045700 Malus domestica HOM05D005002 ORTHO05D006016 1.0e-43 180.3 137 69.3
Actinidia14152 Actinidia chinensis HOM05D005002 ORTHO05D006016 5.1e-43 177.9 110 78.2
CSS0031521 Camellia sinensis var. sinensis HOM05D005002 ORTHO05D006016 6.7e-43 177.6 110 80.0
Cfa017847 Carpinus fangiana HOM05D005002 ORTHO05D006016 6.7e-43 177.6 137 67.2
MELO3C011321.2 Cucumis melo HOM05D005002 ORTHO05D006016 6.7e-43 177.6 124 75.0
FAN15G1411 Fragaria x ananassa HOM05D000348 ORTHO05D000244 3.7e-41 171.8 106 81.1
BcaC09g51955 Brassica carinata HOM05D005002 ORTHO05D006016 1.1e-40 170.2 126 68.3
Haze_18362 Corylus avellana HOM05D005002 ORTHO05D006016 2.4e-40 169.1 110 76.4
Hma1.2p1_0192F.1_g083460 Hydrangea macrophylla HOM05D005002 ORTHO05D006016 2.4e-40 169.1 110 77.3
AUR62020301 Chenopodium quinoa HOM05D005002 ORTHO05D006016 2.6e-39 165.6 112 73.2
AUR62037698 Chenopodium quinoa HOM05D005002 ORTHO05D006016 4.5e-39 164.9 114 71.9
Ca_06528_v3 Cicer arietinum L. HOM05D005002 ORTHO05D006016 1.7e-38 162.9 113 75.2
BolC3t21083H Brassica oleracea HOM05D000888 ORTHO05D000740 1.4e-37 159.8 110 74.5
SalBow4G2991 Salvia bowleyana HOM05D005002 ORTHO05D006016 1.4e-37 159.8 107 75.7
Mapoly0011s0105 Marchantia polymorpha HOM05D005002 ORTHO05D006016 9.4e-37 157.1 126 65.1
Pp3c6_16040 Physcomitrium patens HOM05D005002 ORTHO05D006016 2.1e-36 156.0 118 66.1
CDE02G2218 Ceratophyllum demersum HOM05D002187 ORTHO05D002243 2.7e-36 155.6 106 68.9
Ah.09g224730 Amaranthus hybridus HOM05D005002 ORTHO05D006016 3.9e-35 151.8 145 55.9
unitig_93.g30701 Utricularia gibba HOM05D005002 ORTHO05D006016 4.8e-33 144.8 133 58.6
COL.COLO4_21113 Corchorus olitorius HOM05D005002 ORTHO05D006016 3.1e-32 142.1 112 65.2
BcaC09g51957 Brassica carinata HOM05D005002 ORTHO05D006016 4.1e-32 141.7 140 58.6
Lju41A41T35 Lonicera japonica HOM05D005002 ORTHO05D006016 1.9e-29 132.9 182 44.0
COL.COLO4_19003 Corchorus olitorius HOM05D005002 ORTHO05D006016 5.5e-29 131.3 85 75.3
Duzib168G1591 Durio zibethinus HOM05D005002 ORTHO05D006016 9.4e-29 130.6 83 77.1
MSTRG.9875 Avicennia marina HOM05D005002 ORTHO05D006016 2.3e-27 125.9 83 74.7
RcHm_v2.0_Chr2g0161711 Rosa chinensis HOM05D005002 ORTHO05D006016 6.7e-27 124.4 83 75.9
CBR_g30254 Chara braunii HOM05D005002 ORTHO05D006016 1.3e-25 120.2 96 58.3
Aqoxy7G00833 Aquilegia oxysepala HOM05D005002 ORTHO05D006016 3.7e-25 118.6 75 78.7
Duzib187G1493 Durio zibethinus HOM05D005002 ORTHO05D006016 6.3e-25 117.9 86 68.6
Duzib150G1286 Durio zibethinus HOM05D005002 ORTHO05D006016 8.2e-25 117.5 108 61.1
SMO141G0065 Selaginella moellendorffii HOM05D005002 ORTHO05D006016 8.2e-25 117.5 120 54.2
SMO356G0735 Selaginella moellendorffii HOM05D005002 ORTHO05D006016 8.2e-25 117.5 111 54.1
CARHR239610 Cardamine hirsuta HOM05D005002 ORTHO05D006016 1.8e-24 116.3 83 72.3
MBI15_g18374_MAGBIO Magnolia biondii HOM05D005002 ORTHO05D006016 1.0e-22 110.5 132 49.2
Nitab4.5_0000668g0030 Nicotiana tabacum HOM05D005002 ORTHO05D006016 1.9e-21 106.3 64 78.1
SGA_v2.0_scaffold193G40677 Striga asiatica HOM05D005002 ORTHO05D006016 4.2e-21 105.1 95 57.9
PRCOL_00006189 Prasinoderma coloniale HOM05D005002 ORTHO05D006016 2.3e-19 99.4 125 40.8
Lalb_Chr08g0233981 Lupinus albus HOM05D005002 ORTHO05D006016 4.0e-19 98.6 65 69.2
Lalb_Chr08g0233961 Lupinus albus HOM05D005002 ORTHO05D006016 1.5e-18 96.7 60 78.3
CiPaw.15G092700 Carya illinoinensis HOM05D005002 ORTHO05D006016 3.7e-17 92.0 53 81.1
FAN27G2219 Fragaria x ananassa HOM05D005002 ORTHO05D006016 1.6e-15 86.7 61 75.4
FAN20G1660 Fragaria x ananassa HOM05D005002 ORTHO05D006016 2.0e-15 86.3 61 73.8
SEGI_02469 Sequoiadendron giganteum HOM05D005002 ORTHO05D006016 2.0e-15 86.3 62 67.7
QL12p013723 Quercus lobata HOM05D005002 ORTHO05D006016 2.7e-15 85.9 60 71.7
COL.COLO4_27723 Corchorus olitorius HOM05D005002 ORTHO05D006016 4.5e-15 85.1 52 75.0
MCO01G145 Micromonas commoda HOM05D005002 ORTHO05D006016 5.9e-15 84.7 124 40.3
Phvul.009G222000 Phaseolus vulgaris HOM05D005002 ORTHO05D006016 5.9e-15 84.7 77 59.7
EL10Ac5g10893 Beta vulgaris HOM05D005002 ORTHO05D006016 3.6e-12 75.5 43 81.4
Actinidia25736 Actinidia chinensis HOM05D005002 ORTHO05D006016 2.3e-11 72.8 88 52.3
HanXRQChr14g0435251 Helianthus annuus HOM05D005002 ORTHO05D006016 1.3e-09 67.0 56 64.3
Cre16.g657000 Chlamydomonas reinhardtii HOM05D005002 ORTHO05D006016 3.7e-09 65.5 135 32.6


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