Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr07g0193381 Helianthus annuus HOM05D005859 ORTHO05D007576 3.2e-101 371.7 182 100.0
HanXRQChr09g0275211 Helianthus annuus HOM05D005859 ORTHO05D007576 8.0e-84 313.9 157 96.8
ECA238G0328 Erigeron canadensis HOM05D005859 ORTHO05D007576 4.1e-80 301.6 161 91.9
Lsat_1_v5_gn_5_41801 Lactuca sativa HOM05D005859 ORTHO05D007576 4.1e-80 301.6 157 93.0
Lalb_Chr11g0064301 Lupinus albus HOM05D005859 ORTHO05D007576 7.7e-79 297.4 163 88.3
FvH4_2g36340 Fragaria vesca HOM05D005859 ORTHO05D007576 2.9e-78 295.4 157 89.8
FAN15G0047 Fragaria x ananassa HOM05D005859 ORTHO05D007576 2.9e-78 295.4 157 89.8
Ciclev10009277m.g Citrus clementina HOM05D005859 ORTHO05D007576 3.8e-78 295.0 160 90.0
Prupe.1G454800 Prunus persica HOM05D005859 ORTHO05D007576 3.8e-78 295.0 157 89.2
FAN20G1422 Fragaria x ananassa HOM05D005859 ORTHO05D007576 5.0e-78 294.7 157 89.2
RcHm_v2.0_Chr6g0305541 Rosa chinensis HOM05D005859 ORTHO05D007576 5.0e-78 294.7 157 89.2
Lj1g0020437 Lotus japonicus HOM05D005859 ORTHO05D007576 1.1e-77 293.5 157 90.4
VMungo1309G0784 Vigna mungo HOM05D005859 ORTHO05D007576 1.5e-77 293.1 157 90.4
Phvul.009G104500 Phaseolus vulgaris HOM05D005859 ORTHO05D007576 1.9e-77 292.7 157 90.4
Psat5g022960 Pisum sativum HOM05D005859 ORTHO05D007576 2.5e-77 292.4 159 88.1
MD08G1121000 Malus domestica HOM05D005859 ORTHO05D007576 3.2e-77 292.0 156 89.1
Ah.07g199340 Amaranthus hybridus HOM05D005859 ORTHO05D007576 5.5e-77 291.2 161 86.3
AUR62007184 Chenopodium quinoa HOM05D005859 ORTHO05D007576 5.5e-77 291.2 157 88.5
CsaV3_2G031130 Cucumis sativus L. HOM05D005859 ORTHO05D007576 7.2e-77 290.8 157 89.2
Dinv07263 Davidia involucrata HOM05D005859 ORTHO05D007576 7.2e-77 290.8 161 88.2
CSS0019957 Camellia sinensis var. sinensis HOM05D005859 ORTHO05D007576 9.4e-77 290.4 161 88.2
Glyma.04G078700 Glycine max HOM05D005859 ORTHO05D007576 9.4e-77 290.4 157 89.8
DCAR_010833 Daucus carota HOM05D005859 ORTHO05D007576 1.6e-76 289.7 157 88.5
Potri.006G277100 Populus trichocarpa HOM05D005859 ORTHO05D007576 1.6e-76 289.7 157 88.5
CANSAT64G2965 Cannabis sativa HOM05D005859 ORTHO05D007576 2.1e-76 289.3 157 88.5
Ca_15630_v3 Cicer arietinum L. HOM05D005859 ORTHO05D007576 2.7e-76 288.9 157 88.5
Gohir.D09G062800 Gossypium hirsutum HOM05D005859 ORTHO05D007576 2.7e-76 288.9 157 89.8
Sabra06G0214800 Salix brachista HOM05D005859 ORTHO05D007576 2.7e-76 288.9 157 88.5
Atru.chr7.2673 Acer truncatum HOM05D005859 ORTHO05D007576 3.6e-76 288.5 160 88.8
Duzib151G0446 Durio zibethinus HOM05D005859 ORTHO05D007576 3.6e-76 288.5 157 89.2
Duzib151G0554 Durio zibethinus HOM05D005859 ORTHO05D007576 3.6e-76 288.5 157 89.2
Medtr3g109360 Medicago truncatula HOM05D005859 ORTHO05D007576 3.6e-76 288.5 157 88.5
MELO3C011163.2 Cucumis melo HOM05D005859 ORTHO05D007576 4.7e-76 288.1 157 88.5
Solyc02g068650.2 Solanum lycopersicum HOM05D005859 ORTHO05D007576 4.7e-76 288.1 157 89.2
Thecc.04G293600 Theobroma cacao HOM05D005859 ORTHO05D007576 4.7e-76 288.1 157 88.5
Glyma.06G080300 Glycine max HOM05D005859 ORTHO05D007576 6.1e-76 287.7 157 89.2
Gorai.006G077600 Gossypium raimondii HOM05D005859 ORTHO05D007576 6.1e-76 287.7 157 89.8
Sc10g0009100 Simmondsia chinensis HOM05D005859 ORTHO05D007576 6.1e-76 287.7 157 87.3
THA.LOC104814931 Tarenaya hassleriana HOM05D005859 ORTHO05D007576 6.1e-76 287.7 160 87.5
Actinidia22411 Actinidia chinensis HOM05D005859 ORTHO05D007576 8.0e-76 287.3 161 86.3
Potri.018G003900 Populus trichocarpa HOM05D005859 ORTHO05D007576 8.0e-76 287.3 157 87.3
Sed0013908 Sechium edule HOM05D005859 ORTHO05D007576 8.0e-76 287.3 157 88.5
TPR.G1368 Trifolium pratense HOM05D005859 ORTHO05D007576 8.0e-76 287.3 157 87.3
Sabra18G0009500 Salix brachista HOM05D005859 ORTHO05D007576 1.0e-75 287.0 157 87.3
PGSC0003DMG400010428 Solanum tuberosum HOM05D005859 ORTHO05D007576 1.0e-75 287.0 157 88.5
EL10Ac5g12246 Beta vulgaris HOM05D005859 ORTHO05D007576 1.4e-75 286.6 156 87.8
PGR042G0112 Punica granatum HOM05D005859 ORTHO05D007576 1.4e-75 286.6 157 87.3
CAN.G149.19 Capsicum annuum HOM05D005859 ORTHO05D007576 1.8e-75 286.2 156 87.8
ClCG08G012440 Citrullus lanatus HOM05D005859 ORTHO05D007576 1.8e-75 286.2 157 87.9
QL12p026076 Quercus lobata HOM05D005859 ORTHO05D007576 1.8e-75 286.2 157 87.9
Rhsim05G0088100 Rhododendron simsii HOM05D005859 ORTHO05D007576 1.8e-75 286.2 157 87.9
Haze_21816 Corylus avellana HOM05D005859 ORTHO05D007576 3.0e-75 285.4 157 87.3
Nn2g12765 Nelumbo nucifera HOM05D005859 ORTHO05D007576 3.0e-75 285.4 177 79.7
COL.COLO4_34684 Corchorus olitorius HOM05D005859 ORTHO05D007576 4.0e-75 285.0 157 87.3
Sabra18G0001700 Salix brachista HOM05D005859 ORTHO05D007576 5.2e-75 284.6 157 86.6
Sed0022456 Sechium edule HOM05D005859 ORTHO05D007576 5.2e-75 284.6 157 87.3
Cpa.g.sc10.203 Carica papaya HOM05D005859 ORTHO05D007576 6.8e-75 284.3 157 87.9
Cfa013324 Carpinus fangiana HOM05D005859 ORTHO05D007576 6.8e-75 284.3 156 87.8
Rhsim02G0125100 Rhododendron simsii HOM05D005859 ORTHO05D007576 6.8e-75 284.3 157 87.3
Sopen02g017820 Solanum pennellii HOM05D005859 ORTHO05D007576 6.8e-75 284.3 157 88.5
Manes.08G049200 Manihot esculenta HOM05D005859 ORTHO05D007576 8.8e-75 283.9 157 87.3
Gohir.A09G063900 Gossypium hirsutum HOM05D005859 ORTHO05D007576 1.2e-74 283.5 157 86.6
Nitab4.5_0006282g0050 Nicotiana tabacum HOM05D005859 ORTHO05D007576 1.5e-74 283.1 157 87.9
Eucgr.A02021 Eucalyptus grandis HOM05D005859 ORTHO05D007576 2.0e-74 282.7 157 86.0
TWI63G1176 Tripterygium wilfordii HOM05D005859 ORTHO05D007576 2.0e-74 282.7 157 87.3
CiPaw.07G208600 Carya illinoinensis HOM05D005859 ORTHO05D007576 2.6e-74 282.3 157 86.6
Aqoxy7G02813 Aquilegia oxysepala HOM05D005859 ORTHO05D007576 3.4e-74 282.0 157 86.0
Cc09_g05860 Coffea canephora HOM05D005859 ORTHO05D007576 4.4e-74 281.6 156 86.5
Nitab4.5_0003379g0070 Nicotiana tabacum HOM05D005859 ORTHO05D007576 5.7e-74 281.2 157 86.6
MSTRG.12122 Avicennia marina HOM05D005859 ORTHO05D007576 1.3e-73 280.0 157 85.4
TAR625G0738 Trochodendron aralioides HOM05D005859 ORTHO05D007576 1.7e-73 279.6 157 84.1
Migut.A01131 Erythranthe guttata HOM05D005859 ORTHO05D007576 2.2e-73 279.3 157 84.7
SalBow1G3786 Salvia bowleyana HOM05D005859 ORTHO05D007576 2.2e-73 279.3 157 86.6
Lj2P347T15 Lonicera japonica HOM05D005859 ORTHO05D007576 2.8e-73 278.9 157 86.6
HPP92_010546 Vanilla planifolia HOM05D005859 ORTHO05D007576 3.7e-73 278.5 157 83.4
Carub.0006s2269 Capsella rubella HOM05D005859 ORTHO05D007576 4.8e-73 278.1 158 86.1
AL6G36490 Arabidopsis lyrata HOM05D005859 ORTHO05D007576 6.3e-73 277.7 158 86.1
AT5G24840 Arabidopsis thaliana HOM05D005859 ORTHO05D007576 6.3e-73 277.7 158 86.7
CSS0002423 Camellia sinensis var. sinensis HOM05D005859 ORTHO05D007576 6.3e-73 277.7 157 86.6
CSS0037116 Camellia sinensis var. sinensis HOM05D005859 ORTHO05D007576 6.3e-73 277.7 157 86.6
Oeu056039.1 Olea europaea HOM05D005859 ORTHO05D007576 8.3e-73 277.3 157 84.7
Aa31LG11G4050 Aethionema arabicum HOM05D005859 ORTHO05D007576 1.1e-72 276.9 157 86.0
BolC7t44822H Brassica oleracea HOM05D005859 ORTHO05D008158 1.4e-72 276.6 158 86.1
BcaB04g19801 Brassica carinata HOM05D005859 ORTHO05D007576 2.4e-72 275.8 158 84.8
A06p35610 Brassica napus HOM05D005859 ORTHO05D007576 2.4e-72 275.8 158 86.1
C07p42930 Brassica napus HOM05D005859 ORTHO05D008158 2.4e-72 275.8 158 86.1
MBI07_g41262_MAGBIO Magnolia biondii HOM05D005859 ORTHO05D007576 4.1e-72 275.0 158 83.5
SGA_v2.0_scaffold104G30176 Striga asiatica HOM05D005859 ORTHO05D007576 4.1e-72 275.0 157 83.4
Thhalv10004821m.g Eutrema salsugineum HOM05D005859 ORTHO05D007576 5.4e-72 274.6 158 84.8
CARHR188610 Cardamine hirsuta HOM05D005859 ORTHO05D007576 9.1e-72 273.9 158 84.8
Sp2g22610 Schrenkiella parvula HOM05D005859 ORTHO05D007576 9.1e-72 273.9 158 85.4
Zm00001eb208790 Zea mays HOM05D005859 ORTHO05D007576 1.2e-71 273.5 157 84.1
CSS0022235 Camellia sinensis var. sinensis HOM05D005859 ORTHO05D007576 2.0e-71 272.7 161 82.6
HPP92_010527 Vanilla planifolia HOM05D005859 ORTHO05D007576 1.3e-70 270.0 154 82.5
PSO063G7086 Papaver somniferum HOM05D005859 ORTHO05D007576 2.9e-70 268.9 157 82.8
BcaC04g23549 Brassica carinata HOM05D005859 ORTHO05D007576 7.2e-69 264.2 159 81.8
unitig_21.g20313 Utricularia gibba HOM05D005859 ORTHO05D007576 7.2e-69 264.2 158 80.4
Peaxi162Scf00149g00014 Petunia axillaris HOM05D005859 ORTHO05D007576 3.4e-66 255.4 155 81.3
SEGI_16955 Sequoiadendron giganteum HOM05D005859 ORTHO05D007576 9.8e-66 253.8 157 75.8
ATR0697G154 Amborella trichopoda HOM05D005859 ORTHO05D007576 4.9e-65 251.5 156 76.3
Mapoly0026s0057 Marchantia polymorpha HOM05D005859 ORTHO05D007576 9.2e-64 247.3 161 72.7
MD15G1100000 Malus domestica HOM05D005859 ORTHO05D007576 1.6e-63 246.5 157 78.3
Pp3c24_9600 Physcomitrium patens HOM05D005859 ORTHO05D007576 2.7e-63 245.7 157 73.2
SMO358G0125 Selaginella moellendorffii HOM05D005859 ORTHO05D007576 5.6e-61 238.0 157 70.7
AagrBONN_evm.TU.Sc2ySwM_344.1368 Anthoceros agrestis HOM05D005859 ORTHO05D007576 7.3e-61 237.7 157 72.6
CBR_g63067 Chara braunii HOM05D005859 ORTHO05D007576 9.5e-61 237.3 157 70.7
Cre07.g314550 Chlamydomonas reinhardtii HOM05D005859 ORTHO05D007576 2.0e-55 219.5 159 62.9
BolC9t53628H Brassica oleracea HOM05D005859 ORTHO05D007576 9.5e-53 210.7 118 83.1
AUR62018819 Chenopodium quinoa HOM05D005859 ORTHO05D007576 6.2e-52 208.0 157 67.5
HanXRQChr14g0440281 Helianthus annuus HOM05D005859 ORTHO05D007576 8.0e-52 207.6 103 98.1
CSS0033509 Camellia sinensis var. sinensis HOM05D005859 ORTHO05D007576 3.1e-51 205.7 110 88.2
HPP92_010638 Vanilla planifolia HOM05D005859 ORTHO05D007576 2.0e-50 203.0 117 79.5
GSVIVG01035552001 Vitis vinifera HOM05D005859 ORTHO05D007576 2.9e-49 199.1 152 70.4
CSS0005155 Camellia sinensis var. sinensis HOM05D005859 ORTHO05D007576 4.9e-49 198.4 162 66.7
MCO01G481 Micromonas commoda HOM05D005859 ORTHO05D007576 3.2e-48 195.7 156 59.6
PRCOL_00003713 Prasinoderma coloniale HOM05D005859 ORTHO05D007576 9.5e-45 184.1 157 58.0
HPP92_010585 Vanilla planifolia HOM05D005859 ORTHO05D007576 9.5e-45 184.1 101 88.1
Dinv07265 Davidia involucrata HOM05D005859 ORTHO05D007576 4.7e-44 181.8 98 89.8
HPP92_010538 Vanilla planifolia HOM05D005859 ORTHO05D007576 8.1e-44 181.0 103 79.6
CDE05G2856 Ceratophyllum demersum HOM05D005859 ORTHO05D007576 1.1e-43 180.6 97 87.6
Haze_26141 Corylus avellana HOM05D005859 ORTHO05D007576 9.8e-42 174.1 156 50.0
CSS0020153 Camellia sinensis var. sinensis HOM05D005859 ORTHO05D007576 1.4e-40 170.2 96 84.4
CSS0049229 Camellia sinensis var. sinensis HOM05D005859 ORTHO05D007576 2.7e-39 166.0 161 57.1
CSS0043283 Camellia sinensis var. sinensis HOM05D005859 ORTHO05D007576 1.3e-38 163.7 137 62.0
HPP92_010304 Vanilla planifolia HOM05D005859 ORTHO05D007576 1.7e-38 163.3 116 70.7
CSS0012487 Camellia sinensis var. sinensis HOM05D005859 ORTHO05D007576 3.6e-36 155.6 92 82.6
Os06g0236900 Oryza sativa ssp. japonica HOM05D005859 ORTHO05D007576 3.5e-31 139.0 79 81.0
BraA06t26486Z Brassica rapa HOM05D000880 ORTHO05D008158 9.9e-18 94.4 55 89.1
C09p07080 Brassica napus HOM05D000880 ORTHO05D008158 1.1e-16 90.9 56 82.1
HPP92_010586 Vanilla planifolia HOM05D005859 ORTHO05D007576 3.9e-14 82.4 49 73.5
A09p06400 Brassica napus HOM05D005859 ORTHO05D007576 1.1e-13 80.9 48 75.0
ATR1096G015 Amborella trichopoda HOM05D005859 ORTHO05D007576 2.1e-12 76.6 50 64.0
CBR_g38752 Chara braunii HOM05D005695 ORTHO05D007810 1.6e-07 60.5 164 25.6
Cc05_g03930 Coffea canephora HOM05D005695 ORTHO05D007810 1.8e-06 57.0 137 29.2
Pp3c19_7240 Physcomitrium patens HOM05D005695 ORTHO05D007810 3.9e-06 55.8 109 30.3
Pp3c18_9830 Physcomitrium patens HOM05D005695 ORTHO05D007810 6.7e-06 55.1 161 26.1
Mapoly0006s0284 Marchantia polymorpha HOM05D005695 ORTHO05D007810 8.7e-06 54.7 161 23.0
PSO782G5257 Papaver somniferum HOM05D005695 ORTHO05D007810 8.7e-06 54.7 107 29.9


User provided reference genes

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