Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr07g0185771 Helianthus annuus HOM05D007163 ORTHO05D034826 1.3e-108 396.4 192 100.0
HanXRQChr12g0386091 Helianthus annuus HOM05D007163 ORTHO05D000587 2.5e-88 328.9 165 97.0
HanXRQChr09g0256071 Helianthus annuus HOM05D007163 ORTHO05D009213 4.0e-78 295.0 154 94.2
ECA232G3833 Erigeron canadensis HOM05D007163 ORTHO05D009213 1.9e-64 249.6 155 80.0
Lsat_1_v5_gn_4_185401 Lactuca sativa HOM05D007163 ORTHO05D009213 4.1e-62 241.9 155 76.8
CSS0007697 Camellia sinensis var. sinensis HOM05D007163 ORTHO05D009213 6.3e-55 218.0 156 69.9
Actinidia36181 Actinidia chinensis HOM05D007163 ORTHO05D009213 1.4e-54 216.9 155 70.3
Dinv25673 Davidia involucrata HOM05D007163 ORTHO05D009213 3.4e-53 212.2 156 67.9
Rhsim10G0008600 Rhododendron simsii HOM05D007163 ORTHO05D009213 2.2e-52 209.5 155 67.7
Haze_14841 Corylus avellana HOM05D007163 ORTHO05D009213 6.5e-52 208.0 169 63.9
TAR374G1101 Trochodendron aralioides HOM05D007163 ORTHO05D009213 1.1e-51 207.2 156 66.7
vmacro05939 Vaccinium macrocarpon HOM05D007163 ORTHO05D009213 1.1e-51 207.2 151 70.9
DCAR_021768 Daucus carota HOM05D007163 ORTHO05D009213 1.4e-51 206.8 156 65.4
HanXRQChr17g0551201 Helianthus annuus HOM05D037614 ORTHO05D034826 1.4e-51 206.8 99 97.0
QL02p071962 Quercus lobata HOM05D007163 ORTHO05D009213 1.4e-51 206.8 156 66.7
Lju41C50G12 Lonicera japonica HOM05D007163 ORTHO05D009213 1.9e-51 206.5 156 66.7
arahy.Tifrunner.gnm1.ann1.P8AP0Y Arachis hypogaea HOM05D007163 ORTHO05D009213 2.5e-51 206.1 155 66.5
arahy.Tifrunner.gnm1.ann1.P5B8TA Arachis hypogaea HOM05D007163 ORTHO05D009213 3.2e-51 205.7 155 67.1
GSVIVG01001816001 Vitis vinifera HOM05D007163 ORTHO05D009213 9.4e-51 204.1 156 66.0
FAN02G2995 Fragaria x ananassa HOM05D007163 ORTHO05D009213 1.6e-50 203.4 156 64.1
RcHm_v2.0_Chr2g0174941 Rosa chinensis HOM05D007163 ORTHO05D009213 1.6e-50 203.4 156 64.1
Atru.chr6.2521 Acer truncatum HOM05D007163 ORTHO05D009213 7.9e-50 201.1 155 65.8
RcHm_v2.0_Chr2g0174871 Rosa chinensis HOM05D007163 ORTHO05D009213 7.9e-50 201.1 155 63.9
CAN.G1965.14 Capsicum annuum HOM05D007163 ORTHO05D009213 1.0e-49 200.7 156 64.1
CiPaw.04G034900 Carya illinoinensis HOM05D007163 ORTHO05D009213 1.0e-49 200.7 156 66.0
COL.COLO4_08751 Corchorus olitorius HOM05D007163 ORTHO05D009213 1.0e-49 200.7 156 67.3
FvH4_6g53090 Fragaria vesca HOM05D007163 ORTHO05D009213 1.0e-49 200.7 156 62.8
FAN09G2097 Fragaria x ananassa HOM05D007163 ORTHO05D009213 1.0e-49 200.7 156 62.8
FAN14G4233 Fragaria x ananassa HOM05D007163 ORTHO05D009213 1.0e-49 200.7 156 62.8
Glyma.19G087600 Glycine max HOM05D007163 ORTHO05D009213 1.0e-49 200.7 155 65.8
Thecc.04G030600 Theobroma cacao HOM05D007163 ORTHO05D009213 1.4e-49 200.3 156 66.0
Duzib264G0233 Durio zibethinus HOM05D007163 ORTHO05D009213 2.3e-49 199.5 156 65.4
Migut.H00010 Erythranthe guttata HOM05D007163 ORTHO05D009213 2.3e-49 199.5 156 64.7
Gohir.A05G340200 Gossypium hirsutum HOM05D007163 ORTHO05D009213 3.0e-49 199.1 156 65.4
Gohir.D04G078700 Gossypium hirsutum HOM05D007163 ORTHO05D009213 3.0e-49 199.1 156 65.4
Gorai.012G088600 Gossypium raimondii HOM05D007163 ORTHO05D009213 3.0e-49 199.1 156 65.4
Lalb_Chr14g0363061 Lupinus albus HOM05D007163 ORTHO05D009213 3.0e-49 199.1 155 64.5
Nn3g16518 Nelumbo nucifera HOM05D007163 ORTHO05D009213 3.0e-49 199.1 155 65.2
Peaxi162Scf00700g00151 Petunia axillaris HOM05D007163 ORTHO05D009213 5.1e-49 198.4 156 62.8
Nitab4.5_0006819g0080 Nicotiana tabacum HOM05D007163 ORTHO05D009213 6.7e-49 198.0 156 63.5
Solyc03g005080.4 Solanum lycopersicum HOM05D007163 ORTHO05D009213 6.7e-49 198.0 156 64.1
Sopen03g001080 Solanum pennellii HOM05D007163 ORTHO05D009213 6.7e-49 198.0 156 64.1
TPR.G38344 Trifolium pratense HOM05D007163 ORTHO05D009213 1.5e-48 196.8 155 62.6
Prupe.3G303000 Prunus persica HOM05D007163 ORTHO05D009213 2.0e-48 196.4 156 66.0
Cpa.g.sc130.4 Carica papaya HOM05D007163 ORTHO05D009213 2.6e-48 196.1 157 64.3
MBI11_g06765_MAGBIO Magnolia biondii HOM05D007163 ORTHO05D009213 4.4e-48 195.3 159 62.9
PGSC0003DMG400013429 Solanum tuberosum HOM05D007163 ORTHO05D009213 5.7e-48 194.9 156 63.5
SGA_v2.0_scaffold18G08218 Striga asiatica HOM05D007163 ORTHO05D009213 9.7e-48 194.1 154 64.3
MD17G1014800 Malus domestica HOM05D007163 ORTHO05D009213 1.7e-47 193.4 156 64.1
Medtr7g031310 Medicago truncatula HOM05D007163 ORTHO05D009213 1.7e-47 193.4 155 60.0
SalBow1G0436 Salvia bowleyana HOM05D007163 ORTHO05D009213 2.8e-47 192.6 156 63.5
Lj1g0003964 Lotus japonicus HOM05D007163 ORTHO05D009213 3.7e-47 192.2 155 61.3
Aa31LG11G15010 Aethionema arabicum HOM05D007163 ORTHO05D009213 4.8e-47 191.8 155 60.6
Eucgr.J02313 Eucalyptus grandis HOM05D007163 ORTHO05D009213 4.8e-47 191.8 156 61.5
Manes.15G158600 Manihot esculenta HOM05D007163 ORTHO05D009213 4.8e-47 191.8 156 65.4
MD17G1014700 Malus domestica HOM05D007163 ORTHO05D009213 8.2e-47 191.0 156 63.5
Phvul.001G095800 Phaseolus vulgaris HOM05D007163 ORTHO05D009213 8.2e-47 191.0 155 63.2
Cc07_g00620 Coffea canephora HOM05D007163 ORTHO05D009213 1.1e-46 190.7 157 60.5
Ciclev10014964m.g Citrus clementina HOM05D007163 ORTHO05D009213 2.4e-46 189.5 156 64.7
TWI56G0022 Tripterygium wilfordii HOM05D007163 ORTHO05D009213 2.4e-46 189.5 156 61.5
AL6G24890 Arabidopsis lyrata HOM05D007163 ORTHO05D009213 3.1e-46 189.1 155 59.4
AT5G14220 Arabidopsis thaliana HOM05D007163 ORTHO05D009213 4.1e-46 188.7 155 60.0
ClCG11G006970 Citrullus lanatus HOM05D007163 ORTHO05D009213 9.1e-46 187.6 150 64.0
VMungo1383G0219 Vigna mungo HOM05D007163 ORTHO05D009213 9.1e-46 187.6 155 61.3
Thhalv10013706m.g Eutrema salsugineum HOM05D007163 ORTHO05D009213 1.5e-45 186.8 156 60.3
THA.LOC104802380 Tarenaya hassleriana HOM05D007163 ORTHO05D009213 1.5e-45 186.8 156 60.9
ATR0686G011 Amborella trichopoda HOM05D007163 ORTHO05D009213 3.4e-45 185.7 159 57.9
BcaB08g36967 Brassica carinata HOM05D007163 ORTHO05D009213 3.4e-45 185.7 155 59.4
CANSAT64G2763 Cannabis sativa HOM05D007163 ORTHO05D009213 3.4e-45 185.7 156 60.3
Sc03g0006730 Simmondsia chinensis HOM05D007163 ORTHO05D009213 3.4e-45 185.7 155 61.3
BcaC04g19052 Brassica carinata HOM05D007163 ORTHO05D009213 4.5e-45 185.3 155 60.0
C09p62940 Brassica napus HOM05D007163 ORTHO05D009213 4.5e-45 185.3 155 60.0
BolC9t59131H Brassica oleracea HOM05D007163 ORTHO05D009213 4.5e-45 185.3 155 60.0
Potri.001G333500 Populus trichocarpa HOM05D007163 ORTHO05D009213 4.5e-45 185.3 156 61.5
Ah.11g045340 Amaranthus hybridus HOM05D007163 ORTHO05D009213 5.9e-45 184.9 155 58.7
Carub.0006s1242 Capsella rubella HOM05D007163 ORTHO05D009213 7.7e-45 184.5 155 60.0
CARHR199120 Cardamine hirsuta HOM05D007163 ORTHO05D009213 1.0e-44 184.1 155 59.4
CDE08G0784 Ceratophyllum demersum HOM05D007163 ORTHO05D009213 1.0e-44 184.1 159 56.6
PSO063G0972 Papaver somniferum HOM05D007163 ORTHO05D009213 2.2e-44 183.0 158 60.8
A10p24250 Brassica napus HOM05D007163 ORTHO05D009213 2.9e-44 182.6 155 58.7
BraA10t44490Z Brassica rapa HOM05D007163 ORTHO05D009213 2.9e-44 182.6 155 58.7
CsaV3_6G001080 Cucumis sativus L. HOM05D007163 ORTHO05D009213 3.8e-44 182.2 150 62.0
MELO3C008208.2 Cucumis melo HOM05D007163 ORTHO05D009213 5.0e-44 181.8 150 62.0
AUR62037751 Chenopodium quinoa HOM05D007163 ORTHO05D009213 1.4e-43 180.3 155 60.6
Sp6g29810 Schrenkiella parvula HOM05D007163 ORTHO05D009213 1.9e-43 179.9 155 58.1
Sabra16G0214800 Salix brachista HOM05D007163 ORTHO05D009213 3.2e-43 179.1 156 60.3
Sed0015727 Sechium edule HOM05D007163 ORTHO05D009213 3.2e-43 179.1 150 61.3
Aqoxy5G03466 Aquilegia oxysepala HOM05D007163 ORTHO05D009213 4.2e-43 178.7 157 59.2
EL10Ac2g03213 Beta vulgaris HOM05D007163 ORTHO05D009213 3.6e-42 175.6 166 54.8
unitig_0.g1943 Utricularia gibba HOM05D007163 ORTHO05D009213 2.3e-41 172.9 156 56.4
Nitab4.5_0000559g0210 Nicotiana tabacum HOM05D007163 ORTHO05D009213 1.3e-39 167.2 156 55.8
Os04g0490100 Oryza sativa ssp. japonica HOM05D007163 ORTHO05D009213 1.3e-39 167.2 172 50.6
Zm00001eb078900 Zea mays HOM05D007163 ORTHO05D009213 7.0e-38 161.4 160 51.9
Psat3g180240 Pisum sativum HOM05D007163 ORTHO05D009213 8.0e-34 147.9 92 73.9
Ca_27151_v3 Cicer arietinum L. HOM05D007163 ORTHO05D009213 5.2e-33 145.2 92 71.7
Pp3c1_4180 Physcomitrium patens HOM05D007163 ORTHO05D009213 4.4e-32 142.1 155 45.8
SMO165G0055 Selaginella moellendorffii HOM05D007163 ORTHO05D009213 4.8e-31 138.7 159 45.9
AagrBONN_evm.TU.Sc2ySwM_362.138 Anthoceros agrestis HOM05D007163 ORTHO05D009213 8.2e-31 137.9 155 46.5
Actinidia05923 Actinidia chinensis HOM05D007163 ORTHO05D009213 1.4e-30 137.1 155 51.6
COL.COLO4_08747 Corchorus olitorius HOM05D007163 ORTHO05D034826 3.5e-29 132.5 134 55.2
HanXRQChr07g0185961 Helianthus annuus HOM05D007163 ORTHO05D009213 2.1e-26 123.2 64 95.3
AUR62018255 Chenopodium quinoa HOM05D007163 ORTHO05D009213 1.2e-21 107.5 68 76.5
CBR_g44281 Chara braunii HOM05D007163 ORTHO05D009213 1.7e-20 103.6 159 37.1
HanXRQChr09g0274841 Helianthus annuus HOM05D037614 ORTHO05D224950 1.8e-14 83.6 58 69.0
HanXRQChr17g0551211 Helianthus annuus HOM05D000766 ORTHO05D000587 4.5e-13 79.0 39 100.0
MCO14G379 Micromonas commoda HOM05D006046 ORTHO05D007580 3.2e-06 56.2 164 28.0
Mapoly0001s0469 Marchantia polymorpha HOM05D006046 ORTHO05D007580 7.0e-06 55.1 155 29.0


User provided reference genes

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