Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr06g0183211 Helianthus annuus HOM05D005156 ORTHO05D006710 3.1e-215 751.5 381 100.0
ECA238G2265 Erigeron canadensis HOM05D005156 ORTHO05D006710 9.9e-153 543.9 312 90.1
Hma1.2p1_1115F.1_g258845 Hydrangea macrophylla HOM05D005156 ORTHO05D006710 1.3e-128 463.8 311 77.2
Lsat_1_v5_gn_2_29420 Lactuca sativa HOM05D005156 ORTHO05D006710 1.9e-127 459.9 314 78.0
CSS0001612 Camellia sinensis var. sinensis HOM05D005156 ORTHO05D006710 4.2e-127 458.8 311 74.6
CSS0030488 Camellia sinensis var. sinensis HOM05D005156 ORTHO05D006710 5.5e-127 458.4 311 74.3
Actinidia16358 Actinidia chinensis HOM05D005156 ORTHO05D006710 9.3e-127 457.6 311 74.6
CiPaw.13G153000 Carya illinoinensis HOM05D005156 ORTHO05D006710 3.7e-123 445.7 311 73.0
TAR626G1548 Trochodendron aralioides HOM05D005156 ORTHO05D006710 4.8e-123 445.3 311 74.0
Cfa009832 Carpinus fangiana HOM05D005156 ORTHO05D006710 6.9e-122 441.4 311 72.7
Cc01_g05890 Coffea canephora HOM05D005156 ORTHO05D006710 9.0e-122 441.0 311 72.7
RcHm_v2.0_Chr5g0050911 Rosa chinensis HOM05D005156 ORTHO05D006710 1.2e-121 440.7 310 73.5
Atru.chr3.2617 Acer truncatum HOM05D005156 ORTHO05D006710 4.5e-121 438.7 310 71.9
CANSAT54G2883 Cannabis sativa HOM05D005156 ORTHO05D006710 4.5e-121 438.7 310 72.3
Potri.001G254000 Populus trichocarpa HOM05D005156 ORTHO05D006710 7.7e-121 438.0 310 71.9
FvH4_3g28170 Fragaria vesca HOM05D005156 ORTHO05D006710 2.9e-120 436.0 310 72.3
MD11G1196200 Malus domestica HOM05D005156 ORTHO05D006710 2.9e-120 436.0 310 72.3
FAN16G2156 Fragaria x ananassa HOM05D005156 ORTHO05D006710 3.8e-120 435.6 310 71.9
PSO210G1653 Papaver somniferum HOM05D005156 ORTHO05D006710 8.5e-120 434.5 310 71.0
Sc16g0011170 Simmondsia chinensis HOM05D005156 ORTHO05D006710 8.5e-120 434.5 311 72.3
Cpa.g.sc84.13 Carica papaya HOM05D005156 ORTHO05D006710 1.4e-119 433.7 311 71.4
Oeu001490.1 Olea europaea HOM05D005156 ORTHO05D006710 1.9e-119 433.3 311 73.0
MSTRG.18451 Avicennia marina HOM05D005156 ORTHO05D006710 7.2e-119 431.4 311 72.0
Aqoxy8s002 Aquilegia oxysepala HOM05D005156 ORTHO05D006710 9.4e-119 431.0 311 71.1
Lj3g0017854 Lotus japonicus HOM05D005156 ORTHO05D006710 1.6e-118 430.3 312 71.5
GSVIVG01037376001 Vitis vinifera HOM05D005156 ORTHO05D006710 2.7e-118 429.5 312 71.5
Rhsim13G0216600 Rhododendron simsii HOM05D005156 ORTHO05D006710 1.8e-117 426.8 313 71.6
Eucgr.J00726 Eucalyptus grandis HOM05D005156 ORTHO05D006710 2.3e-117 426.4 311 70.1
PSO210G0499 Papaver somniferum HOM05D005156 ORTHO05D006710 2.3e-117 426.4 310 69.7
Prupe.4G258300 Prunus persica HOM05D005156 ORTHO05D006710 2.5e-116 422.9 310 71.3
MELO3C015153.2 Cucumis melo HOM05D005156 ORTHO05D006710 3.3e-116 422.5 313 69.3
Lalb_Chr10g0094741 Lupinus albus HOM05D005156 ORTHO05D006710 3.3e-116 422.5 312 70.2
CsaV3_1G043140 Cucumis sativus L. HOM05D005156 ORTHO05D006710 1.3e-115 420.6 313 68.4
Thecc.09G243300 Theobroma cacao HOM05D005156 ORTHO05D006710 1.3e-115 420.6 306 69.9
Gorai.001G136000 Gossypium raimondii HOM05D005156 ORTHO05D006710 2.8e-115 419.5 310 69.0
Ciclev10015838m.g Citrus clementina HOM05D005156 ORTHO05D006710 3.7e-115 419.1 276 75.7
Gohir.A07G121700 Gossypium hirsutum HOM05D005156 ORTHO05D006710 8.2e-115 417.9 310 69.7
Migut.D00644 Erythranthe guttata HOM05D005156 ORTHO05D006710 1.8e-114 416.8 311 72.3
Gohir.D07G126000 Gossypium hirsutum HOM05D005156 ORTHO05D006710 1.8e-114 416.8 310 68.7
PGR119G1881 Punica granatum HOM05D005156 ORTHO05D006710 3.1e-114 416.0 310 68.4
Glyma.09G002700 Glycine max HOM05D005156 ORTHO05D006710 4.1e-114 415.6 313 70.3
Ah.06g194400 Amaranthus hybridus HOM05D005156 ORTHO05D006710 6.9e-114 414.8 316 68.7
HPP92_001936 Vanilla planifolia HOM05D005156 ORTHO05D006710 6.9e-114 414.8 284 73.2
Haze_23195 Corylus avellana HOM05D005156 ORTHO05D006710 4.5e-113 412.1 317 69.4
QL01p017825 Quercus lobata HOM05D005156 ORTHO05D006710 1.0e-112 411.0 311 70.1
TPR.G34160 Trifolium pratense HOM05D005156 ORTHO05D006710 1.0e-112 411.0 312 67.6
Hund21990 Selenicereus undatus HOM05D005156 ORTHO05D006710 1.7e-112 410.2 317 70.0
AL1G58170 Arabidopsis lyrata HOM05D005156 ORTHO05D006710 3.8e-112 409.1 310 68.1
Thhalv10011639m.g Eutrema salsugineum HOM05D005156 ORTHO05D006710 5.0e-112 408.7 310 67.7
BcaC05g27410 Brassica carinata HOM05D005156 ORTHO05D006710 1.1e-111 407.5 310 67.4
BcaB02g11155 Brassica carinata HOM05D005156 ORTHO05D006710 2.5e-111 406.4 307 67.1
Carub.0001s3958 Capsella rubella HOM05D005156 ORTHO05D006710 4.2e-111 405.6 310 67.1
THA.LOC104804468 Tarenaya hassleriana HOM05D005156 ORTHO05D006710 4.2e-111 405.6 311 67.2
BcaC08g43222 Brassica carinata HOM05D005156 ORTHO05D006710 5.5e-111 405.2 310 67.4
PGSC0003DMG400019760 Solanum tuberosum HOM05D005156 ORTHO05D006710 5.5e-111 405.2 308 68.2
CARHR040540 Cardamine hirsuta HOM05D005156 ORTHO05D006710 7.2e-111 404.8 310 67.1
AUR62000172 Chenopodium quinoa HOM05D005156 ORTHO05D006710 7.2e-111 404.8 311 68.2
Phvul.011G080400 Phaseolus vulgaris HOM05D005156 ORTHO05D006710 7.2e-111 404.8 311 67.8
vmacro04002 Vaccinium macrocarpon HOM05D005156 ORTHO05D006710 9.4e-111 404.4 372 60.8
Solyc11g033260.2 Solanum lycopersicum HOM05D005156 ORTHO05D006710 1.6e-110 403.7 307 68.1
A05p20090 Brassica napus HOM05D005156 ORTHO05D006710 2.1e-110 403.3 312 67.3
BraA05t20917Z Brassica rapa HOM05D005156 ORTHO05D006710 2.1e-110 403.3 312 67.3
Nitab4.5_0006419g0030 Nicotiana tabacum HOM05D005156 ORTHO05D006710 2.1e-110 403.3 316 66.8
Peaxi162Scf00473g00218 Petunia axillaris HOM05D005156 ORTHO05D006710 2.7e-110 402.9 342 64.9
Sopen11g015730 Solanum pennellii HOM05D005156 ORTHO05D006710 2.7e-110 402.9 309 67.6
BraA06t23519Z Brassica rapa HOM05D005156 ORTHO05D006710 6.1e-110 401.7 312 67.0
BcaB07g33488 Brassica carinata HOM05D005156 ORTHO05D006710 7.9e-110 401.4 310 66.8
A06p03060 Brassica napus HOM05D005156 ORTHO05D006710 1.0e-109 401.0 312 67.0
AT1G50510 Arabidopsis thaliana HOM05D005156 ORTHO05D006710 1.8e-109 400.2 310 66.8
VMungo1383G1089 Vigna mungo HOM05D005156 ORTHO05D006710 2.3e-109 399.8 312 67.3
ATR0751G133 Amborella trichopoda HOM05D005156 ORTHO05D006710 3.9e-109 399.1 282 72.7
C06p05700 Brassica napus HOM05D005156 ORTHO05D006710 3.9e-109 399.1 310 66.5
EL10Ac4g10175 Beta vulgaris HOM05D005156 ORTHO05D006710 6.7e-109 398.3 308 67.5
Os08g0504400 Oryza sativa ssp. japonica HOM05D005156 ORTHO05D006710 6.7e-109 398.3 290 69.0
Psat7g227760 Pisum sativum HOM05D005156 ORTHO05D006710 6.7e-109 398.3 312 66.7
CAN.G1323.2 Capsicum annuum HOM05D005156 ORTHO05D006710 8.8e-109 397.9 310 66.5
FAN21G2369 Fragaria x ananassa HOM05D005156 ORTHO05D006710 1.1e-108 397.5 310 67.1
C05p33580 Brassica napus HOM05D005156 ORTHO05D006710 2.0e-108 396.7 312 66.0
FAN11G0102 Fragaria x ananassa HOM05D005156 ORTHO05D006710 7.4e-108 394.8 310 66.8
Manes.15G112800 Manihot esculenta HOM05D005156 ORTHO05D006710 7.4e-108 394.8 248 79.0
FAN25G0057 Fragaria x ananassa HOM05D005156 ORTHO05D006710 1.7e-107 393.7 310 66.1
unitig_90.g27461 Utricularia gibba HOM05D005156 ORTHO05D006710 3.7e-107 392.5 311 67.5
AUR62039839 Chenopodium quinoa HOM05D005156 ORTHO05D006710 5.3e-106 388.7 341 62.8
BolC5t32085H Brassica oleracea HOM05D005156 ORTHO05D006710 7.0e-106 388.3 338 60.9
Sp1g37360 Schrenkiella parvula HOM05D005156 ORTHO05D006710 7.0e-106 388.3 310 65.5
Sabra16G0154700 Salix brachista HOM05D005156 ORTHO05D006710 1.3e-104 384.0 280 71.8
Mapoly0048s0046 Marchantia polymorpha HOM05D005156 ORTHO05D006710 4.2e-103 379.0 308 63.6
Sed0002302 Sechium edule HOM05D005156 ORTHO05D006710 5.5e-103 378.6 313 66.5
Aa31LG10G3780 Aethionema arabicum HOM05D005156 ORTHO05D006710 3.6e-102 375.9 301 65.8
arahy.Tifrunner.gnm1.ann1.9TL5ZW Arachis hypogaea HOM05D005156 ORTHO05D006710 3.6e-102 375.9 312 66.3
arahy.Tifrunner.gnm1.ann1.KCM926 Arachis hypogaea HOM05D005156 ORTHO05D006710 6.1e-102 375.2 312 67.0
SMO147G0151 Selaginella moellendorffii HOM05D005156 ORTHO05D006710 3.0e-101 372.9 279 67.0
Ca_12758_v3 Cicer arietinum L. HOM05D005156 ORTHO05D006710 6.7e-101 371.7 339 61.9
ClCG03G012920 Citrullus lanatus HOM05D005156 ORTHO05D006710 8.8e-101 371.3 333 61.0
Pp3c21_8650 Physcomitrium patens HOM05D005156 ORTHO05D006710 1.7e-99 367.1 313 61.7
Lj2C655T2 Lonicera japonica HOM05D005156 ORTHO05D006710 5.3e-98 362.1 275 68.4
Nitab4.5_0002113g0190 Nicotiana tabacum HOM05D005156 ORTHO05D006710 2.0e-97 360.1 248 72.6
CDE12G0606 Ceratophyllum demersum HOM05D005156 ORTHO05D006710 2.2e-96 356.7 241 73.0
DCAR_002091 Daucus carota HOM05D005156 ORTHO05D006710 9.4e-95 351.3 299 62.2
AagrBONN_evm.TU.Sc2ySwM_368.760 Anthoceros agrestis HOM05D005156 ORTHO05D006710 1.6e-94 350.5 276 63.8
Aqoxy4G00402 Aquilegia oxysepala HOM05D005156 ORTHO05D006710 2.7e-94 349.7 289 65.7
CBR_g12801 Chara braunii HOM05D005156 ORTHO05D006710 5.2e-93 345.5 276 64.1
Zm00001eb251060 Zea mays HOM05D005156 ORTHO05D006710 8.8e-93 344.7 249 67.5
SHI21395 Sapria himalayana HOM05D005156 ORTHO05D006710 3.7e-91 339.3 270 65.2
Dinv22149 Davidia involucrata HOM05D005156 ORTHO05D006710 1.4e-90 337.4 217 78.3
MCO15G168 Micromonas commoda HOM05D005156 ORTHO05D006710 5.9e-89 332.0 322 54.0
SGA_v2.0_scaffold29G12276 Striga asiatica HOM05D005156 ORTHO05D006710 1.1e-87 327.8 211 80.1
PRCOL_00003626 Prasinoderma coloniale HOM05D005156 ORTHO05D006710 8.3e-83 311.6 276 54.7
MBI15_g27827_MAGBIO Magnolia biondii HOM05D005156 ORTHO05D006710 3.5e-81 306.2 196 77.6
Lj2C684T3 Lonicera japonica HOM05D005156 ORTHO05D006710 1.1e-79 301.2 208 74.0
Hma1.2p1_2309F.1_g319520 Hydrangea macrophylla HOM05D005156 ORTHO05D006710 2.3e-77 293.5 184 79.3
Medtr4g031220 Medicago truncatula HOM05D005156 ORTHO05D006710 2.3e-77 293.5 234 66.2
Cre02.g144000 Chlamydomonas reinhardtii HOM05D005156 ORTHO05D006710 2.0e-76 290.4 248 58.1
SMO273G0012 Selaginella moellendorffii HOM05D005156 ORTHO05D006710 1.1e-66 258.1 185 69.2
BcaB02g11038 Brassica carinata HOM05D005156 ORTHO05D006710 3.5e-65 253.1 203 67.0
Cfa025164 Carpinus fangiana HOM05D005156 ORTHO05D006710 3.1e-61 240.0 282 45.7
BcaB01g01392 Brassica carinata HOM05D005156 ORTHO05D006710 2.2e-59 233.8 202 64.4
Nn1g08054 Nelumbo nucifera HOM05D005156 ORTHO05D006710 8.6e-56 221.9 143 74.1
Haze_26247 Corylus avellana HOM05D005156 ORTHO05D006710 7.3e-47 192.2 284 42.3
Nn1g08053 Nelumbo nucifera HOM05D005156 ORTHO05D006710 3.6e-46 189.9 149 69.8
COL.COLO4_04116 Corchorus olitorius HOM05D005156 ORTHO05D006710 1.3e-40 171.4 144 66.7
Aqoxy1G04277 Aquilegia oxysepala HOM05D005156 ORTHO05D006710 7.1e-26 122.5 101 66.3
Oeu016690.1 Olea europaea HOM05D005156 ORTHO05D006710 6.0e-25 119.4 224 36.6
ATR0585G005 Amborella trichopoda HOM05D005156 ORTHO05D006710 2.5e-23 114.0 86 69.8
Medtr4g031235 Medicago truncatula HOM05D005156 ORTHO05D006710 4.3e-23 113.2 81 67.9
SalBow6G0988 Salvia bowleyana HOM05D005156 ORTHO05D006710 4.3e-23 113.2 78 70.5
SMO164G0249 Selaginella moellendorffii HOM05D005156 ORTHO05D006710 2.6e-20 104.0 118 54.2
EL10Ac8g19800 Beta vulgaris HOM05D005156 ORTHO05D006710 1.9e-18 97.8 94 55.3
SMO147G0118 Selaginella moellendorffii HOM05D005156 ORTHO05D006710 1.9e-18 97.8 183 37.2
MELO3C033715.2 Cucumis melo HOM05D005156 ORTHO05D006710 1.6e-17 94.7 61 77.0
SMO147G0310 Selaginella moellendorffii HOM05D000066 ORTHO05D373802 7.9e-17 92.4 85 56.5
MELO3C034654.2 Cucumis melo HOM05D005156 ORTHO05D006710 1.0e-16 92.0 62 77.4
MELO3C034160.2 Cucumis melo HOM05D005156 ORTHO05D006710 3.9e-16 90.1 62 72.6
SEGI_37101 Sequoiadendron giganteum HOM05D005156 ORTHO05D006710 6.7e-16 89.4 96 57.3
MELO3C030656.2 Cucumis melo HOM05D005156 ORTHO05D006710 8.7e-16 89.0 62 74.2
MELO3C030457.2 Cucumis melo HOM05D005156 ORTHO05D006710 1.1e-13 82.0 58 75.9
EL10Ac3g06833 Beta vulgaris HOM05D005156 ORTHO05D006710 1.4e-13 81.6 81 45.7
MELO3C016526.2 Cucumis melo HOM05D005156 ORTHO05D006710 9.0e-13 79.0 55 74.5
EL10Ac2g04378 Beta vulgaris HOM05D005156 ORTHO05D006710 2.0e-12 77.8 99 40.4
EL10Ac8g20129 Beta vulgaris HOM05D005156 ORTHO05D000004 1.4e-10 71.6 85 48.2
Hma1.2p1_1115F.1_g258870 Hydrangea macrophylla HOM05D005156 ORTHO05D006710 1.9e-10 71.2 37 86.5
EL10Ac2g02892 Beta vulgaris HOM05D005156 ORTHO05D039042 1.6e-09 68.2 43 74.4
EL10As2g23197 Beta vulgaris HOM05D005156 ORTHO05D039042 1.8e-08 64.7 41 75.6
EL10Ac9g22728 Beta vulgaris HOM05D005156 ORTHO05D000004 6.7e-08 62.8 37 78.4
Rhsim05G0077000 Rhododendron simsii HOM05D003003 ORTHO05D008343 6.7e-08 62.8 40 80.0
SMO147G0023 Selaginella moellendorffii HOM05D005156 ORTHO05D376049 6.3e-06 56.2 37 62.2


User provided reference genes

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