Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr06g0168681 Helianthus annuus HOM05D006185 ORTHO05D007572 5.0e-128 461.1 226 100.0
ECA236G2592 Erigeron canadensis HOM05D006185 ORTHO05D007572 1.6e-86 323.2 220 72.7
ECA236G4868 Erigeron canadensis HOM05D006185 ORTHO05D007572 2.5e-79 299.3 187 73.3
HanXRQChr04g0125931 Helianthus annuus HOM05D006185 ORTHO05D007572 1.1e-77 293.9 188 72.9
Lsat_1_v5_gn_8_85701 Lactuca sativa HOM05D006185 ORTHO05D007572 1.8e-77 293.1 189 71.4
Lsat_1_v5_gn_8_85721 Lactuca sativa HOM05D006185 ORTHO05D007572 4.4e-76 288.5 186 71.5
TWI63G0883 Tripterygium wilfordii HOM05D006185 ORTHO05D007572 8.7e-72 274.2 181 67.4
Peaxi162Scf00928g00132 Petunia axillaris HOM05D006185 ORTHO05D007572 1.1e-71 273.9 184 67.9
PGR044G1997 Punica granatum HOM05D006185 ORTHO05D007572 1.1e-71 273.9 183 66.7
Eucgr.C03305 Eucalyptus grandis HOM05D006185 ORTHO05D007572 4.3e-71 271.9 188 64.9
Nitab4.5_0004234g0030 Nicotiana tabacum HOM05D006185 ORTHO05D007572 4.3e-71 271.9 184 67.9
Oeu062247.1 Olea europaea HOM05D006185 ORTHO05D007572 5.6e-71 271.6 186 66.1
Gohir.A05G034500 Gossypium hirsutum HOM05D006185 ORTHO05D007572 9.6e-71 270.8 188 63.3
CiPaw.03G203800 Carya illinoinensis HOM05D006185 ORTHO05D007572 1.3e-70 270.4 187 65.2
Dinv25540 Davidia involucrata HOM05D006185 ORTHO05D007572 1.3e-70 270.4 184 67.4
SGA_v2.0_scaffold296G47554 Striga asiatica HOM05D006185 ORTHO05D007572 2.8e-70 269.2 182 67.0
Nitab4.5_0000073g0300 Nicotiana tabacum HOM05D006185 ORTHO05D007572 3.6e-70 268.9 184 67.4
CAN.G1661.20 Capsicum annuum HOM05D006185 ORTHO05D007572 4.8e-70 268.5 188 64.9
Cc06_g12450 Coffea canephora HOM05D006185 ORTHO05D007572 6.2e-70 268.1 188 66.5
EL10Ac8g19027 Beta vulgaris HOM05D006185 ORTHO05D007572 8.1e-70 267.7 188 64.4
ClCG03G014940 Citrullus lanatus HOM05D006185 ORTHO05D007572 8.1e-70 267.7 185 64.9
Gohir.D05G035900 Gossypium hirsutum HOM05D006185 ORTHO05D007572 8.1e-70 267.7 188 62.8
Gorai.009G036500 Gossypium raimondii HOM05D006185 ORTHO05D007572 8.1e-70 267.7 188 62.8
CSS0016181 Camellia sinensis var. sinensis HOM05D006185 ORTHO05D007572 1.8e-69 266.5 187 66.3
Sc06g0006920 Simmondsia chinensis HOM05D006185 ORTHO05D007572 1.8e-69 266.5 184 64.7
CSS0028340 Camellia sinensis var. sinensis HOM05D006185 ORTHO05D007572 3.1e-69 265.8 190 64.7
SalBow5G0266 Salvia bowleyana HOM05D006185 ORTHO05D007572 3.1e-69 265.8 183 66.7
Atru.chr7.1733 Acer truncatum HOM05D006185 ORTHO05D007572 1.2e-68 263.8 183 66.1
CsaV3_1G041210 Cucumis sativus L. HOM05D006185 ORTHO05D007572 2.0e-68 263.1 185 62.2
Sopen12g004130 Solanum pennellii HOM05D006185 ORTHO05D007572 2.0e-68 263.1 187 65.8
CANSAT56G1413 Cannabis sativa HOM05D006185 ORTHO05D007572 2.6e-68 262.7 184 64.7
Ca_09309_v3 Cicer arietinum L. HOM05D006185 ORTHO05D007572 2.6e-68 262.7 184 62.5
Manes.03G041800 Manihot esculenta HOM05D006185 ORTHO05D007572 2.6e-68 262.7 188 64.4
Solyc12g009180.2 Solanum lycopersicum HOM05D006185 ORTHO05D007572 2.6e-68 262.7 187 65.2
Migut.L01579 Erythranthe guttata HOM05D006185 ORTHO05D007572 4.5e-68 261.9 184 62.5
Potri.006G140000 Populus trichocarpa HOM05D006185 ORTHO05D007572 5.8e-68 261.5 184 65.2
COL.COLO4_18072 Corchorus olitorius HOM05D006185 ORTHO05D007572 7.6e-68 261.2 188 62.2
Gorai.010G090200 Gossypium raimondii HOM05D006185 ORTHO05D007572 7.6e-68 261.2 187 64.2
Lj7A688T82 Lonicera japonica HOM05D006185 ORTHO05D007572 7.6e-68 261.2 188 64.9
PGSC0003DMG400002903 Solanum tuberosum HOM05D006185 ORTHO05D007572 1.3e-67 260.4 187 64.2
Prupe.7G195700 Prunus persica HOM05D006185 ORTHO05D007572 1.7e-67 260.0 184 64.1
QL11p001224 Quercus lobata HOM05D006185 ORTHO05D007572 1.7e-67 260.0 183 64.5
Rhsim05G0005100 Rhododendron simsii HOM05D006185 ORTHO05D007572 1.7e-67 260.0 189 64.6
Hund26074 Selenicereus undatus HOM05D006185 ORTHO05D007572 1.7e-67 260.0 186 62.4
Ah.09g229250 Amaranthus hybridus HOM05D006185 ORTHO05D007572 2.9e-67 259.2 188 61.7
Cfa002967 Carpinus fangiana HOM05D006185 ORTHO05D007572 6.4e-67 258.1 187 63.6
Haze_26036 Corylus avellana HOM05D006185 ORTHO05D007572 6.4e-67 258.1 188 63.3
vmacro17122 Vaccinium macrocarpon HOM05D006185 ORTHO05D007572 6.4e-67 258.1 188 62.8
CANSAT56G0026 Cannabis sativa HOM05D006185 ORTHO05D007572 8.4e-67 257.7 184 63.6
RcHm_v2.0_Chr2g0095441 Rosa chinensis HOM05D006185 ORTHO05D007572 1.9e-66 256.5 184 63.0
Duzib187G0940 Durio zibethinus HOM05D006185 ORTHO05D007572 2.4e-66 256.1 187 63.1
Psat7g057800 Pisum sativum HOM05D006185 ORTHO05D007572 2.4e-66 256.1 184 62.5
FAN26G0065 Fragaria x ananassa HOM05D006185 ORTHO05D007572 3.2e-66 255.8 184 62.5
FAN26G3397 Fragaria x ananassa HOM05D006185 ORTHO05D007572 3.2e-66 255.8 184 62.5
Thecc.09G074200 Theobroma cacao HOM05D006185 ORTHO05D007572 4.2e-66 255.4 187 63.6
TPR.G12562 Trifolium pratense HOM05D006185 ORTHO05D007572 4.2e-66 255.4 184 62.0
CANSAT56G1917 Cannabis sativa HOM05D006185 ORTHO05D007572 5.5e-66 255.0 185 63.8
Duzib150G0101 Durio zibethinus HOM05D006185 ORTHO05D007572 5.5e-66 255.0 187 62.0
CANSAT56G3530 Cannabis sativa HOM05D006185 ORTHO05D007572 7.1e-66 254.6 185 63.8
DCAR_010492 Daucus carota HOM05D006185 ORTHO05D007572 7.1e-66 254.6 182 65.4
FvH4_1g09020 Fragaria vesca HOM05D006185 ORTHO05D007572 2.1e-65 253.1 187 61.0
FAN19G1369 Fragaria x ananassa HOM05D006185 ORTHO05D007572 2.1e-65 253.1 187 61.0
Lj4g0025093 Lotus japonicus HOM05D006185 ORTHO05D007572 2.1e-65 253.1 185 62.2
Cpa.g.sc28.15 Carica papaya HOM05D006185 ORTHO05D007572 7.9e-65 251.1 188 61.2
Lalb_Chr07g0181271 Lupinus albus HOM05D006185 ORTHO05D007572 7.9e-65 251.1 185 63.2
MD02G1095400 Malus domestica HOM05D006185 ORTHO05D007572 7.9e-65 251.1 183 62.3
MELO3C015534.2 Cucumis melo HOM05D006185 ORTHO05D007572 1.0e-64 250.8 204 56.9
Ciclev10009607m.g Citrus clementina HOM05D006185 ORTHO05D007572 1.3e-64 250.4 184 63.0
Medtr4g125100 Medicago truncatula HOM05D006185 ORTHO05D007572 2.3e-64 249.6 185 60.5
Phvul.003G129600 Phaseolus vulgaris HOM05D006185 ORTHO05D007572 3.9e-64 248.8 186 59.7
AL1G31710 Arabidopsis lyrata HOM05D006185 ORTHO05D007572 5.1e-64 248.4 183 62.8
Aa31LG7G3870 Aethionema arabicum HOM05D006185 ORTHO05D007572 8.7e-64 247.7 182 62.6
Thhalv10008865m.g Eutrema salsugineum HOM05D006185 ORTHO05D007572 1.1e-63 247.3 183 62.3
FAN23G1580 Fragaria x ananassa HOM05D006185 ORTHO05D007572 1.9e-63 246.5 184 60.9
VMungo1215G2404 Vigna mungo HOM05D006185 ORTHO05D007572 4.3e-63 245.4 186 59.1
GSVIVG01015050001 Vitis vinifera HOM05D006185 ORTHO05D007572 1.3e-62 243.8 184 59.2
AT1G19130 Arabidopsis thaliana HOM05D006185 ORTHO05D007572 2.1e-62 243.0 187 60.4
Carub.0001s1876 Capsella rubella HOM05D006185 ORTHO05D007572 2.1e-62 243.0 183 60.7
TAR624G1115 Trochodendron aralioides HOM05D006185 ORTHO05D007572 3.7e-62 242.3 188 60.1
unitig_699.g19263 Utricularia gibba HOM05D000454 ORTHO05D007572 4.8e-62 241.9 181 59.7
BraA08t34935Z Brassica rapa HOM05D006185 ORTHO05D007572 6.2e-62 241.5 183 60.1
Actinidia30236 Actinidia chinensis HOM05D006185 ORTHO05D007572 8.1e-62 241.1 223 53.4
A08p30000 Brassica napus HOM05D006185 ORTHO05D007572 8.1e-62 241.1 183 60.1
THA.LOC104799837 Tarenaya hassleriana HOM05D006185 ORTHO05D007572 1.4e-61 240.4 182 59.9
BcaC07g38980 Brassica carinata HOM05D006185 ORTHO05D007572 2.4e-61 239.6 183 59.6
Hund26091 Selenicereus undatus HOM05D006185 ORTHO05D007572 4.0e-61 238.8 181 59.7
C08p19220 Brassica napus HOM05D006185 ORTHO05D007572 6.9e-61 238.0 183 59.0
BolC8t49541H Brassica oleracea HOM05D006185 ORTHO05D007572 6.9e-61 238.0 183 59.0
BcaB03g12935 Brassica carinata HOM05D006185 ORTHO05D007572 1.5e-60 236.9 184 59.8
Glyma.13G111600 Glycine max HOM05D006185 ORTHO05D007572 1.5e-60 236.9 190 55.3
Sc08g0009100 Simmondsia chinensis HOM05D006185 ORTHO05D007572 3.4e-60 235.7 187 56.7
AUR62028304 Chenopodium quinoa HOM05D006185 ORTHO05D007572 5.8e-60 235.0 188 56.4
Sabra06G0109300 Salix brachista HOM05D006185 ORTHO05D007572 7.6e-60 234.6 215 54.0
AUR62025298 Chenopodium quinoa HOM05D006185 ORTHO05D007572 1.7e-59 233.4 188 56.4
EL10Ac8g18996 Beta vulgaris HOM05D006185 ORTHO05D007572 6.5e-59 231.5 184 57.6
Eucgr.C00790 Eucalyptus grandis HOM05D006185 ORTHO05D007572 2.1e-57 226.5 190 57.4
Nn6g35681 Nelumbo nucifera HOM05D006185 ORTHO05D007572 6.0e-57 224.9 186 57.0
Nn5g27974 Nelumbo nucifera HOM05D006185 ORTHO05D007572 1.3e-56 223.8 186 55.9
Aqoxy7G04191 Aquilegia oxysepala HOM05D006185 ORTHO05D007572 6.7e-56 221.5 188 56.4
AUR62028278 Chenopodium quinoa HOM05D006185 ORTHO05D007572 2.5e-55 219.5 188 54.8
Lalb_Chr12g0200241 Lupinus albus HOM05D006185 ORTHO05D007572 3.3e-55 219.2 183 54.1
MBI13_g00698_MAGBIO Magnolia biondii HOM05D006185 ORTHO05D007572 4.3e-55 218.8 188 57.4
AUR62025276 Chenopodium quinoa HOM05D006185 ORTHO05D007572 7.4e-55 218.0 148 64.2
ATR0006G060 Amborella trichopoda HOM05D006185 ORTHO05D007572 2.1e-54 216.5 187 55.1
Os08g0455800 Oryza sativa ssp. japonica HOM05D006185 ORTHO05D007572 8.2e-54 214.5 188 52.7
Mapoly0007s0060 Marchantia polymorpha HOM05D006185 ORTHO05D007572 1.1e-53 214.2 179 56.4
Zm00001eb040490 Zea mays HOM05D006185 ORTHO05D007572 1.1e-53 214.2 188 53.2
SMO340G0144 Selaginella moellendorffii HOM05D006185 ORTHO05D007572 5.8e-52 208.4 183 52.5
Pp3c9_22400 Physcomitrium patens HOM05D006185 ORTHO05D007572 1.0e-51 207.6 187 52.9
Gohir.A06G078100 Gossypium hirsutum HOM05D006185 ORTHO05D007572 5.0e-51 205.3 187 54.5
arahy.Tifrunner.gnm1.ann1.Y0H2IU Arachis hypogaea HOM05D006185 ORTHO05D007572 6.5e-51 204.9 185 53.0
Os06g0198500 Oryza sativa ssp. japonica HOM05D006185 ORTHO05D007572 8.4e-51 204.5 189 51.3
HPP92_004362 Vanilla planifolia HOM05D006185 ORTHO05D007572 1.1e-50 204.1 173 56.1
arahy.Tifrunner.gnm1.ann1.85MSRM Arachis hypogaea HOM05D006185 ORTHO05D007572 1.4e-50 203.8 185 52.4
SEGI_13235 Sequoiadendron giganteum HOM05D006185 ORTHO05D007572 1.4e-50 203.8 190 51.6
Sed0027040 Sechium edule HOM05D006185 ORTHO05D007572 3.2e-50 202.6 147 60.5
MBI19_g05291_MAGBIO Magnolia biondii HOM05D006185 ORTHO05D007572 7.4e-47 191.4 179 54.2
Gohir.D06G077100 Gossypium hirsutum HOM05D006185 ORTHO05D007572 1.5e-44 183.7 134 61.9
MBI13_g47248_MAGBIO Magnolia biondii HOM05D006185 ORTHO05D007572 1.0e-43 181.0 188 50.0
MSTRG.26479 Avicennia marina HOM05D006185 ORTHO05D007572 9.7e-31 137.9 111 59.5
FAN28G1197 Fragaria x ananassa HOM05D006185 ORTHO05D007572 1.4e-29 134.0 82 69.5
CARHR019730 Cardamine hirsuta HOM05D006185 ORTHO05D007572 5.9e-28 128.6 79 70.9
Ah.14g084750 Amaranthus hybridus HOM05D006185 ORTHO05D007572 6.7e-24 115.2 109 49.5
MBI14_g46913_MAGBIO Magnolia biondii HOM05D006185 ORTHO05D007572 1.5e-23 114.0 101 54.5
Os06g0198600 Oryza sativa ssp. japonica HOM05D006185 ORTHO05D007572 2.7e-17 93.2 120 42.5
Eucgr.C00789 Eucalyptus grandis HOM05D006185 ORTHO05D007572 4.5e-12 75.9 86 43.0
BcaB02g10882 Brassica carinata HOM05D006185 ORTHO05D007572 1.2e-07 61.2 101 32.7


User provided reference genes

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