Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr06g0167311 Helianthus annuus HOM05D002285 ORTHO05D009255 1.5e-107 392.9 205 100.0
Lsat_1_v5_gn_5_187701 Lactuca sativa HOM05D002285 ORTHO05D009255 4.6e-64 248.4 196 67.3
ECA246G1023 Erigeron canadensis HOM05D002285 ORTHO05D009255 3.9e-63 245.4 305 51.1
Dinv28914 Davidia involucrata HOM05D002285 ORTHO05D009255 8.8e-39 164.5 278 39.2
CSS0042705 Camellia sinensis var. sinensis HOM05D002285 ORTHO05D009255 9.7e-38 161.0 319 38.9
TWI31G1223 Tripterygium wilfordii HOM05D002285 ORTHO05D009255 9.1e-36 154.5 319 36.4
Atru.chr6.1776 Acer truncatum HOM05D002285 ORTHO05D009255 4.5e-35 152.1 318 37.1
CiPaw.12G060200 Carya illinoinensis HOM05D002285 ORTHO05D009255 5.9e-35 151.8 281 38.1
Gohir.A03G002800 Gossypium hirsutum HOM05D002285 ORTHO05D009255 1.3e-34 150.6 310 36.5
Gohir.D03G169500 Gossypium hirsutum HOM05D002285 ORTHO05D009255 3.8e-34 149.1 305 36.4
DCAR_024978 Daucus carota HOM05D002285 ORTHO05D009255 6.5e-34 148.3 217 46.5
Gorai.003G179800 Gossypium raimondii HOM05D002285 ORTHO05D009255 4.2e-33 145.6 310 36.1
PGR042G0121 Punica granatum HOM05D002285 ORTHO05D009255 7.2e-33 144.8 318 34.0
Duzib068G0948 Durio zibethinus HOM05D002285 ORTHO05D009255 1.6e-32 143.7 325 33.5
Cpa.g.sc516.1 Carica papaya HOM05D002285 ORTHO05D009255 3.6e-32 142.5 320 35.3
Cc08_g01890 Coffea canephora HOM05D002285 ORTHO05D009255 3.6e-32 142.5 321 35.5
Manes.15G172700 Manihot esculenta HOM05D002285 ORTHO05D009255 3.6e-32 142.5 318 35.5
Dinv25183 Davidia involucrata HOM05D002285 ORTHO05D009255 4.0e-31 139.0 199 44.2
Potri.001G147000 Populus trichocarpa HOM05D002285 ORTHO05D009255 8.8e-31 137.9 318 34.6
Duzib205G1165 Durio zibethinus HOM05D002285 ORTHO05D009255 1.5e-30 137.1 208 42.8
Glyma.05G189200 Glycine max HOM05D002285 ORTHO05D009255 4.4e-30 135.6 303 33.3
Lalb_Chr07g0184551 Lupinus albus HOM05D002285 ORTHO05D009255 4.4e-30 135.6 310 32.6
Ciclev10032127m.g Citrus clementina HOM05D002285 ORTHO05D009255 1.3e-29 134.0 330 34.5
RcHm_v2.0_Chr7g0208261 Rosa chinensis HOM05D002285 ORTHO05D009255 2.2e-29 133.3 317 33.8
Phvul.002G269900 Phaseolus vulgaris HOM05D002285 ORTHO05D009255 2.8e-29 132.9 305 33.1
FvH4_5g21140 Fragaria vesca HOM05D002285 ORTHO05D009255 4.8e-29 132.1 312 32.7
FAN18G1893 Fragaria x ananassa HOM05D002285 ORTHO05D009255 4.8e-29 132.1 312 32.7
COL.COLO4_17111 Corchorus olitorius HOM05D002285 ORTHO05D009255 6.3e-29 131.7 334 32.6
FAN08G0952 Fragaria x ananassa HOM05D002285 ORTHO05D009255 6.3e-29 131.7 207 41.5
QL12p007193 Quercus lobata HOM05D002285 ORTHO05D009255 1.8e-28 130.2 329 32.5
FAN13G2873 Fragaria x ananassa HOM05D002285 ORTHO05D009255 2.4e-28 129.8 207 41.1
Sed0018690 Sechium edule HOM05D002285 ORTHO05D009255 2.4e-28 129.8 305 33.4
Nitab4.5_0006693g0010 Nicotiana tabacum HOM05D002285 ORTHO05D009255 4.1e-28 129.0 322 33.2
Thecc.03G234200 Theobroma cacao HOM05D002285 ORTHO05D009255 7.0e-28 128.3 330 31.2
VMungo0251G1000 Vigna mungo HOM05D002285 ORTHO05D009255 7.0e-28 128.3 192 44.8
THA.LOC104806190 Tarenaya hassleriana HOM05D002285 ORTHO05D009255 2.7e-27 126.3 315 31.7
MSTRG.2508 Avicennia marina HOM05D002285 ORTHO05D009255 4.5e-27 125.6 330 30.6
Cfa014517 Carpinus fangiana HOM05D002285 ORTHO05D009255 5.9e-27 125.2 330 30.9
MELO3C003372.2 Cucumis melo HOM05D002285 ORTHO05D009255 1.0e-26 124.4 309 31.1
CsaV3_3G049540 Cucumis sativus L. HOM05D002285 ORTHO05D009255 1.3e-26 124.0 309 30.7
SGA_v2.0_scaffold90G27898 Striga asiatica HOM05D002285 ORTHO05D009255 1.7e-26 123.6 249 38.2
Nitab4.5_0002055g0110 Nicotiana tabacum HOM05D002285 ORTHO05D009255 2.2e-26 123.2 321 32.4
Psat7g048120 Pisum sativum HOM05D002285 ORTHO05D009255 2.9e-26 122.9 309 30.1
Solyc08g077290.1 Solanum lycopersicum HOM05D002285 ORTHO05D009255 3.8e-26 122.5 319 32.0
Hund11271 Selenicereus undatus HOM05D002285 ORTHO05D009255 5.0e-26 122.1 323 33.4
BcaC06g31551 Brassica carinata HOM05D002285 ORTHO05D009255 6.5e-26 121.7 304 32.2
TAR375G0607 Trochodendron aralioides HOM05D002285 ORTHO05D009255 2.5e-25 119.8 199 43.7
MD06G1040800 Malus domestica HOM05D002285 ORTHO05D009255 4.2e-25 119.0 321 32.4
Prupe.5G047100 Prunus persica HOM05D002285 ORTHO05D009255 5.5e-25 118.6 327 31.8
TPR.G37318 Trifolium pratense HOM05D002285 ORTHO05D009255 5.5e-25 118.6 334 28.4
Peaxi162Scf00084g00092 Petunia axillaris HOM05D002285 ORTHO05D009255 1.6e-24 117.1 318 32.4
Ah.12g053690 Amaranthus hybridus HOM05D002285 ORTHO05D009255 2.7e-24 116.3 334 31.1
PGSC0003DMG400024213 Solanum tuberosum HOM05D002285 ORTHO05D009255 3.6e-24 115.9 317 30.6
PSO782G1486 Papaver somniferum HOM05D002285 ORTHO05D009255 1.4e-23 114.0 187 40.6
Ca_17655_v3 Cicer arietinum L. HOM05D002285 ORTHO05D009255 1.8e-23 113.6 199 37.2
MD16G1268900 Malus domestica HOM05D002285 ORTHO05D009255 1.8e-23 113.6 319 32.3
Lj4g0007705 Lotus japonicus HOM05D002285 ORTHO05D009255 2.3e-23 113.2 298 30.9
MBI04_g31973_MAGBIO Magnolia biondii HOM05D002285 ORTHO05D009255 4.0e-23 112.5 215 36.7
Oeu028031.1 Olea europaea HOM05D002285 ORTHO05D009255 4.0e-23 112.5 321 31.8
Sopen08g025870 Solanum pennellii HOM05D002285 ORTHO05D009255 4.0e-23 112.5 317 30.0
Aqoxy3G02523 Aquilegia oxysepala HOM05D002285 ORTHO05D009255 5.2e-23 112.1 322 29.2
Medtr8g093080 Medicago truncatula HOM05D002285 ORTHO05D009255 1.5e-22 110.5 309 30.4
EL10As14g24089 Beta vulgaris HOM05D002285 ORTHO05D009255 5.7e-22 108.6 332 31.3
PSO063G2459 Papaver somniferum HOM05D002285 ORTHO05D009255 5.7e-22 108.6 190 39.5
PSO478G0928 Papaver somniferum HOM05D002285 ORTHO05D009255 5.7e-22 108.6 190 39.5
BraA06t27534Z Brassica rapa HOM05D002285 ORTHO05D009255 7.5e-22 108.2 305 31.1
unitig_32.g11505 Utricularia gibba HOM05D002285 ORTHO05D009255 2.8e-21 106.3 200 39.0
Eucgr.E00315 Eucalyptus grandis HOM05D002285 ORTHO05D009255 8.3e-21 104.8 326 28.8
A06p46600 Brassica napus HOM05D002285 ORTHO05D009255 1.4e-20 104.0 302 30.5
ATR0706G254 Amborella trichopoda HOM05D002285 ORTHO05D009255 1.3e-18 97.4 303 27.4
BcaC06g34433 Brassica carinata HOM05D002285 ORTHO05D009255 1.3e-18 97.4 301 29.9
C07p28510 Brassica napus HOM05D002285 ORTHO05D009255 1.3e-18 97.4 301 29.9
BolC7t43391H Brassica oleracea HOM05D002285 ORTHO05D009255 1.3e-18 97.4 301 29.9
Sc07g0008790 Simmondsia chinensis HOM05D002285 ORTHO05D009255 1.7e-18 97.1 357 28.3
CAN.G1445.16 Capsicum annuum HOM05D002285 ORTHO05D009255 2.3e-18 96.7 330 29.7
Migut.A01004 Erythranthe guttata HOM05D002285 ORTHO05D009255 1.1e-17 94.4 319 30.1
Rhsim01G0229700 Rhododendron simsii HOM05D002285 ORTHO05D009255 2.5e-17 93.2 271 33.2
CARHR176650 Cardamine hirsuta HOM05D002285 ORTHO05D009255 3.2e-17 92.8 308 28.9
CDE06G0617 Ceratophyllum demersum HOM05D002285 ORTHO05D009255 5.5e-17 92.0 288 29.9
Carub.0008s0269 Capsella rubella HOM05D002285 ORTHO05D009255 1.2e-16 90.9 307 29.3
Sp2g10370 Schrenkiella parvula HOM05D002285 ORTHO05D009255 1.2e-16 90.9 315 29.5
AT5G45420 Arabidopsis thaliana HOM05D002285 ORTHO05D009255 1.6e-16 90.5 198 36.9
Aa31LG9G7580 Aethionema arabicum HOM05D002285 ORTHO05D009255 1.8e-15 87.0 318 27.7
AUR62018777 Chenopodium quinoa HOM05D002285 ORTHO05D009255 2.6e-14 83.2 252 30.6
SHI10334 Sapria himalayana HOM05D002285 ORTHO05D009255 3.7e-13 79.3 124 40.3
Sed0003788 Sechium edule HOM05D002285 ORTHO05D009255 1.1e-12 77.8 149 40.3
Pp3c24_8050 Physcomitrium patens HOM05D002285 ORTHO05D009255 5.4e-12 75.5 204 31.4
HPP92_025456 Vanilla planifolia HOM05D002285 ORTHO05D009255 5.4e-12 75.5 320 27.8
SEGI_19264 Sequoiadendron giganteum HOM05D002285 ORTHO05D009255 8.6e-10 68.2 328 25.0
Os08g0159000 Oryza sativa ssp. japonica HOM05D002285 ORTHO05D009255 7.3e-09 65.1 256 25.0
C02p46230 Brassica napus HOM05D002285 ORTHO05D009255 1.6e-08 63.9 101 41.6
Zm00001eb415690 Zea mays HOM05D002285 ORTHO05D009255 6.1e-08 62.0 283 24.4
GSVIVG01013228001 Vitis vinifera HOM05D000893 ORTHO05D009255 1.0e-07 61.2 62 56.5
Rhsim07G0122300 Rhododendron simsii HOM05D002285 ORTHO05D009255 2.3e-07 60.1 102 46.1
AUR62007223 Chenopodium quinoa HOM05D002285 ORTHO05D009255 4.0e-07 59.3 91 42.9
GSVIVG01011241001 Vitis vinifera HOM05D002285 ORTHO05D009255 6.8e-07 58.5 89 43.8
AagrBONN_evm.TU.Sc2ySwM_228.1252 Anthoceros agrestis HOM05D002285 ORTHO05D009255 2.0e-06 57.0 202 30.2
Mapoly0042s0072 Marchantia polymorpha HOM05D002285 ORTHO05D009255 4.4e-06 55.8 210 28.6
SMO118G0142 Selaginella moellendorffii HOM05D002285 ORTHO05D009255 5.7e-06 55.5 198 30.8
BcaC03g16748 Brassica carinata HOM05D002285 ORTHO05D009255 9.8e-06 54.7 91 40.7
BolC2t10678H Brassica oleracea HOM05D002285 ORTHO05D009255 9.8e-06 54.7 91 40.7


User provided reference genes

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