Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr05g0154211 Helianthus annuus HOM05D000882 ORTHO05D006555 1.6e-126 456.4 293 100.0
HanXRQChr17g0540461 Helianthus annuus HOM05D000882 ORTHO05D006555 7.3e-47 191.8 191 86.4
Lsat_1_v5_gn_3_32040 Lactuca sativa HOM05D000882 ORTHO05D006555 1.3e-30 137.9 196 44.4
HanXRQChr11g0330821 Helianthus annuus HOM05D000882 ORTHO05D006555 6.9e-29 132.1 91 70.3
HanXRQChr06g0175061 Helianthus annuus HOM05D000882 ORTHO05D006555 9.0e-29 131.7 91 70.3
HanXRQChr01g0013821 Helianthus annuus HOM05D001166 ORTHO05D000992 2.5e-26 123.6 81 79.0
Actinidia34003 Actinidia chinensis HOM05D000882 ORTHO05D006555 2.3e-16 90.5 97 56.7
CSS0000697 Camellia sinensis var. sinensis HOM05D000882 ORTHO05D006555 2.3e-16 90.5 86 59.3
ECA246G3785 Erigeron canadensis HOM05D000882 ORTHO05D006555 1.1e-15 88.2 43 90.7
Dinv18817 Davidia involucrata HOM05D000882 ORTHO05D006555 2.2e-14 84.0 86 58.1
DCAR_024627 Daucus carota HOM05D000882 ORTHO05D006555 1.1e-13 81.6 102 50.0
Gohir.A04G101000 Gossypium hirsutum HOM05D000882 ORTHO05D006555 1.8e-13 80.9 91 53.8
Gohir.D04G140200 Gossypium hirsutum HOM05D000882 ORTHO05D006555 1.8e-13 80.9 91 53.8
Gorai.012G125200 Gossypium raimondii HOM05D000882 ORTHO05D006555 1.8e-13 80.9 91 53.8
COL.COLO4_05290 Corchorus olitorius HOM05D000882 ORTHO05D006555 2.4e-13 80.5 85 54.1
QL03p049824 Quercus lobata HOM05D000882 ORTHO05D006555 4.1e-13 79.7 84 57.1
Haze_12484 Corylus avellana HOM05D000882 ORTHO05D006555 5.3e-13 79.3 97 49.5
Duzib052G0681 Durio zibethinus HOM05D000882 ORTHO05D006555 5.3e-13 79.3 85 52.9
vmacro16077 Vaccinium macrocarpon HOM05D000882 ORTHO05D006555 5.3e-13 79.3 86 53.5
Duzib132G0070 Durio zibethinus HOM05D000882 ORTHO05D006555 6.9e-13 79.0 85 54.1
Thecc.02G195000 Theobroma cacao HOM05D000882 ORTHO05D006555 9.1e-13 78.6 85 54.1
Sabra01G0045500 Salix brachista HOM05D000882 ORTHO05D006555 1.2e-12 78.2 84 57.1
Cc11_g15170 Coffea canephora HOM05D000882 ORTHO05D006555 1.5e-12 77.8 89 55.1
ClCG06G001780 Citrullus lanatus HOM05D000882 ORTHO05D006555 2.0e-12 77.4 84 53.6
Rhsim12G0098400 Rhododendron simsii HOM05D000882 ORTHO05D006555 2.0e-12 77.4 86 54.7
CsaV3_6G007820 Cucumis sativus L. HOM05D000882 ORTHO05D006555 3.4e-12 76.6 95 48.4
Manes.09G186500 Manihot esculenta HOM05D000882 ORTHO05D006555 5.9e-12 75.9 84 51.2
Cpa.g.sc2017.1 Carica papaya HOM05D000882 ORTHO05D006555 7.7e-12 75.5 88 54.5
Sabra03G0119500 Salix brachista HOM05D000882 ORTHO05D006555 7.7e-12 75.5 84 51.2
Potri.001G065600 Populus trichocarpa HOM05D000882 ORTHO05D006555 1.0e-11 75.1 84 53.6
CAN.G4.9 Capsicum annuum HOM05D000882 ORTHO05D006555 1.3e-11 74.7 91 49.5
Cfa009433 Carpinus fangiana HOM05D000882 ORTHO05D006555 1.7e-11 74.3 95 51.6
PGR119G1660 Punica granatum HOM05D000882 ORTHO05D006555 1.7e-11 74.3 84 53.6
PGSC0003DMG400020522 Solanum tuberosum HOM05D000882 ORTHO05D006555 2.2e-11 73.9 89 50.6
MELO3C022351.2 Cucumis melo HOM05D000882 ORTHO05D006555 3.8e-11 73.2 95 48.4
Eucgr.G01961 Eucalyptus grandis HOM05D000882 ORTHO05D006555 3.8e-11 73.2 85 50.6
CiPaw.06G108300 Carya illinoinensis HOM05D000882 ORTHO05D006555 5.0e-11 72.8 84 52.4
ECA248G1315 Erigeron canadensis HOM05D001166 ORTHO05D000992 5.0e-11 72.8 66 65.2
Glyma.18G282300 Glycine max HOM05D000882 ORTHO05D006555 1.1e-10 71.6 85 55.3
GSVIVG01004933001 Vitis vinifera HOM05D000882 ORTHO05D006555 1.1e-10 71.6 84 50.0
Glyma.08G257900 Glycine max HOM05D000882 ORTHO05D006555 1.4e-10 71.2 85 55.3
Nitab4.5_0000011g0370 Nicotiana tabacum HOM05D000882 ORTHO05D006555 1.4e-10 71.2 93 48.4
Ciclev10030535m.g Citrus clementina HOM05D000882 ORTHO05D006555 2.5e-10 70.5 89 52.8
Migut.E00001 Erythranthe guttata HOM05D000882 ORTHO05D006555 2.5e-10 70.5 133 39.8
Sopen12g013920 Solanum pennellii HOM05D000882 ORTHO05D006555 2.5e-10 70.5 92 46.7
Ca_07088_v3 Cicer arietinum L. HOM05D000882 ORTHO05D006555 3.2e-10 70.1 86 52.3
Potri.003G164300 Populus trichocarpa HOM05D000882 ORTHO05D006555 4.2e-10 69.7 86 48.8
Lalb_Chr04g0258091 Lupinus albus HOM05D000882 ORTHO05D006555 5.5e-10 69.3 93 48.4
Psat3g189520 Pisum sativum HOM05D000882 ORTHO05D006555 1.2e-09 68.2 103 46.6
Lj1A106T20 Lonicera japonica HOM05D001166 ORTHO05D000992 1.6e-09 67.8 66 60.6
Prupe.1G217600 Prunus persica HOM05D000882 ORTHO05D006555 2.1e-09 67.4 102 45.1
ECA247G1442 Erigeron canadensis HOM05D001091 ORTHO05D001020 2.7e-09 67.0 66 57.6
Lalb_Chr04g0258101 Lupinus albus HOM05D000882 ORTHO05D006555 2.7e-09 67.0 85 48.2
Nitab4.5_0001510g0050 Nicotiana tabacum HOM05D000882 ORTHO05D006555 2.7e-09 67.0 94 44.7
TAR371G0751 Trochodendron aralioides HOM05D000882 ORTHO05D006555 2.7e-09 67.0 86 50.0
VMungo1383G3079 Vigna mungo HOM05D000882 ORTHO05D006555 2.7e-09 67.0 85 50.6
Oeu019433.1 Olea europaea HOM05D000882 ORTHO05D006555 3.6e-09 66.6 125 38.4
Phvul.008G019000 Phaseolus vulgaris HOM05D000882 ORTHO05D006555 3.6e-09 66.6 85 49.4
THA.LOC104812602 Tarenaya hassleriana HOM05D000882 ORTHO05D006555 3.6e-09 66.6 100 48.0
TPR.G2920 Trifolium pratense HOM05D000882 ORTHO05D006555 3.6e-09 66.6 102 48.0
CiPaw.05G103000 Carya illinoinensis HOM05D000882 ORTHO05D006555 4.7e-09 66.2 84 48.8
Lsat_1_v5_gn_9_15841 Lactuca sativa HOM05D001166 ORTHO05D000992 4.7e-09 66.2 60 60.0
Medtr7g021190 Medicago truncatula HOM05D000882 ORTHO05D006555 4.7e-09 66.2 97 46.4
CSS0014252 Camellia sinensis var. sinensis HOM05D001166 ORTHO05D000992 6.1e-09 65.9 59 61.0
HanXRQChr08g0231271 Helianthus annuus HOM05D001166 ORTHO05D000992 6.1e-09 65.9 59 61.0
TAR629G2844 Trochodendron aralioides HOM05D000882 ORTHO05D006555 6.1e-09 65.9 86 48.8
DCAR_018603 Daucus carota HOM05D001166 ORTHO05D000992 7.9e-09 65.5 65 60.0
HanXRQChr09g0270561 Helianthus annuus HOM05D001166 ORTHO05D000992 7.9e-09 65.5 64 56.2
TWI75G1568 Tripterygium wilfordii HOM05D000882 ORTHO05D006555 7.9e-09 65.5 85 49.4
Actinidia23133 Actinidia chinensis HOM05D001166 ORTHO05D000992 1.0e-08 65.1 83 44.6
Peaxi162Scf00023g00925 Petunia axillaris HOM05D000882 ORTHO05D006555 1.0e-08 65.1 99 43.4
MD13G1129000 Malus domestica HOM05D000882 ORTHO05D006555 1.4e-08 64.7 96 44.8
DCAR_012711 Daucus carota HOM05D001091 ORTHO05D001020 1.8e-08 64.3 59 61.0
MSTRG.13303 Avicennia marina HOM05D000882 ORTHO05D006555 3.9e-08 63.2 111 42.3
vmacro14673 Vaccinium macrocarpon HOM05D001166 ORTHO05D000992 3.9e-08 63.2 58 60.3
Cc01_g15780 Coffea canephora HOM05D001166 ORTHO05D000992 5.1e-08 62.8 58 58.6
Dinv07641 Davidia involucrata HOM05D001166 ORTHO05D000992 5.1e-08 62.8 57 61.4
RcHm_v2.0_Chr4g0429121 Rosa chinensis HOM05D000882 ORTHO05D006555 5.1e-08 62.8 85 49.4
Actinidia23811 Actinidia chinensis HOM05D001166 ORTHO05D000992 6.7e-08 62.4 59 57.6
THA.LOC104820684 Tarenaya hassleriana HOM05D000882 ORTHO05D006555 6.7e-08 62.4 100 45.0
CANSAT01G2636 Cannabis sativa HOM05D000882 ORTHO05D006555 8.8e-08 62.0 97 47.4
Nitab4.5_0001015g0040 Nicotiana tabacum HOM05D001166 ORTHO05D000992 1.5e-07 61.2 59 54.2
Actinidia11653 Actinidia chinensis HOM05D001166 ORTHO05D000992 2.0e-07 60.8 59 55.9
Sed0022347 Sechium edule HOM05D000882 ORTHO05D006555 2.0e-07 60.8 84 51.2
Solyc09g020000.3 Solanum lycopersicum HOM05D001166 ORTHO05D000992 2.6e-07 60.5 56 58.9
Sopen09g012830 Solanum pennellii HOM05D001166 ORTHO05D000992 2.6e-07 60.5 56 58.9
Actinidia34521 Actinidia chinensis HOM05D001166 ORTHO05D000992 3.3e-07 60.1 59 57.6
Aqoxy3G01872 Aquilegia oxysepala HOM05D000882 ORTHO05D006555 3.3e-07 60.1 96 45.8
CSS0018593 Camellia sinensis var. sinensis HOM05D001166 ORTHO05D000992 3.3e-07 60.1 59 57.6
Lsat_1_v5_gn_5_175620 Lactuca sativa HOM05D001166 ORTHO05D000992 3.3e-07 60.1 62 56.5
Nitab4.5_0001348g0190 Nicotiana tabacum HOM05D001166 ORTHO05D000992 3.3e-07 60.1 56 57.1
Nitab4.5_0004982g0050 Nicotiana tabacum HOM05D001166 ORTHO05D000992 3.3e-07 60.1 56 57.1
Nitab4.5_0007648g0010 Nicotiana tabacum HOM05D001166 ORTHO05D000992 3.3e-07 60.1 59 54.2
TWI36G0606 Tripterygium wilfordii HOM05D000882 ORTHO05D006555 4.4e-07 59.7 85 49.4
Dinv28778 Davidia involucrata HOM05D001166 ORTHO05D000992 5.7e-07 59.3 57 57.9
Rhsim13G0055700 Rhododendron simsii HOM05D001166 ORTHO05D000992 5.7e-07 59.3 66 53.0
CAN.G253.2 Capsicum annuum HOM05D001166 ORTHO05D000992 7.4e-07 58.9 56 57.1
Lj2A1109G68 Lonicera japonica HOM05D001166 ORTHO05D000992 7.4e-07 58.9 60 55.0
Rhsim01G0246500 Rhododendron simsii HOM05D001166 ORTHO05D000992 7.4e-07 58.9 59 55.9
Thhalv10016157m.g Eutrema salsugineum HOM05D000882 ORTHO05D006555 1.3e-06 58.2 105 41.0
HanXRQChr11g0347341 Helianthus annuus HOM05D001166 ORTHO05D000992 1.3e-06 58.2 54 57.4
vmacro02846 Vaccinium macrocarpon HOM05D001166 ORTHO05D000992 1.7e-06 57.8 66 53.0
C04p15540 Brassica napus HOM05D000882 ORTHO05D006555 2.2e-06 57.4 55 60.0
BolC4t23125H Brassica oleracea HOM05D000882 ORTHO05D006555 2.2e-06 57.4 55 60.0
SGA_v2.0_scaffold85G26587 Striga asiatica HOM05D000882 ORTHO05D006555 2.2e-06 57.4 123 35.8
Oeu064701.1 Olea europaea HOM05D001166 ORTHO05D000992 2.8e-06 57.0 57 56.1
Peaxi162Scf00390g00017 Petunia axillaris HOM05D001166 ORTHO05D000992 3.7e-06 56.6 56 53.6
Peaxi162Scf00390g00025 Petunia axillaris HOM05D001166 ORTHO05D000992 3.7e-06 56.6 56 53.6
MSTRG.12734 Avicennia marina HOM05D001166 ORTHO05D000992 6.3e-06 55.8 57 52.6


User provided reference genes

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