Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr05g0151451 Helianthus annuus HOM05D008280 ORTHO05D010492 5.2e-53 210.7 100 100.0
CAN.G1126.5 Capsicum annuum HOM05D008280 ORTHO05D010492 4.1e-42 174.5 96 88.5
CAN.G1159.15 Capsicum annuum HOM05D008280 ORTHO05D010492 4.1e-42 174.5 96 88.5
CAN.G266.10 Capsicum annuum HOM05D008280 ORTHO05D010492 4.1e-42 174.5 96 88.5
HanXRQMTg0579251 Helianthus annuus HOM05D008280 ORTHO05D010492 4.1e-42 174.5 96 88.5
Solyc00g020040.1 Solanum lycopersicum HOM05D008280 ORTHO05D010492 4.1e-42 174.5 96 88.5
Lj2P1227T101 Lonicera japonica HOM05D008280 ORTHO05D010492 2.7e-41 171.8 96 87.5
Nn1g10160 Nelumbo nucifera HOM05D008280 ORTHO05D010492 2.7e-41 171.8 99 84.8
Nn7g37645 Nelumbo nucifera HOM05D008280 ORTHO05D010492 2.7e-41 171.8 101 83.2
Lsat_1_v5_gn_7_99841 Lactuca sativa HOM05D008280 ORTHO05D010492 7.8e-41 170.2 96 86.5
DCAR_032445 Daucus carota HOM05D008280 ORTHO05D010492 1.7e-40 169.1 96 86.5
Sed0015016 Sechium edule HOM05D008280 ORTHO05D010492 3.9e-40 167.9 96 85.4
Sed0028122 Sechium edule HOM05D008280 ORTHO05D010492 3.9e-40 167.9 96 85.4
SalBow1G8376 Salvia bowleyana HOM05D008280 ORTHO05D010492 5.1e-40 167.5 96 85.4
ATMG00110 Arabidopsis thaliana HOM05D008280 ORTHO05D010492 8.6e-40 166.8 96 85.4
BNapus_Darmor_BZH_scaffold_234p00070 Brassica napus HOM05D008280 ORTHO05D010492 8.6e-40 166.8 96 85.4
BolSC28t60354H Brassica oleracea HOM05D008280 ORTHO05D010492 8.6e-40 166.8 96 85.4
BraSC159t45719Z Brassica rapa HOM05D008280 ORTHO05D010492 8.6e-40 166.8 96 85.4
BraSC77t46666Z Brassica rapa HOM05D008280 ORTHO05D010492 8.6e-40 166.8 96 85.4
CARHR282640 Cardamine hirsuta HOM05D008280 ORTHO05D010492 8.6e-40 166.8 96 85.4
Eucgr.E02151 Eucalyptus grandis HOM05D008280 ORTHO05D010492 8.6e-40 166.8 99 84.8
Sp3g25740 Schrenkiella parvula HOM05D008280 ORTHO05D010492 8.6e-40 166.8 96 85.4
arahy.Tifrunner.gnm1.ann1.U3KMBF Arachis hypogaea HOM05D008280 ORTHO05D010492 3.3e-39 164.9 96 84.4
BraSC48t46257Z Brassica rapa HOM05D008280 ORTHO05D010492 3.3e-39 164.9 95 85.3
RcHm_v2.0_MTg0498291 Rosa chinensis HOM05D008280 ORTHO05D010492 9.5e-39 163.3 96 84.4
Medtr0141s0020 Medicago truncatula HOM05D008280 ORTHO05D010492 1.6e-38 162.5 96 83.3
TPR.G21718 Trifolium pratense HOM05D008280 ORTHO05D010492 1.6e-38 162.5 96 83.3
CANSAT16G0019 Cannabis sativa HOM05D008280 ORTHO05D010492 2.1e-38 162.2 96 84.4
CAN.G72.16 Capsicum annuum HOM05D008280 ORTHO05D010492 2.8e-38 161.8 96 83.3
Lalb_Chr00c29g0408141 Lupinus albus HOM05D008280 ORTHO05D010492 2.8e-38 161.8 96 82.3
Nitab4.5_0009703g0040 Nicotiana tabacum HOM05D008280 ORTHO05D010492 8.1e-38 160.2 96 83.3
Lj5g0023723 Lotus japonicus HOM05D008280 ORTHO05D010492 5.2e-37 157.5 96 82.3
LjContig00315g0024501 Lotus japonicus HOM05D008280 ORTHO05D010492 5.2e-37 157.5 96 82.3
Potri.007G061721 Populus trichocarpa HOM05D008280 ORTHO05D010492 2.2e-35 152.1 96 82.3
Nitab4.5_0004471g0100 Nicotiana tabacum HOM05D008280 ORTHO05D010492 7.8e-33 143.7 96 78.1
Nitab4.5_0001796g0300 Nicotiana tabacum HOM05D008280 ORTHO05D010492 1.3e-32 142.9 83 85.5
SHI07395 Sapria himalayana HOM05D008280 ORTHO05D010492 2.5e-31 138.7 96 72.9
arahy.Tifrunner.gnm1.ann1.9X0QWA Arachis hypogaea HOM05D008280 ORTHO05D010492 2.8e-30 135.2 83 81.9
arahy.Tifrunner.gnm1.ann1.TAQ3SD Arachis hypogaea HOM05D008280 ORTHO05D010492 1.4e-29 132.9 83 80.7
MBI05_g23314_MAGBIO Magnolia biondii HOM05D008280 ORTHO05D010492 4.0e-29 131.3 89 76.4
MBI09_g03548_MAGBIO Magnolia biondii HOM05D008280 ORTHO05D010492 1.7e-27 125.9 83 78.3
CAN.G362.37 Capsicum annuum HOM05D008280 ORTHO05D010492 1.1e-26 123.2 96 70.8
TAR371G0473 Trochodendron aralioides HOM05D008280 ORTHO05D010492 7.8e-25 117.1 80 77.5
Solyc11g028160.1 Solanum lycopersicum HOM05D008280 ORTHO05D010492 7.3e-23 110.5 71 80.3
Medtr0094s0120 Medicago truncatula HOM05D008280 ORTHO05D010492 2.8e-22 108.6 72 76.4
CAN.G21.55 Capsicum annuum HOM05D008280 ORTHO05D010492 3.2e-10 68.6 37 86.5
Solyc12g035890.3 Solanum lycopersicum HOM05D000964 ORTHO05D004047 4.3e-07 58.2 44 61.4


User provided reference genes

Program Settings