Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr05g0149371 Helianthus annuus HOM05D006616 ORTHO05D008435 2.7e-297 1024.6 546 100.0
ECA246G4188 Erigeron canadensis HOM05D006616 ORTHO05D008435 9.7e-210 733.8 554 76.7
Lsat_1_v5_gn_6_110180 Lactuca sativa HOM05D006616 ORTHO05D008435 8.8e-171 604.4 564 67.0
Dinv27270 Davidia involucrata HOM05D006616 ORTHO05D008435 8.9e-139 498.0 706 49.3
Hma1.2p1_2178F.1_g316210 Hydrangea macrophylla HOM05D006616 ORTHO05D008435 2.2e-137 493.4 459 65.1
Rhsim11G0071400 Rhododendron simsii HOM05D006616 ORTHO05D008435 1.1e-133 481.1 647 50.5
Actinidia03423 Actinidia chinensis HOM05D006616 ORTHO05D008435 4.3e-133 479.2 674 48.8
GSVIVG01025818001 Vitis vinifera HOM05D006616 ORTHO05D008435 3.4e-130 469.5 470 61.1
TAR622G0026 Trochodendron aralioides HOM05D006616 ORTHO05D008435 3.0e-126 456.4 458 60.5
Cc10_g12770 Coffea canephora HOM05D006616 ORTHO05D008435 2.8e-124 449.9 464 60.3
Atru.chr1.1509 Acer truncatum HOM05D006616 ORTHO05D008435 4.0e-123 446.0 458 59.6
SGA_v2.0_scaffold25G11136 Striga asiatica HOM05D006616 ORTHO05D008435 9.9e-122 441.4 496 56.9
CSS0040058 Camellia sinensis var. sinensis HOM05D006616 ORTHO05D008435 1.3e-121 441.0 555 53.3
MSTRG.24176 Avicennia marina HOM05D006616 ORTHO05D008435 1.7e-121 440.7 572 53.3
CSS0027023 Camellia sinensis var. sinensis HOM05D006616 ORTHO05D008435 1.7e-121 440.7 480 57.7
Lj5g0015037 Lotus japonicus HOM05D006616 ORTHO05D008435 2.2e-121 440.3 571 54.3
PGR042G1816 Punica granatum HOM05D006616 ORTHO05D008435 6.4e-121 438.7 554 52.7
Ca_02795_v3 Cicer arietinum L. HOM05D006616 ORTHO05D008435 1.9e-120 437.2 509 56.0
TWI74G0800 Tripterygium wilfordii HOM05D006616 ORTHO05D008435 1.9e-120 437.2 461 59.2
Manes.09G002500 Manihot esculenta HOM05D006616 ORTHO05D008435 3.2e-120 436.4 457 60.8
RcHm_v2.0_Chr3g0494671 Rosa chinensis HOM05D006616 ORTHO05D008435 3.2e-120 436.4 460 59.1
Eucgr.A02183 Eucalyptus grandis HOM05D006616 ORTHO05D008435 7.1e-120 435.3 456 59.6
CANSAT78G0100 Cannabis sativa HOM05D006616 ORTHO05D008435 2.7e-119 433.3 532 54.5
Prupe.7G020500 Prunus persica HOM05D006616 ORTHO05D008435 2.7e-119 433.3 589 51.4
Potri.006G032200 Populus trichocarpa HOM05D006616 ORTHO05D008435 1.0e-118 431.4 470 57.9
Migut.N03264 Erythranthe guttata HOM05D006616 ORTHO05D008435 1.3e-118 431.0 579 54.4
MBI16_g32949_MAGBIO Magnolia biondii HOM05D006616 ORTHO05D008435 3.3e-117 426.4 459 58.0
VMungo0720G0485 Vigna mungo HOM05D006616 ORTHO05D008435 5.6e-117 425.6 561 52.9
Phvul.007G243700 Phaseolus vulgaris HOM05D006616 ORTHO05D008435 7.4e-117 425.2 558 51.8
SalBow2G2978 Salvia bowleyana HOM05D006616 ORTHO05D008435 7.4e-117 425.2 574 47.2
Lj7A350T24 Lonicera japonica HOM05D006616 ORTHO05D008435 9.6e-117 424.9 755 40.7
Nn3g18184 Nelumbo nucifera HOM05D006616 ORTHO05D008435 9.6e-117 424.9 478 57.9
Oeu038315.2 Olea europaea HOM05D006616 ORTHO05D008435 9.6e-117 424.9 599 49.9
Sabra06G0021500 Salix brachista HOM05D006616 ORTHO05D008435 1.3e-116 424.5 455 60.4
Ah.13g077310 Amaranthus hybridus HOM05D006616 ORTHO05D008435 1.8e-115 420.6 484 53.7
CAN.G526.15 Capsicum annuum HOM05D006616 ORTHO05D008435 5.3e-115 419.1 564 52.1
Peaxi162Scf00066g00130 Petunia axillaris HOM05D006616 ORTHO05D008435 5.3e-115 419.1 558 52.7
THA.LOC104815412 Tarenaya hassleriana HOM05D006616 ORTHO05D008435 1.2e-114 417.9 456 57.5
Hund19065 Selenicereus undatus HOM05D006616 ORTHO05D008435 1.5e-114 417.5 459 58.2
Psat6g087360 Pisum sativum HOM05D006616 ORTHO05D008435 3.4e-114 416.4 457 58.4
Aqoxy3G00148 Aquilegia oxysepala HOM05D006616 ORTHO05D008435 7.6e-114 415.2 473 58.1
AUR62021025 Chenopodium quinoa HOM05D006616 ORTHO05D008435 9.9e-114 414.8 470 57.2
Lalb_Chr21g0316821 Lupinus albus HOM05D006616 ORTHO05D008435 3.8e-113 412.9 472 56.1
Medtr1g051155 Medicago truncatula HOM05D006616 ORTHO05D008435 3.8e-113 412.9 482 55.4
MD00G1150000 Malus domestica HOM05D006616 ORTHO05D008435 1.1e-112 411.4 517 53.8
TPR.G13802 Trifolium pratense HOM05D006616 ORTHO05D008435 1.1e-112 411.4 460 57.2
Glyma.02G162000 Glycine max HOM05D006616 ORTHO05D008435 3.2e-112 409.8 561 51.7
Thecc.05G123900 Theobroma cacao HOM05D006616 ORTHO05D008435 5.5e-112 409.1 462 56.1
Aa31LG3G1010 Aethionema arabicum HOM05D006616 ORTHO05D008435 1.0e-110 404.8 455 56.7
AUR62018417 Chenopodium quinoa HOM05D006616 ORTHO05D008435 1.3e-110 404.4 585 49.4
DCAR_014373 Daucus carota HOM05D006616 ORTHO05D008435 1.3e-110 404.4 622 49.7
arahy.Tifrunner.gnm1.ann1.958W0C Arachis hypogaea HOM05D006616 ORTHO05D008435 2.3e-110 403.7 603 49.1
Duzib128G1745 Durio zibethinus HOM05D006616 ORTHO05D008435 3.9e-110 402.9 462 55.8
arahy.Tifrunner.gnm1.ann1.QA0LD5 Arachis hypogaea HOM05D006616 ORTHO05D008435 8.7e-110 401.7 603 49.3
Cfa019948 Carpinus fangiana HOM05D006616 ORTHO05D008435 8.7e-110 401.7 642 47.4
Os01g0916300 Oryza sativa ssp. japonica HOM05D006616 ORTHO05D008435 8.7e-110 401.7 516 51.4
FAN26G1972 Fragaria x ananassa HOM05D006616 ORTHO05D008435 1.5e-109 401.0 460 56.7
Gohir.A11G305800 Gossypium hirsutum HOM05D006616 ORTHO05D008435 1.5e-109 401.0 451 56.1
ATR0326G030 Amborella trichopoda HOM05D006616 ORTHO05D008435 7.4e-109 398.7 489 54.2
QL07p014063 Quercus lobata HOM05D006616 ORTHO05D008435 9.6e-109 398.3 585 48.9
CiPaw.10G044000 Carya illinoinensis HOM05D006616 ORTHO05D008435 1.6e-108 397.5 598 48.7
FAN28G1824 Fragaria x ananassa HOM05D006616 ORTHO05D008435 4.8e-108 396.0 457 56.2
Gorai.007G351400 Gossypium raimondii HOM05D006616 ORTHO05D008435 1.4e-107 394.4 451 55.7
Gohir.D11G321200 Gossypium hirsutum HOM05D006616 ORTHO05D008435 5.3e-107 392.5 450 55.6
Ciclev10011646m.g Citrus clementina HOM05D006616 ORTHO05D008435 5.8e-106 389.0 464 55.0
CDE04G3611 Ceratophyllum demersum HOM05D006616 ORTHO05D008435 2.2e-105 387.1 481 54.1
Solyc11g005110.3 Solanum lycopersicum HOM05D006616 ORTHO05D008435 2.9e-105 386.7 561 50.1
FAN19G2668 Fragaria x ananassa HOM05D006616 ORTHO05D008435 4.9e-105 386.0 461 55.5
Sopen11g001110 Solanum pennellii HOM05D006616 ORTHO05D008435 8.4e-105 385.2 561 50.3
PSO478G1375 Papaver somniferum HOM05D006616 ORTHO05D008435 3.2e-104 383.3 544 50.9
Zm00001eb364810 Zea mays HOM05D006616 ORTHO05D008435 3.2e-104 383.3 510 51.8
unitig_52.g17546 Utricularia gibba HOM05D006616 ORTHO05D008435 4.2e-104 382.9 467 53.7
CsaV3_3G040470 Cucumis sativus L. HOM05D006616 ORTHO05D008435 9.3e-104 381.7 500 53.0
AT2G41020 Arabidopsis thaliana HOM05D006616 ORTHO05D008435 1.2e-103 381.3 457 54.3
Thhalv10002504m.g Eutrema salsugineum HOM05D006616 ORTHO05D008435 1.6e-103 380.9 455 54.5
Sed0024074 Sechium edule HOM05D006616 ORTHO05D008435 1.6e-103 380.9 503 52.7
Sp4g23340 Schrenkiella parvula HOM05D006616 ORTHO05D008435 2.1e-103 380.6 464 54.5
AL4G39000 Arabidopsis lyrata HOM05D006616 ORTHO05D008435 1.3e-102 377.9 456 54.4
BcaC02g12875 Brassica carinata HOM05D006616 ORTHO05D008435 3.9e-102 376.3 467 54.0
C04p68740 Brassica napus HOM05D006616 ORTHO05D008435 1.1e-101 374.8 466 53.4
EL10Ac3g07308 Beta vulgaris HOM05D006616 ORTHO05D008435 1.6e-100 370.9 521 49.1
BraA04t18591Z Brassica rapa HOM05D006616 ORTHO05D002641 4.8e-100 369.4 445 54.6
HPP92_023122 Vanilla planifolia HOM05D006616 ORTHO05D008435 6.3e-100 369.0 560 48.8
A04p31340 Brassica napus HOM05D006616 ORTHO05D002641 3.1e-99 366.7 463 53.1
BolC4t28379H Brassica oleracea HOM05D006616 ORTHO05D008435 2.2e-97 360.5 459 52.5
Carub.0004s2335 Capsella rubella HOM05D006616 ORTHO05D008435 8.5e-97 358.6 456 53.9
CARHR136140 Cardamine hirsuta HOM05D006616 ORTHO05D008435 7.4e-93 345.5 426 54.9
PSO017G2359 Papaver somniferum HOM05D006616 ORTHO05D008435 1.9e-88 330.9 399 55.4
Nitab4.5_0001168g0150 Nicotiana tabacum HOM05D006616 ORTHO05D008435 1.0e-86 325.1 578 40.5
Pp3c10_1890 Physcomitrium patens HOM05D006616 ORTHO05D008435 3.1e-83 313.5 559 43.1
Pp3c10_1896 Physcomitrium patens HOM05D006616 ORTHO05D008435 3.1e-83 313.5 559 43.1
FvH4_1g29230 Fragaria vesca HOM05D006616 ORTHO05D008435 5.3e-83 312.8 447 51.5
Mapoly0043s0041 Marchantia polymorpha HOM05D006616 ORTHO05D008435 1.5e-82 311.2 580 43.3
ClCG10G015990 Citrullus lanatus HOM05D006616 ORTHO05D008435 3.7e-76 290.0 472 48.1
MELO3C009780.2 Cucumis melo HOM05D006616 ORTHO05D008435 1.6e-71 274.6 577 40.7
Haze_20291 Corylus avellana HOM05D006616 ORTHO05D008435 4.7e-71 273.1 894 33.8
Hma1.2p1_2178F.1_g316200 Hydrangea macrophylla HOM05D006616 ORTHO05D008435 1.0e-54 218.8 260 51.9
Nitab4.5_0003863g0020 Nicotiana tabacum HOM05D006616 ORTHO05D008435 6.6e-49 199.5 316 40.5
Sc13g0000840 Simmondsia chinensis HOM05D006616 ORTHO05D008435 1.1e-48 198.7 221 48.9
AagrBONN_evm.TU.Sc2ySwM_228.200 Anthoceros agrestis HOM05D006616 ORTHO05D008435 1.4e-46 191.8 287 41.5
SEGI_15760 Sequoiadendron giganteum HOM05D006616 ORTHO05D008435 3.2e-43 180.6 113 80.5
Nitab4.5_0003863g0030 Nicotiana tabacum HOM05D006616 ORTHO05D008435 7.3e-40 169.5 287 42.2
Cpa.g.sc33.190 Carica papaya HOM05D006616 ORTHO05D008435 5.2e-38 163.3 215 45.1
SEGI_28853 Sequoiadendron giganteum HOM05D006616 ORTHO05D008435 1.7e-36 158.3 451 38.4
Actinidia25416 Actinidia chinensis HOM05D006616 ORTHO05D008435 5.4e-35 153.3 229 42.8
SMO339G0010 Selaginella moellendorffii HOM05D006616 ORTHO05D008435 9.2e-35 152.5 97 78.4
vmacro00862 Vaccinium macrocarpon HOM05D006616 ORTHO05D008435 1.0e-33 149.1 110 72.7
FAN23G2418 Fragaria x ananassa HOM05D006616 ORTHO05D008435 1.6e-31 141.7 82 91.5
Psat1g016240 Pisum sativum HOM05D006616 ORTHO05D008435 2.9e-28 131.0 144 50.0
CBR_g8767 Chara braunii HOM05D006616 ORTHO05D008435 3.7e-28 130.6 410 32.9
Psat7g065560 Pisum sativum HOM05D006616 ORTHO05D008435 1.1e-27 129.0 144 49.3
COL.COLO4_33517 Corchorus olitorius HOM05D006616 ORTHO05D008435 2.7e-26 124.4 156 46.2
vmacro00863 Vaccinium macrocarpon HOM05D006616 ORTHO05D008435 1.0e-25 122.5 264 36.0
Migut.C01363 Erythranthe guttata HOM05D006616 ORTHO05D008435 1.1e-24 119.0 158 48.1
SHI24850 Sapria himalayana HOM05D006616 ORTHO05D008435 3.3e-24 117.5 150 46.0
MCO09G511 Micromonas commoda HOM05D006616 ORTHO05D008435 1.0e-17 95.9 339 35.4
Actinidia29490 Actinidia chinensis HOM05D006616 ORTHO05D008435 7.3e-16 89.7 291 29.2
Cre12.g527600 Chlamydomonas reinhardtii HOM05D006616 ORTHO05D008435 2.8e-15 87.8 56 71.4
MBI16_g47221_MAGBIO Magnolia biondii HOM05D006616 ORTHO05D008435 3.1e-14 84.3 163 38.0
PSO478G1191 Papaver somniferum HOM05D006616 ORTHO05D008435 4.4e-13 80.5 175 41.7
BcaC02g07966 Brassica carinata HOM05D001681 ORTHO05D001589 2.7e-10 71.2 50 72.0


User provided reference genes

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