Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr05g0148611 Helianthus annuus HOM05D006827 ORTHO05D008725 6.6e-147 524.2 310 100.0
Lsat_1_v5_gn_6_116121 Lactuca sativa HOM05D006827 ORTHO05D008725 2.2e-110 402.9 314 77.4
ECA246G4663 Erigeron canadensis HOM05D002153 ORTHO05D002137 6.3e-97 358.2 243 82.3
Dinv15137 Davidia involucrata HOM05D006827 ORTHO05D008725 9.4e-77 291.2 322 52.8
Nitab4.5_0002421g0010 Nicotiana tabacum HOM05D006827 ORTHO05D008725 1.1e-72 277.7 250 67.6
Gohir.A10G174600 Gossypium hirsutum HOM05D006827 ORTHO05D008725 2.4e-72 276.6 282 57.8
Gorai.011G202600 Gossypium raimondii HOM05D006827 ORTHO05D008725 2.4e-72 276.6 282 58.5
Manes.03G207700 Manihot esculenta HOM05D006827 ORTHO05D008725 3.1e-72 276.2 204 69.6
DCAR_023373 Daucus carota HOM05D006827 ORTHO05D008725 4.1e-72 275.8 253 60.9
Thecc.04G305900 Theobroma cacao HOM05D006827 ORTHO05D008725 4.1e-72 275.8 177 76.3
GSVIVG01034952001 Vitis vinifera HOM05D006827 ORTHO05D008725 5.3e-72 275.4 196 70.4
TWI53G1816 Tripterygium wilfordii HOM05D006827 ORTHO05D008725 9.1e-72 274.6 245 60.8
Solyc01g058190.4 Solanum lycopersicum HOM05D006827 ORTHO05D008725 1.6e-71 273.9 316 52.8
PGSC0003DMG400015968 Solanum tuberosum HOM05D006827 ORTHO05D008725 2.0e-71 273.5 315 55.9
MSTRG.3845 Avicennia marina HOM05D006827 ORTHO05D008725 3.5e-71 272.7 261 60.9
Cc03_g00540 Coffea canephora HOM05D006827 ORTHO05D008725 3.5e-71 272.7 315 52.4
Nitab4.5_0004047g0010 Nicotiana tabacum HOM05D006827 ORTHO05D008725 5.9e-71 271.9 316 59.2
Potri.008G101900 Populus trichocarpa HOM05D006827 ORTHO05D008725 7.7e-71 271.6 177 72.9
PGR031G1277 Punica granatum HOM05D006827 ORTHO05D008725 1.0e-70 271.2 176 76.7
Sopen01g023660 Solanum pennellii HOM05D006827 ORTHO05D008725 1.0e-70 271.2 250 62.4
CiPaw.01G134600 Carya illinoinensis HOM05D006827 ORTHO05D008725 2.2e-70 270.0 292 53.4
unitig_88.g27700 Utricularia gibba HOM05D006827 ORTHO05D008725 2.2e-70 270.0 221 61.1
Hma1.2p1_0516F.1_g170510 Hydrangea macrophylla HOM05D006827 ORTHO05D008725 3.8e-70 269.2 289 62.3
THA.LOC104820318 Tarenaya hassleriana HOM05D006827 ORTHO05D008725 3.8e-70 269.2 176 75.6
BcaB04g20857 Brassica carinata HOM05D006827 ORTHO05D008725 5.0e-70 268.9 176 75.0
Gohir.D10G181100 Gossypium hirsutum HOM05D006827 ORTHO05D008725 6.5e-70 268.5 251 62.5
Actinidia31567 Actinidia chinensis HOM05D006827 ORTHO05D008725 8.5e-70 268.1 204 65.2
Thhalv10021204m.g Eutrema salsugineum HOM05D006827 ORTHO05D008725 8.5e-70 268.1 176 73.3
TAR365G1248 Trochodendron aralioides HOM05D006827 ORTHO05D008725 8.5e-70 268.1 215 66.0
Oeu014225.1 Olea europaea HOM05D006827 ORTHO05D008725 1.1e-69 267.7 257 58.8
TWI09G0591 Tripterygium wilfordii HOM05D006827 ORTHO05D008725 1.1e-69 267.7 221 62.9
EL10Ac3g05552 Beta vulgaris HOM05D006827 ORTHO05D008725 1.5e-69 267.3 253 59.3
BcaC09g48673 Brassica carinata HOM05D006827 ORTHO05D008725 2.5e-69 266.5 176 74.4
BcaC09g48674 Brassica carinata HOM05D006827 ORTHO05D008725 2.5e-69 266.5 176 74.4
C01p47070 Brassica napus HOM05D006827 ORTHO05D008725 2.5e-69 266.5 176 74.4
arahy.Tifrunner.gnm1.ann1.W8AIPN Arachis hypogaea HOM05D006827 ORTHO05D008725 3.2e-69 266.2 230 60.9
Sp3g15370 Schrenkiella parvula HOM05D006827 ORTHO05D008725 3.2e-69 266.2 177 73.4
Cfa015277 Carpinus fangiana HOM05D006827 ORTHO05D008725 4.2e-69 265.8 278 59.7
Ca_00959_v3 Cicer arietinum L. HOM05D006827 ORTHO05D008725 5.5e-69 265.4 220 70.5
SGA_v2.0_scaffold227G43227 Striga asiatica HOM05D006827 ORTHO05D008725 5.5e-69 265.4 221 62.9
arahy.Tifrunner.gnm1.ann1.7T6EZL Arachis hypogaea HOM05D006827 ORTHO05D008725 7.2e-69 265.0 230 60.9
AL3G30170 Arabidopsis lyrata HOM05D006827 ORTHO05D008725 9.4e-69 264.6 171 74.9
QL06p013028 Quercus lobata HOM05D006827 ORTHO05D008725 9.4e-69 264.6 301 57.8
Aa31LG8G4170 Aethionema arabicum HOM05D006827 ORTHO05D008725 1.2e-68 264.2 176 72.7
A01p37130 Brassica napus HOM05D006827 ORTHO05D008725 1.2e-68 264.2 176 73.9
BolC1t04673H Brassica oleracea HOM05D006827 ORTHO05D008725 1.2e-68 264.2 176 73.9
BraA01t03774Z Brassica rapa HOM05D006827 ORTHO05D008725 1.2e-68 264.2 176 73.9
COL.COLO4_34569 Corchorus olitorius HOM05D001281 ORTHO05D001139 1.2e-68 264.2 241 59.8
ClCG06G004410 Citrullus lanatus HOM05D006827 ORTHO05D008725 2.1e-68 263.5 250 60.4
Sed0009970 Sechium edule HOM05D006827 ORTHO05D008725 2.1e-68 263.5 251 60.2
CARHR092440 Cardamine hirsuta HOM05D006827 ORTHO05D008725 2.7e-68 263.1 177 72.9
AUR62016245 Chenopodium quinoa HOM05D002153 ORTHO05D002137 3.6e-68 262.7 244 58.6
Duzib212G0426 Durio zibethinus HOM05D006827 ORTHO05D008725 3.6e-68 262.7 253 64.0
CANSAT78G0077 Cannabis sativa HOM05D006827 ORTHO05D008725 6.1e-68 261.9 220 63.2
Carub.0003s1692 Capsella rubella HOM05D006827 ORTHO05D008725 6.1e-68 261.9 171 74.3
Ah.13g071520 Amaranthus hybridus HOM05D006827 ORTHO05D008725 8.0e-68 261.5 253 60.1
MD13G1149000 Malus domestica HOM05D006827 ORTHO05D008725 8.0e-68 261.5 225 59.1
Prupe.1G113000 Prunus persica HOM05D006827 ORTHO05D008725 8.0e-68 261.5 291 57.7
Migut.N00027 Erythranthe guttata HOM05D006827 ORTHO05D008725 1.0e-67 261.2 254 57.5
MBI18_g27379_MAGBIO Magnolia biondii HOM05D006827 ORTHO05D008725 1.0e-67 261.2 283 52.3
CAN.G281.10 Capsicum annuum HOM05D006827 ORTHO05D008725 1.4e-67 260.8 306 55.2
Glyma.09G032900 Glycine max HOM05D001281 ORTHO05D008725 4.0e-67 259.2 222 60.4
AT3G17170 Arabidopsis thaliana HOM05D006827 ORTHO05D008725 5.2e-67 258.8 169 73.4
MELO3C021255.2 Cucumis melo HOM05D006827 ORTHO05D008725 6.8e-67 258.5 338 51.8
Glyma.15G137900 Glycine max HOM05D006827 ORTHO05D008725 2.0e-66 256.9 264 56.1
TPR.G33906 Trifolium pratense HOM05D006827 ORTHO05D008725 2.0e-66 256.9 220 62.3
Nn3g21791 Nelumbo nucifera HOM05D006827 ORTHO05D008725 3.4e-66 256.1 327 48.6
PSO210G0119 Papaver somniferum HOM05D006827 ORTHO05D008725 3.4e-66 256.1 176 69.9
FvH4_4g20660 Fragaria vesca HOM05D006827 ORTHO05D008725 7.5e-66 255.0 226 58.8
FAN12G3056 Fragaria x ananassa HOM05D006827 ORTHO05D008725 7.5e-66 255.0 226 58.8
PSO761G0463 Papaver somniferum HOM05D006827 ORTHO05D008725 1.3e-65 254.2 176 69.3
RcHm_v2.0_Chr4g0426061 Rosa chinensis HOM05D006827 ORTHO05D008725 1.7e-65 253.8 228 64.5
Ciclev10005460m.g Citrus clementina HOM05D006827 ORTHO05D008725 2.8e-65 253.1 244 61.1
Sc25g0003190 Simmondsia chinensis HOM05D006827 ORTHO05D008725 2.8e-65 253.1 223 63.7
Medtr2g033490 Medicago truncatula HOM05D006827 ORTHO05D008725 8.3e-65 251.5 261 60.2
Lj3A834T69 Lonicera japonica HOM05D006827 ORTHO05D008725 1.1e-64 251.1 171 72.5
Sabra08G0077100 Salix brachista HOM05D006827 ORTHO05D007631 1.4e-64 250.8 186 66.1
Lj6g0001147 Lotus japonicus HOM05D001281 ORTHO05D001139 1.8e-64 250.4 241 56.0
Phvul.006G120200 Phaseolus vulgaris HOM05D006827 ORTHO05D008725 1.8e-64 250.4 224 58.0
arahy.Tifrunner.gnm1.ann1.GV6LK0 Arachis hypogaea HOM05D006827 ORTHO05D008725 2.4e-64 250.0 231 58.9
FAN07G0118 Fragaria x ananassa HOM05D006827 ORTHO05D008725 2.4e-64 250.0 211 58.8
Eucgr.B03980 Eucalyptus grandis HOM05D006827 ORTHO05D008725 5.4e-64 248.8 306 52.0
Haze_01351 Corylus avellana HOM05D002153 ORTHO05D002137 9.1e-64 248.1 329 52.9
QL03p023650 Quercus lobata HOM05D006827 ORTHO05D008725 7.7e-63 245.0 344 50.0
ATR1120G107 Amborella trichopoda HOM05D006827 ORTHO05D008725 2.3e-62 243.4 182 65.9
Aqoxy2G02656 Aquilegia oxysepala HOM05D006827 ORTHO05D008725 3.8e-62 242.7 212 60.8
VMungo0540G1290 Vigna mungo HOM05D006827 ORTHO05D008725 3.8e-62 242.7 224 56.7
Zm00001eb136900 Zea mays HOM05D006827 ORTHO05D008725 6.5e-62 241.9 231 57.6
Hund11994 Selenicereus undatus HOM05D006827 ORTHO05D008725 8.6e-62 241.5 178 70.8
Rhsim04G0242100 Rhododendron simsii HOM05D006827 ORTHO05D008725 4.2e-61 239.2 230 58.3
Os12g0563200 Oryza sativa ssp. japonica HOM05D006827 ORTHO05D008725 7.2e-61 238.4 179 65.4
Peaxi162Scf00228g00735 Petunia axillaris HOM05D006827 ORTHO05D008725 6.1e-60 235.3 222 65.8
Psat1g161800 Pisum sativum HOM05D006827 ORTHO05D008725 1.4e-59 234.2 228 55.7
vmacro07963 Vaccinium macrocarpon HOM05D006827 ORTHO05D008725 1.3e-57 227.6 189 64.0
HPP92_027958 Vanilla planifolia HOM05D006827 ORTHO05D008725 6.3e-57 225.3 232 54.3
CAN.G582.1 Capsicum annuum HOM05D006827 ORTHO05D008725 1.8e-56 223.8 310 53.5
Lalb_Chr18g0058551 Lupinus albus HOM05D006827 ORTHO05D008725 7.0e-56 221.9 228 54.4
CsaV3_UNG230110 Cucumis sativus L. HOM05D006827 ORTHO05D008725 1.9e-53 213.8 149 72.5
CsaV3_6G028440 Cucumis sativus L. HOM05D006827 ORTHO05D008725 7.5e-50 201.8 267 49.8
Hma1.2p1_0013F.1_g008250 Hydrangea macrophylla HOM05D006827 ORTHO05D008725 8.0e-44 181.8 163 68.7
Atru.chr4.3069 Acer truncatum HOM05D006827 ORTHO05D008725 3.1e-43 179.9 204 57.4
MD16G1149200 Malus domestica HOM05D006827 ORTHO05D008725 9.2e-40 168.3 170 54.1
arahy.Tifrunner.gnm1.ann1.25F6GK Arachis hypogaea HOM05D006827 ORTHO05D008725 2.0e-34 150.6 160 53.1
SEGI_22692 Sequoiadendron giganteum HOM05D006827 ORTHO05D008725 1.1e-29 134.8 114 61.4
Mapoly0005s0049 Marchantia polymorpha HOM05D006827 ORTHO05D008725 1.9e-29 134.0 146 46.6
Pp3c14_11410 Physcomitrium patens HOM05D006827 ORTHO05D008725 1.2e-28 131.3 154 40.3
Pp3c14_11414 Physcomitrium patens HOM05D006827 ORTHO05D008725 1.2e-28 131.3 154 40.3
Cpa.g.sc9.7 Carica papaya HOM05D001281 ORTHO05D008725 6.4e-25 119.0 157 49.7
AUR62032776 Chenopodium quinoa HOM05D006827 ORTHO05D008725 4.1e-24 116.3 87 66.7
SMO351G0308 Selaginella moellendorffii HOM05D006827 ORTHO05D008725 6.6e-22 109.0 97 49.5
CBR_g38487 Chara braunii HOM05D006827 ORTHO05D008725 5.6e-21 105.9 142 38.7
BcaC05g28821 Brassica carinata HOM05D006827 ORTHO05D023991 2.9e-17 93.6 110 50.9
Psat7g189800 Pisum sativum HOM05D006827 ORTHO05D008725 4.2e-16 89.7 66 60.6
PRCOL_00004690 Prasinoderma coloniale HOM05D006827 ORTHO05D008725 6.6e-14 82.4 116 38.8
Hma1.2p1_0013F.1_g008240 Hydrangea macrophylla HOM05D006827 ORTHO05D008725 1.1e-13 81.6 58 69.0
A05p32600 Brassica napus HOM05D006827 ORTHO05D008725 2.1e-12 77.4 65 58.5
BraA05t22084Z Brassica rapa HOM05D006827 ORTHO05D008725 2.1e-12 77.4 65 58.5
Zm00001eb028550 Zea mays HOM05D006608 ORTHO05D008316 1.1e-11 75.1 123 38.2
C05p49280 Brassica napus HOM05D006827 ORTHO05D008725 5.3e-11 72.8 87 48.3
Ca_29226_v3 Cicer arietinum L. HOM05D006252 ORTHO05D008725 1.9e-08 64.3 83 38.6
Psat4g040600 Pisum sativum HOM05D006827 ORTHO05D008725 1.3e-06 58.2 129 31.0
BcaB06g25810 Brassica carinata HOM05D006827 ORTHO05D023991 2.3e-06 57.4 35 71.4


User provided reference genes

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