Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr05g0147781 Helianthus annuus HOM05D001489 ORTHO05D001380 1.5e-74 282.7 143 100.0
HanXRQChr06g0174871 Helianthus annuus HOM05D001489 ORTHO05D001380 5.1e-09 65.1 43 86.0
Dinv14764 Davidia involucrata HOM05D001489 ORTHO05D001380 6.6e-09 64.7 49 75.5
Sed0022221 Sechium edule HOM05D001489 ORTHO05D001380 1.1e-08 63.9 49 73.5
ECA246G5228 Erigeron canadensis HOM05D002970 ORTHO05D001380 1.5e-08 63.5 43 79.1
Lsat_1_v5_gn_4_2480 Lactuca sativa HOM05D001489 ORTHO05D001380 1.9e-08 63.2 43 81.4
ECA234G0083 Erigeron canadensis HOM05D001489 ORTHO05D001380 2.5e-08 62.8 43 79.1
GSVIVG01000597001 Vitis vinifera HOM05D001489 ORTHO05D001380 2.5e-08 62.8 43 83.7
ClCG08G017490 Citrullus lanatus HOM05D001489 ORTHO05D001380 4.3e-08 62.0 49 71.4
MELO3C010710.2 Cucumis melo HOM05D001489 ORTHO05D001380 4.3e-08 62.0 49 71.4
CsaV3_2G025130 Cucumis sativus L. HOM05D001489 ORTHO05D001380 4.3e-08 62.0 49 71.4
Lsat_1_v5_gn_3_29081 Lactuca sativa HOM05D001489 ORTHO05D001380 4.3e-08 62.0 43 81.4
TAR622G1276 Trochodendron aralioides HOM05D001489 ORTHO05D001380 4.3e-08 62.0 43 79.1
Manes.12G018500 Manihot esculenta HOM05D001489 ORTHO05D001380 5.6e-08 61.6 43 81.4
Duzib248G0600 Durio zibethinus HOM05D001489 ORTHO05D001380 7.3e-08 61.2 43 79.1
Duzib248G1054 Durio zibethinus HOM05D001489 ORTHO05D001380 7.3e-08 61.2 43 79.1
TAR371G1056 Trochodendron aralioides HOM05D001489 ORTHO05D001380 9.5e-08 60.8 43 79.1
PSO063G6347 Papaver somniferum HOM05D001489 ORTHO05D001380 1.2e-07 60.5 48 68.8
PSO782G5446 Papaver somniferum HOM05D001489 ORTHO05D001380 1.2e-07 60.5 48 68.8
Actinidia36149 Actinidia chinensis HOM05D001489 ORTHO05D001380 1.6e-07 60.1 43 79.1
COL.COLO4_23548 Corchorus olitorius HOM05D001489 ORTHO05D001380 1.6e-07 60.1 43 79.1
Duzib251G0632 Durio zibethinus HOM05D001489 ORTHO05D001380 1.6e-07 60.1 43 79.1
Nitab4.5_0000935g0070 Nicotiana tabacum HOM05D001489 ORTHO05D001380 1.6e-07 60.1 43 81.4
Nitab4.5_0001031g0190 Nicotiana tabacum HOM05D001489 ORTHO05D001380 1.6e-07 60.1 43 81.4
Sabra10G0018000 Salix brachista HOM05D001489 ORTHO05D001380 1.6e-07 60.1 43 79.1
Manes.13G019000 Manihot esculenta HOM05D001489 ORTHO05D001380 2.1e-07 59.7 43 79.1
CAN.G473.44 Capsicum annuum HOM05D001489 ORTHO05D001380 2.8e-07 59.3 48 70.8
Gohir.A03G042600 Gossypium hirsutum HOM05D001489 ORTHO05D001380 2.8e-07 59.3 43 79.1
Gohir.D03G125500 Gossypium hirsutum HOM05D001489 ORTHO05D001380 2.8e-07 59.3 43 79.1
Gorai.003G131700 Gossypium raimondii HOM05D001489 ORTHO05D001380 2.8e-07 59.3 43 79.1
Lj6g0021611 Lotus japonicus HOM05D001489 ORTHO05D001380 2.8e-07 59.3 43 74.4
Lalb_Chr11g0075611 Lupinus albus HOM05D001489 ORTHO05D001380 2.8e-07 59.3 43 74.4
Potri.010G052300 Populus trichocarpa HOM05D001489 ORTHO05D001380 2.8e-07 59.3 43 79.1
MSTRG.24055 Avicennia marina HOM05D001489 ORTHO05D001380 3.6e-07 58.9 43 76.7
Gohir.D03G125100 Gossypium hirsutum HOM05D001489 ORTHO05D001380 3.6e-07 58.9 43 79.1
Gorai.003G131200 Gossypium raimondii HOM05D001489 ORTHO05D001380 3.6e-07 58.9 43 79.1
Oeu023833.1 Olea europaea HOM05D001489 ORTHO05D001380 3.6e-07 58.9 43 76.7
Thecc.02G268700 Theobroma cacao HOM05D001489 ORTHO05D001380 3.6e-07 58.9 43 76.7
TWI36G0268 Tripterygium wilfordii HOM05D001489 ORTHO05D001380 3.6e-07 58.9 43 76.7
Actinidia05954 Actinidia chinensis HOM05D001489 ORTHO05D001380 4.7e-07 58.5 43 76.7
AT1G67730 Arabidopsis thaliana HOM05D001489 ORTHO05D001380 4.7e-07 58.5 43 72.1
Ca_25119_v3 Cicer arietinum L. HOM05D001489 ORTHO05D001380 4.7e-07 58.5 43 79.1
Lju41A45T59 Lonicera japonica HOM05D001489 ORTHO05D001380 4.7e-07 58.5 43 74.4
Prupe.1G239300 Prunus persica HOM05D001489 ORTHO05D001380 4.7e-07 58.5 43 76.7
RcHm_v2.0_Chr4g0432221 Rosa chinensis HOM05D001489 ORTHO05D001380 4.7e-07 58.5 48 68.8
TWI75G1783 Tripterygium wilfordii HOM05D001489 ORTHO05D001380 4.7e-07 58.5 43 74.4
Gohir.A03G042132 Gossypium hirsutum HOM05D001489 ORTHO05D001380 6.2e-07 58.2 43 76.7
HanXRQChr17g0569211 Helianthus annuus HOM05D001489 ORTHO05D001380 6.2e-07 58.2 43 76.7
Nn4g22489 Nelumbo nucifera HOM05D001489 ORTHO05D001380 6.2e-07 58.2 43 74.4
Oeu048596.1 Olea europaea HOM05D001489 ORTHO05D001380 6.2e-07 58.2 48 70.8
Peaxi162Scf00700g00231 Petunia axillaris HOM05D001489 ORTHO05D001380 6.2e-07 58.2 43 76.7
SGA_v2.0_scaffold18G08248 Striga asiatica HOM05D001489 ORTHO05D001380 6.2e-07 58.2 43 74.4
AL2G26430 Arabidopsis lyrata HOM05D001489 ORTHO05D001380 8.1e-07 57.8 43 72.1
BcaB03g15169 Brassica carinata HOM05D001489 ORTHO05D001380 8.1e-07 57.8 43 72.1
Ciclev10032140m.g Citrus clementina HOM05D001489 ORTHO05D001380 8.1e-07 57.8 43 79.1
MBI11_g19487_MAGBIO Magnolia biondii HOM05D001489 ORTHO05D001380 8.1e-07 57.8 43 74.4
MD13G1107000 Malus domestica HOM05D001489 ORTHO05D001380 8.1e-07 57.8 43 76.7
Medtr3g086210 Medicago truncatula HOM05D001489 ORTHO05D001380 8.1e-07 57.8 43 79.1
Nn3g16608 Nelumbo nucifera HOM05D001489 ORTHO05D001380 8.1e-07 57.8 43 72.1
Cc07_g00250 Coffea canephora HOM05D001489 ORTHO05D001380 1.1e-06 57.4 43 74.4
Sc14g0008890 Simmondsia chinensis HOM05D001489 ORTHO05D001380 1.1e-06 57.4 43 76.7
vmacro05907 Vaccinium macrocarpon HOM05D001489 ORTHO05D001380 1.1e-06 57.4 43 74.4
Aqoxy332s004 Aquilegia oxysepala HOM05D001489 ORTHO05D001380 1.4e-06 57.0 43 72.1
Aqoxy5G03613 Aquilegia oxysepala HOM05D001489 ORTHO05D001380 1.4e-06 57.0 43 72.1
Carub.0002s1416 Capsella rubella HOM05D001489 ORTHO05D001380 1.4e-06 57.0 43 72.1
Cc11_g16260 Coffea canephora HOM05D001489 ORTHO05D001380 1.4e-06 57.0 48 66.7
Glyma.18G011600 Glycine max HOM05D001489 ORTHO05D001380 1.4e-06 57.0 43 76.7
HanXRQChr15g0478231 Helianthus annuus HOM05D000194 ORTHO05D000069 1.4e-06 57.0 87 43.7
unitig_21.g20488 Utricularia gibba HOM05D001489 ORTHO05D001380 1.4e-06 57.0 43 72.1
VMungo1383G2735 Vigna mungo HOM05D001489 ORTHO05D001380 1.4e-06 57.0 43 76.7
BcaC08g46196 Brassica carinata HOM05D001489 ORTHO05D001380 1.8e-06 56.6 43 72.1
C06p42300 Brassica napus HOM05D001489 ORTHO05D001380 1.8e-06 56.6 43 72.1
BolC6t39199H Brassica oleracea HOM05D001489 ORTHO05D001380 1.8e-06 56.6 43 72.1
CSS0010705 Camellia sinensis var. sinensis HOM05D001489 ORTHO05D001380 1.8e-06 56.6 43 72.1
Cfa009272 Carpinus fangiana HOM05D001489 ORTHO05D001380 1.8e-06 56.6 43 72.1
Haze_12306 Corylus avellana HOM05D001489 ORTHO05D001380 1.8e-06 56.6 43 72.1
MD16G1107100 Malus domestica HOM05D001489 ORTHO05D001380 1.8e-06 56.6 43 74.4
SHI17873 Sapria himalayana HOM05D001489 ORTHO05D001380 1.8e-06 56.6 48 66.7
Solyc02g093640.3 Solanum lycopersicum HOM05D001489 ORTHO05D001380 1.8e-06 56.6 43 74.4
PGSC0003DMG400012642 Solanum tuberosum HOM05D001489 ORTHO05D001380 1.8e-06 56.6 43 74.4
Ah.02g130430 Amaranthus hybridus HOM05D001489 ORTHO05D001380 2.4e-06 56.2 43 72.1
MSTRG.15547 Avicennia marina HOM05D001489 ORTHO05D001380 2.4e-06 56.2 43 72.1
CANSAT01G0876 Cannabis sativa HOM05D001489 ORTHO05D001380 2.4e-06 56.2 43 72.1
CiPaw.06G064300 Carya illinoinensis HOM05D001489 ORTHO05D001380 2.4e-06 56.2 43 72.1
Dinv25707 Davidia involucrata HOM05D001489 ORTHO05D001380 2.4e-06 56.2 43 74.4
Sopen02g038270 Solanum pennellii HOM05D001489 ORTHO05D001380 2.4e-06 56.2 43 72.1
Migut.H00040 Erythranthe guttata HOM05D001489 ORTHO05D001380 3.1e-06 55.8 43 72.1
Eucgr.B03234 Eucalyptus grandis HOM05D001489 ORTHO05D001380 3.1e-06 55.8 43 74.4
Glyma.11G245600 Glycine max HOM05D001489 ORTHO05D001380 3.1e-06 55.8 43 74.4
Lalb_Chr08g0230801 Lupinus albus HOM05D001489 ORTHO05D001380 3.1e-06 55.8 43 74.4
Peaxi162Scf00420g00236 Petunia axillaris HOM05D001489 ORTHO05D001380 3.1e-06 55.8 43 74.4
Rhsim05G0107400 Rhododendron simsii HOM05D001489 ORTHO05D001380 3.1e-06 55.8 43 72.1
Hund06051 Selenicereus undatus HOM05D001489 ORTHO05D001380 3.1e-06 55.8 48 68.8
SGA_v2.0_scaffold154G37141 Striga asiatica HOM05D001489 ORTHO05D001380 3.1e-06 55.8 43 69.8
Atru.chr11.2202 Acer truncatum HOM05D001489 ORTHO05D001380 4.0e-06 55.5 48 64.6
Aa31LG4G12250 Aethionema arabicum HOM05D001489 ORTHO05D001380 4.0e-06 55.5 49 63.3
MSTRG.24056 Avicennia marina HOM05D001489 ORTHO05D001380 4.0e-06 55.5 43 72.1
DCAR_011281 Daucus carota HOM05D001489 ORTHO05D001380 4.0e-06 55.5 48 62.5
Thhalv10018890m.g Eutrema salsugineum HOM05D001489 ORTHO05D001380 4.0e-06 55.5 43 67.4
Phvul.001G257300 Phaseolus vulgaris HOM05D001489 ORTHO05D001380 4.0e-06 55.5 43 74.4
Psat5g093240 Pisum sativum HOM05D001489 ORTHO05D001380 4.0e-06 55.5 43 74.4
QL03p055910 Quercus lobata HOM05D001489 ORTHO05D001380 4.0e-06 55.5 43 72.1
Rhsim08G0047100 Rhododendron simsii HOM05D001489 ORTHO05D001380 4.0e-06 55.5 43 69.8
RhsimUnG0151000 Rhododendron simsii HOM05D001489 ORTHO05D001380 4.0e-06 55.5 43 69.8
Duzib268G0765 Durio zibethinus HOM05D001489 ORTHO05D001380 5.2e-06 55.1 43 74.4
FAN07G1059 Fragaria x ananassa HOM05D001489 ORTHO05D001380 5.2e-06 55.1 43 72.1
FAN17G0784 Fragaria x ananassa HOM05D001489 ORTHO05D001380 5.2e-06 55.1 43 72.1
FAN22G1245 Fragaria x ananassa HOM05D001489 ORTHO05D001380 5.2e-06 55.1 48 64.6
FAN22G1773 Fragaria x ananassa HOM05D001489 ORTHO05D001380 5.2e-06 55.1 48 64.6
Hund25418 Selenicereus undatus HOM05D001489 ORTHO05D001380 5.2e-06 55.1 43 72.1
TPR.G14241 Trifolium pratense HOM05D001489 ORTHO05D001380 5.2e-06 55.1 43 72.1
TAR624G0485 Trochodendron aralioides HOM05D001489 ORTHO05D001380 5.2e-06 55.1 43 69.8
arahy.Tifrunner.gnm1.ann1.0GWZ16 Arachis hypogaea HOM05D001489 ORTHO05D001380 6.8e-06 54.7 43 69.8
arahy.Tifrunner.gnm1.ann1.KTR7HF Arachis hypogaea HOM05D001489 ORTHO05D001380 6.8e-06 54.7 43 69.8
CAN.G326.17 Capsicum annuum HOM05D000450 ORTHO05D000327 6.8e-06 54.7 46 69.6
DCAR_021749 Daucus carota HOM05D001489 ORTHO05D001380 6.8e-06 54.7 43 69.8
Migut.K01427 Erythranthe guttata HOM05D001489 ORTHO05D001380 6.8e-06 54.7 43 69.8
Hma1.2p1_0079F.1_g041350 Hydrangea macrophylla HOM05D001489 ORTHO05D001380 6.8e-06 54.7 43 69.8
MSTRG.3274 Avicennia marina HOM05D001489 ORTHO05D001380 8.9e-06 54.3 43 69.8
FvH4_4g25050 Fragaria vesca HOM05D001489 ORTHO05D001380 8.9e-06 54.3 43 72.1
Lj3A1063T60 Lonicera japonica HOM05D001489 ORTHO05D001380 8.9e-06 54.3 48 62.5


User provided reference genes

Program Settings