Gene: Sopen02g038270
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen02g038270
- Transcript Identifier Sopen02g038270.1
- Gene Type Coding gene
- Location Spenn-ch02 : 58877884-58880018 : negative
Gene Family Information
- ID HOM05D001489
- #Genes/#Species 425/99
- Phylogenetic origin
- ID ORTHO05D001380
- #Genes/#Species 419/99
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Sopen02g038270.1
Descriptions
- Description Encodes one of the two Arabidopsis homologues to YBR159w encoding a S. cerevisiae beta-ketoacyl reductase (KCR), which catalyzes the first reduction during VLCFA (very long chain fatty acids, 18 carbon) elongation: KCR1 (At1g67730), KCR2 (At1g24470). Complementation of the yeast ybr159Delta mutant demonstrated that the two KCR proteins are divergent and that only AtKCR1 can restore heterologous elongase activity similar to the native yeast KCR gene. | beta-ketoacyl reductase 1 (KCR1) | FUNCTIONS IN: oxidoreductase activity, ketoreductase activity, acetoacetyl-CoA reductase activity | INVOLVED IN: very long-chain fatty acid biosynthetic process, embryo development, cuticle development | LOCATED IN: endoplasmic reticulum, membrane | EXPRESSED IN: 26 plant structures | EXPRESSED DURING: 14 growth stages | CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site , NAD(P)-binding domain , Glucose/ribitol dehydrogenase , Short-chain dehydrogenase/reductase SDR | BEST Arabidopsis thaliana protein match is: beta-ketoacyl reductase 2
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0009793 | ISO | PLAZA Integrative Orthology | embryo development ending in seed dormancy | AT1G67730 |
GO:0042761 | ISO | PLAZA Integrative Orthology | very long-chain fatty acid biosynthetic process | AT1G67730 |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0016491 | IEA | InterPro | oxidoreductase activity | |
GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT1G67730 |
GO:0018454 | ISO | PLAZA Integrative Orthology | acetoacetyl-CoA reductase activity | AT1G67730 |
GO:0045703 | ISO | PLAZA Integrative Orthology | ketoreductase activity | AT1G67730 |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0005783 | ISO | PLAZA Integrative Orthology | endoplasmic reticulum | AT1G67730 |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
Mapman id | Description |
---|---|
5.1.6.1.1 | Lipid metabolism.fatty acid biosynthesis.endoplasmic reticulum-localized fatty acid elongase (FAE) system.fatty acid elongation complex.3-ketoacyl-CoA reductase (KCR) |