Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr05g0141721 Helianthus annuus HOM05D006533 ORTHO05D008625 6.1e-208 727.2 370 100.0
Lsat_1_v5_gn_9_47461 Lactuca sativa HOM05D006533 ORTHO05D008625 4.3e-161 571.6 385 77.1
ECA232G2080 Erigeron canadensis HOM05D006533 ORTHO05D008625 3.6e-160 568.5 390 77.2
MSTRG.8576 Avicennia marina HOM05D006533 ORTHO05D008625 3.1e-135 485.7 401 65.3
Oeu060384.1 Olea europaea HOM05D006533 ORTHO05D008625 9.0e-135 484.2 401 65.8
Actinidia34305 Actinidia chinensis HOM05D006533 ORTHO05D008625 1.2e-134 483.8 390 67.7
Cc02_g00290 Coffea canephora HOM05D006533 ORTHO05D008625 2.0e-134 483.0 398 64.6
Sopen02g038900 Solanum pennellii HOM05D006533 ORTHO05D008625 1.7e-133 479.9 410 63.2
SGA_v2.0_scaffold18G08508 Striga asiatica HOM05D006533 ORTHO05D008625 3.8e-133 478.8 397 62.7
Solyc02g094260.1 Solanum lycopersicum HOM05D006533 ORTHO05D008625 8.5e-133 477.6 410 62.7
PGSC0003DMG400020249 Solanum tuberosum HOM05D006533 ORTHO05D008625 8.5e-133 477.6 409 63.3
CiPaw.06G033000 Carya illinoinensis HOM05D006533 ORTHO05D008625 1.9e-132 476.5 396 65.2
RcHm_v2.0_Chr1g0384131 Rosa chinensis HOM05D006533 ORTHO05D008625 5.5e-132 474.9 401 64.1
Eucgr.K00088 Eucalyptus grandis HOM05D006533 ORTHO05D008625 2.7e-131 472.6 402 64.2
QL09p024067 Quercus lobata HOM05D006533 ORTHO05D008625 2.7e-131 472.6 392 64.8
FvH4_7g33920 Fragaria vesca HOM05D006533 ORTHO05D008625 3.0e-130 469.2 402 62.7
GSVIVG01024411001 Vitis vinifera HOM05D006533 ORTHO05D008625 2.0e-129 466.5 403 62.3
AUR62002060 Chenopodium quinoa HOM05D006533 ORTHO05D008625 4.3e-129 465.3 411 61.3
FAN10G3989 Fragaria x ananassa HOM05D006533 ORTHO05D008625 1.7e-128 463.4 402 61.7
AUR62028174 Chenopodium quinoa HOM05D006533 ORTHO05D008625 3.7e-128 462.2 412 61.4
Migut.F00098 Erythranthe guttata HOM05D006533 ORTHO05D008625 3.7e-128 462.2 408 62.5
Ciclev10020455m.g Citrus clementina HOM05D006533 ORTHO05D008625 3.1e-127 459.1 407 63.1
FAN03G0602 Fragaria x ananassa HOM05D006533 ORTHO05D008625 5.3e-127 458.4 402 61.9
Prupe.2G325700 Prunus persica HOM05D006533 ORTHO05D008625 1.7e-125 453.4 404 62.6
Thecc.01G135900 Theobroma cacao HOM05D006533 ORTHO05D008625 1.7e-125 453.4 381 64.0
Glyma.01G228300 Glycine max HOM05D006533 ORTHO05D008625 5.0e-125 451.8 398 62.1
CANSAT56G1022 Cannabis sativa HOM05D006533 ORTHO05D008625 1.1e-124 450.7 414 60.4
Lj3A887G72 Lonicera japonica HOM05D006533 ORTHO05D008625 1.1e-124 450.7 376 64.6
Nitab4.5_0001510g0030 Nicotiana tabacum HOM05D006533 ORTHO05D008625 1.1e-124 450.7 432 58.8
CANSAT56G3916 Cannabis sativa HOM05D006533 ORTHO05D008625 1.9e-124 449.9 414 60.1
Gohir.A09G004900 Gossypium hirsutum HOM05D006533 ORTHO05D008625 1.9e-124 449.9 389 62.7
Lj6g0021866 Lotus japonicus HOM05D006533 ORTHO05D008625 1.9e-124 449.9 402 61.2
arahy.Tifrunner.gnm1.ann1.NII7HE Arachis hypogaea HOM05D006533 ORTHO05D008625 3.2e-124 449.1 388 62.1
Gorai.006G005800 Gossypium raimondii HOM05D006533 ORTHO05D008625 4.2e-124 448.7 389 62.5
Gohir.D09G004200 Gossypium hirsutum HOM05D006533 ORTHO05D008625 5.5e-124 448.4 389 62.5
THA.LOC104820882 Tarenaya hassleriana HOM05D006533 ORTHO05D008625 5.5e-124 448.4 376 63.3
Ca_24442_v3 Cicer arietinum L. HOM05D006533 ORTHO05D008625 7.2e-124 448.0 394 63.2
MD07G1308500 Malus domestica HOM05D006533 ORTHO05D008625 7.9e-123 444.5 404 61.6
Phvul.002G039600 Phaseolus vulgaris HOM05D006533 ORTHO05D008625 1.4e-122 443.7 402 61.2
Sabra13G0070900 Salix brachista HOM05D006533 ORTHO05D008625 5.1e-122 441.8 411 58.9
Potri.013G082000 Populus trichocarpa HOM05D006533 ORTHO05D008625 4.4e-121 438.7 411 58.4
Glyma.11G011100 Glycine max HOM05D006533 ORTHO05D008625 5.7e-121 438.3 400 61.2
Lalb_Chr09g0320221 Lupinus albus HOM05D006533 ORTHO05D008625 9.7e-121 437.6 394 61.7
Sed0002742 Sechium edule HOM05D006533 ORTHO05D008625 1.7e-120 436.8 395 60.3
Atru.chr1.2781 Acer truncatum HOM05D006533 ORTHO05D008625 2.8e-120 436.0 402 60.7
AL6G27960 Arabidopsis lyrata HOM05D006533 ORTHO05D008625 2.8e-120 436.0 386 60.9
arahy.Tifrunner.gnm1.ann1.YJZS8S Arachis hypogaea HOM05D006533 ORTHO05D008625 3.7e-120 435.6 414 59.2
CARHR196200 Cardamine hirsuta HOM05D006533 ORTHO05D008625 6.3e-120 434.9 386 60.4
PGR142G1840 Punica granatum HOM05D006533 ORTHO05D008625 8.2e-120 434.5 406 61.1
Sc06g0002540 Simmondsia chinensis HOM05D006533 ORTHO05D008625 5.3e-119 431.8 390 61.3
Medtr5g007700 Medicago truncatula HOM05D006533 ORTHO05D008625 1.5e-118 430.3 394 60.4
Psat2g188880 Pisum sativum HOM05D006533 ORTHO05D008625 1.5e-118 430.3 392 61.5
EL10Ac3g05080 Beta vulgaris HOM05D006533 ORTHO05D008625 2.0e-118 429.9 424 55.9
ClCG05G007010 Citrullus lanatus HOM05D006533 ORTHO05D008625 2.0e-118 429.9 415 57.6
Cpa.g.sc39.72 Carica papaya HOM05D006533 ORTHO05D008625 4.5e-118 428.7 360 65.3
Ah.04g156530 Amaranthus hybridus HOM05D006533 ORTHO05D008625 7.7e-118 427.9 384 60.7
Aa31LG11G12640 Aethionema arabicum HOM05D006533 ORTHO05D008625 1.3e-117 427.2 377 59.9
CsaV3_3G015700 Cucumis sativus L. HOM05D006533 ORTHO05D008625 3.8e-117 425.6 415 57.6
Hma1.2p1_3802F.1_g337635 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 1.5e-116 423.7 334 65.9
CSS0012834 Camellia sinensis var. sinensis HOM05D006533 ORTHO05D008625 1.9e-116 423.3 392 60.2
SalBow4G2334 Salvia bowleyana HOM05D006533 ORTHO05D008625 4.7e-115 418.7 397 56.9
Peaxi162Scf00133g00721 Petunia axillaris HOM05D006533 ORTHO05D008625 1.8e-114 416.8 393 60.1
vmacro06509 Vaccinium macrocarpon HOM05D006533 ORTHO05D008625 6.7e-114 414.8 393 60.1
unitig_0.g2430 Utricularia gibba HOM05D006533 ORTHO05D008625 8.8e-114 414.5 379 57.8
PSO063G2320 Papaver somniferum HOM05D006533 ORTHO05D008625 3.3e-113 412.5 388 55.9
Nitab4.5_0005342g0010 Nicotiana tabacum HOM05D006533 ORTHO05D008625 2.8e-112 409.5 455 52.3
VMungo1215G1087 Vigna mungo HOM05D006533 ORTHO05D008625 8.2e-112 407.9 380 59.7
CAN.G473.117 Capsicum annuum HOM05D006533 ORTHO05D008625 1.8e-111 406.8 362 63.0
Cfa006012 Carpinus fangiana HOM05D006533 ORTHO05D008625 1.8e-111 406.8 398 59.0
Hund09790 Selenicereus undatus HOM05D006533 ORTHO05D008625 4.1e-111 405.6 399 56.9
Aqoxy3G02101 Aquilegia oxysepala HOM05D006533 ORTHO05D008625 2.6e-110 402.9 392 55.4
Medtr5g061700 Medicago truncatula HOM05D006533 ORTHO05D008625 1.9e-108 396.7 394 58.1
Manes.09G124800 Manihot esculenta HOM05D006533 ORTHO05D008625 5.5e-108 395.2 396 56.3
Duzib264G0907 Durio zibethinus HOM05D006533 ORTHO05D008625 9.4e-108 394.4 389 57.8
Sabra06G0125800 Salix brachista HOM05D006533 ORTHO05D008625 1.2e-107 394.0 411 54.7
Dinv17259 Davidia involucrata HOM05D006533 ORTHO05D008625 2.3e-106 389.8 311 67.5
TAR374G0999 Trochodendron aralioides HOM05D006533 ORTHO05D008625 5.7e-105 385.2 401 55.6
COL.COLO4_35796 Corchorus olitorius HOM05D006533 ORTHO05D008625 2.8e-104 382.9 384 55.7
DCAR_009009 Daucus carota HOM05D006533 ORTHO05D008625 4.8e-104 382.1 340 63.2
PSO782G0079 Papaver somniferum HOM05D006533 ORTHO05D008625 3.1e-103 379.4 364 55.5
Nn1g01934 Nelumbo nucifera HOM05D006533 ORTHO05D008625 5.0e-101 372.1 400 53.5
LjContig00222g0024674 Lotus japonicus HOM05D006533 ORTHO05D008625 8.5e-101 371.3 352 59.4
ATR0829G094 Amborella trichopoda HOM05D006533 ORTHO05D008625 2.1e-99 366.7 414 50.2
HPP92_005443 Vanilla planifolia HOM05D006533 ORTHO05D008625 2.1e-99 366.7 389 51.2
MBI04_g36026_MAGBIO Magnolia biondii HOM05D006533 ORTHO05D008625 1.2e-97 360.9 395 52.9
MELO3C006767.2 Cucumis melo HOM05D006533 ORTHO05D008625 4.9e-96 355.5 429 51.0
Rhsim03G0221300 Rhododendron simsii HOM05D006533 ORTHO05D008625 6.6e-93 345.1 405 52.3
Hma1.2p1_0758F.1_g213747 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 2.3e-90 336.7 327 57.2
SalBow4G1971 Salvia bowleyana HOM05D006533 ORTHO05D008625 8.9e-90 334.7 347 53.9
Os06g0114600 Oryza sativa ssp. japonica HOM05D006533 ORTHO05D008625 4.9e-88 328.9 353 49.0
Hma1.2p1_0758F.1_g213741 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 1.8e-87 327.0 334 55.7
CDE11G1068 Ceratophyllum demersum HOM05D006533 ORTHO05D004827 2.4e-87 326.6 352 53.1
Hma1.2p1_0758F.1_g213730 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 3.2e-87 326.2 336 55.4
Mapoly0015s0191 Marchantia polymorpha HOM05D006533 ORTHO05D008625 5.6e-84 315.5 455 41.3
Hma1.2p1_0758F.1_g213704 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 7.3e-84 315.1 295 58.6
SMO340G0278 Selaginella moellendorffii HOM05D006533 ORTHO05D008625 3.6e-83 312.8 395 44.1
Hma1.2p1_0758F.1_g213725 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 4.7e-83 312.4 295 58.3
Hma1.2p1_0758F.1_g213746 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 4.7e-83 312.4 295 58.3
Hma1.2p1_3802F.1_g337637 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 4.7e-83 312.4 295 58.3
Pp3c15_5730 Physcomitrium patens HOM05D006533 ORTHO05D008625 2.0e-81 307.0 429 43.4
Zm00001eb268960 Zea mays HOM05D006533 ORTHO05D008625 1.3e-77 294.3 326 48.5
TPR.G22023 Trifolium pratense HOM05D006533 ORTHO05D008625 2.6e-73 280.0 206 71.4
QL09p024429 Quercus lobata HOM05D006533 ORTHO05D008625 5.4e-71 272.3 262 59.2
Psat2g075360 Pisum sativum HOM05D006533 ORTHO05D008625 2.5e-68 263.5 293 51.5
arahy.Tifrunner.gnm1.ann1.1W8L1U Arachis hypogaea HOM05D006533 ORTHO05D008625 2.3e-61 240.4 188 67.6
SEGI_31434 Sequoiadendron giganteum HOM05D006533 ORTHO05D008625 2.5e-60 236.9 235 54.9
TPR.G37965 Trifolium pratense HOM05D006533 ORTHO05D008625 3.3e-60 236.5 262 51.9
CBR_g24301 Chara braunii HOM05D006533 ORTHO05D008625 6.0e-46 189.1 364 35.7
FAN01G0029 Fragaria x ananassa HOM05D006533 ORTHO05D008625 5.7e-28 129.4 87 77.0
MBI06_g38701_MAGBIO Magnolia biondii HOM05D006533 ORTHO05D008625 5.3e-26 122.9 131 51.9
HPP92_005432 Vanilla planifolia HOM05D006533 ORTHO05D008625 9.0e-26 122.1 177 39.5
SEGI_03149 Sequoiadendron giganteum HOM05D006533 ORTHO05D008625 7.6e-25 119.0 205 39.0
MBI06_g38702_MAGBIO Magnolia biondii HOM05D006533 ORTHO05D008625 4.8e-19 99.8 125 45.6
MBI12_g01582_MAGBIO Magnolia biondii HOM05D006533 ORTHO05D008625 1.1e-18 98.6 160 36.9
Hma1.2p1_0649F.1_g195356 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 7.7e-09 65.9 59 67.8
Hma1.2p1_0649F.1_g195390 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 7.7e-09 65.9 59 67.8
Hma1.2p1_3802F.1_g337632 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 7.7e-09 65.9 59 67.8


User provided reference genes

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