Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr05g0138301 Helianthus annuus HOM05D006224 ORTHO05D007691 1.8e-226 788.9 384 100.0
HanXRQChr05g0139161 Helianthus annuus HOM05D006224 ORTHO05D007691 7.9e-174 614.0 363 87.1
Lsat_1_v5_gn_8_94740 Lactuca sativa HOM05D006224 ORTHO05D007691 1.5e-169 599.7 398 76.4
Dinv41578 Davidia involucrata HOM05D006224 ORTHO05D007691 2.5e-143 512.7 330 73.3
ECA236G3755 Erigeron canadensis HOM05D006224 ORTHO05D007691 9.1e-138 494.2 279 85.7
Actinidia07421 Actinidia chinensis HOM05D006224 ORTHO05D007691 2.0e-137 493.0 368 65.5
QL02p086060 Quercus lobata HOM05D006224 ORTHO05D007691 6.5e-136 488.0 377 63.4
Cfa003290 Carpinus fangiana HOM05D006224 ORTHO05D007691 3.2e-135 485.7 350 66.6
Cc06_g09350 Coffea canephora HOM05D006224 ORTHO05D007691 1.6e-134 483.4 318 71.1
QL02p086023 Quercus lobata HOM05D006224 ORTHO05D007691 3.0e-133 479.2 380 62.9
vmacro06195 Vaccinium macrocarpon HOM05D006224 ORTHO05D007691 4.4e-132 475.3 407 59.5
Eucgr.E02819 Eucalyptus grandis HOM05D006224 ORTHO05D007691 7.4e-132 474.6 337 69.4
DCAR_010440 Daucus carota HOM05D006224 ORTHO05D007691 1.3e-131 473.8 321 68.5
Manes.16G071100 Manihot esculenta HOM05D006224 ORTHO05D007691 1.3e-131 473.8 330 70.0
Migut.K00473 Erythranthe guttata HOM05D006224 ORTHO05D007691 1.8e-130 469.9 381 61.7
CANSAT56G1593 Cannabis sativa HOM05D006224 ORTHO05D007691 3.1e-130 469.2 360 65.3
GSVIVG01015429001 Vitis vinifera HOM05D006224 ORTHO05D007691 9.1e-130 467.6 373 62.2
GSVIVG01015431001 Vitis vinifera HOM05D006224 ORTHO05D007691 2.0e-129 466.5 363 62.3
Atru.chr7.1298 Acer truncatum HOM05D006224 ORTHO05D007691 2.6e-129 466.1 342 65.2
CANSAT56G0016 Cannabis sativa HOM05D006224 ORTHO05D007691 4.5e-129 465.3 360 65.0
Nitab4.5_0013433g0030 Nicotiana tabacum HOM05D006224 ORTHO05D007691 4.5e-129 465.3 362 63.8
Hund26119 Selenicereus undatus HOM05D006224 ORTHO05D007691 4.5e-129 465.3 366 60.9
TWI34G0303 Tripterygium wilfordii HOM05D006224 ORTHO05D007691 4.5e-129 465.3 365 63.3
Gorai.004G279400 Gossypium raimondii HOM05D006224 ORTHO05D007691 1.3e-128 463.8 352 63.9
Gohir.D08G261300 Gossypium hirsutum HOM05D006224 ORTHO05D007691 2.9e-128 462.6 352 63.6
TAR383G0021 Trochodendron aralioides HOM05D006224 ORTHO05D007691 2.9e-128 462.6 320 68.1
Haze_25683 Corylus avellana HOM05D006224 ORTHO05D007691 3.8e-128 462.2 397 59.2
VMungo0464G0392 Vigna mungo HOM05D006224 ORTHO05D007691 5.0e-128 461.8 368 62.2
Ciclev10008608m.g Citrus clementina HOM05D006224 ORTHO05D007691 6.5e-128 461.5 376 61.4
Rhsim03G0244800 Rhododendron simsii HOM05D006224 ORTHO05D007691 6.5e-128 461.5 434 55.5
TWI34G1467 Tripterygium wilfordii HOM05D006224 ORTHO05D007691 3.2e-127 459.1 332 65.7
Glyma.09G187600 Glycine max HOM05D006224 ORTHO05D007691 5.5e-127 458.4 372 61.3
Thecc.09G114600 Theobroma cacao HOM05D006224 ORTHO05D007691 7.2e-127 458.0 335 65.1
Sopen07g017160 Solanum pennellii HOM05D006224 ORTHO05D007691 9.4e-127 457.6 374 62.6
Nitab4.5_0002361g0030 Nicotiana tabacum HOM05D006224 ORTHO05D007691 1.2e-126 457.2 315 70.2
Solyc07g009170.4 Solanum lycopersicum HOM05D006224 ORTHO05D007691 2.1e-126 456.4 374 62.6
Lalb_Chr14g0371331 Lupinus albus HOM05D006224 ORTHO05D007691 3.6e-126 455.7 325 68.0
arahy.Tifrunner.gnm1.ann1.X15ZNM Arachis hypogaea HOM05D006224 ORTHO05D007691 4.7e-126 455.3 364 62.4
Ca_30117_v3 Cicer arietinum L. HOM05D006224 ORTHO05D007691 4.7e-126 455.3 357 63.6
PSO782G3139 Papaver somniferum HOM05D006224 ORTHO05D007691 4.7e-126 455.3 324 67.0
Phvul.004G160700 Phaseolus vulgaris HOM05D006224 ORTHO05D007691 4.7e-126 455.3 372 61.0
PGSC0003DMG400024204 Solanum tuberosum HOM05D006224 ORTHO05D007691 1.0e-125 454.1 373 61.4
PSO063G0773 Papaver somniferum HOM05D006224 ORTHO05D007691 1.4e-125 453.8 324 66.7
Gohir.A08G240600 Gossypium hirsutum HOM05D006224 ORTHO05D007691 2.3e-125 453.0 344 63.1
MD15G1189600 Malus domestica HOM05D006224 ORTHO05D007691 2.3e-125 453.0 362 62.4
arahy.Tifrunner.gnm1.ann1.NKB3PQ Arachis hypogaea HOM05D006224 ORTHO05D007691 4.0e-125 452.2 366 62.6
CiPaw.03G235000 Carya illinoinensis HOM05D006224 ORTHO05D007691 5.2e-125 451.8 358 63.7
Lj2g0020407 Lotus japonicus HOM05D006224 ORTHO05D007691 5.2e-125 451.8 361 62.6
SalBow1G0968 Salvia bowleyana HOM05D006224 ORTHO05D007691 8.8e-125 451.1 340 63.8
MELO3C025318.2 Cucumis melo HOM05D006224 ORTHO05D007691 3.3e-124 449.1 358 61.7
Sed0009228 Sechium edule HOM05D006224 ORTHO05D007691 3.3e-124 449.1 349 62.8
AUR62011028 Chenopodium quinoa HOM05D006224 ORTHO05D007691 4.4e-124 448.7 346 61.3
FvH4_1g05360 Fragaria vesca HOM05D006224 ORTHO05D007691 4.4e-124 448.7 327 66.7
Medtr6g086510 Medicago truncatula HOM05D006224 ORTHO05D007691 4.4e-124 448.7 343 65.0
PGR042G0994 Punica granatum HOM05D006224 ORTHO05D007691 5.7e-124 448.4 395 58.7
ClCG06G010400 Citrullus lanatus HOM05D006224 ORTHO05D007691 9.7e-124 447.6 315 66.3
CSS0033373 Camellia sinensis var. sinensis HOM05D006224 ORTHO05D007691 1.3e-123 447.2 390 59.0
RcHm_v2.0_Chr2g0091041 Rosa chinensis HOM05D006224 ORTHO05D007691 1.3e-123 447.2 340 65.0
ClCG00G002210 Citrullus lanatus HOM05D006224 ORTHO05D007691 1.1e-122 444.1 314 67.5
ClCG06G010410 Citrullus lanatus HOM05D006224 ORTHO05D007691 1.1e-122 444.1 314 67.5
CsaV3_1G030820 Cucumis sativus L. HOM05D006224 ORTHO05D007691 1.1e-122 444.1 371 59.3
Glyma.18G076000 Glycine max HOM05D006224 ORTHO05D007691 1.4e-122 443.7 361 61.8
FAN23G1546 Fragaria x ananassa HOM05D006224 ORTHO05D007691 1.8e-122 443.4 374 61.0
FAN19G0264 Fragaria x ananassa HOM05D006224 ORTHO05D007691 3.1e-122 442.6 332 65.4
Cpa.g.sc23.139 Carica papaya HOM05D006224 ORTHO05D007691 7.0e-122 441.4 375 60.3
Zm00001eb309830 Zea mays HOM05D006224 ORTHO05D007691 7.0e-122 441.4 344 61.6
ATR0037G051 Amborella trichopoda HOM05D006224 ORTHO05D007691 2.0e-121 439.9 319 63.9
MBI06_g04550_MAGBIO Magnolia biondii HOM05D006224 ORTHO05D007691 7.7e-121 438.0 357 59.7
Thhalv10013889m.g Eutrema salsugineum HOM05D006224 ORTHO05D007691 1.7e-120 436.8 356 60.7
FAN26G2363 Fragaria x ananassa HOM05D006224 ORTHO05D007691 1.7e-120 436.8 380 59.2
Duzib187G0885 Durio zibethinus HOM05D006224 ORTHO05D007691 2.2e-120 436.4 380 58.9
Potri.006G157700 Populus trichocarpa HOM05D006224 ORTHO05D007691 2.9e-120 436.0 336 64.3
Aa31LG11G5060 Aethionema arabicum HOM05D006224 ORTHO05D007691 3.8e-120 435.6 321 65.4
Aqoxy5G03788 Aquilegia oxysepala HOM05D006224 ORTHO05D007691 3.8e-120 435.6 332 63.0
AT5G19460 Arabidopsis thaliana HOM05D006224 ORTHO05D007691 1.5e-119 433.7 318 64.8
BolC9t58538H Brassica oleracea HOM05D006224 ORTHO05D007691 9.4e-119 431.0 361 58.7
Ciclev10008605m.g Citrus clementina HOM05D006224 ORTHO05D007691 9.4e-119 431.0 369 58.0
CDE04G0176 Ceratophyllum demersum HOM05D006224 ORTHO05D007691 3.6e-118 429.1 319 62.4
Peaxi162Scf00560g00629 Petunia axillaris HOM05D006224 ORTHO05D007691 4.0e-117 425.6 354 62.7
ClCG00G002580 Citrullus lanatus HOM05D006224 ORTHO05D007691 2.0e-116 423.3 299 65.9
HPP92_009101 Vanilla planifolia HOM05D006224 ORTHO05D007691 5.7e-116 421.8 326 59.2
AL6G30950 Arabidopsis lyrata HOM05D006224 ORTHO05D007691 7.5e-116 421.4 387 56.1
Sc08g0007140 Simmondsia chinensis HOM05D006224 ORTHO05D007691 7.5e-116 421.4 340 59.7
Carub.0006s1780 Capsella rubella HOM05D006224 ORTHO05D007691 2.2e-115 419.9 322 63.0
Psat1g037920 Pisum sativum HOM05D006224 ORTHO05D007691 4.8e-115 418.7 294 67.7
EL10Ac8g18541 Beta vulgaris HOM05D006224 ORTHO05D007691 6.3e-115 418.3 354 57.1
Sp6g24950 Schrenkiella parvula HOM05D006224 ORTHO05D007691 1.1e-114 417.5 362 59.4
Oeu060631.1 Olea europaea HOM05D006224 ORTHO05D007691 1.8e-114 416.8 342 61.4
FAN28G2414 Fragaria x ananassa HOM05D006224 ORTHO05D007691 4.1e-114 415.6 305 65.2
AL6G30960 Arabidopsis lyrata HOM05D006224 ORTHO05D007691 2.0e-113 413.3 316 62.0
Ca_25513_v3 Cicer arietinum L. HOM05D006224 ORTHO05D007691 5.9e-113 411.8 278 69.4
CAN.G929.19 Capsicum annuum HOM05D006224 ORTHO05D007691 2.5e-111 406.4 272 69.5
Aqoxy5G03790 Aquilegia oxysepala HOM05D006224 ORTHO05D007691 4.2e-111 405.6 329 58.7
AT5G19470 Arabidopsis thaliana HOM05D006224 ORTHO05D007691 9.5e-111 404.4 374 55.1
THA.LOC104799742 Tarenaya hassleriana HOM05D006224 ORTHO05D007691 1.2e-110 404.1 279 66.7
SGA_v2.0_scaffold23G10152 Striga asiatica HOM05D006224 ORTHO05D007691 3.6e-110 402.5 363 57.9
A10p20240 Brassica napus HOM05D006224 ORTHO05D007691 1.0e-109 401.0 356 58.1
FAN26G3318 Fragaria x ananassa HOM05D006224 ORTHO05D007691 1.4e-106 390.6 344 58.1
C09p56840 Brassica napus HOM05D006224 ORTHO05D007691 7.0e-106 388.3 361 54.8
Sabra06G0124600 Salix brachista HOM05D006224 ORTHO05D007691 2.7e-105 386.3 355 56.9
TPR.G31453 Trifolium pratense HOM05D006224 ORTHO05D007691 2.9e-104 382.9 340 57.9
Nn8g39262 Nelumbo nucifera HOM05D006224 ORTHO05D007691 2.3e-101 373.2 360 53.6
TPR.G31456 Trifolium pratense HOM05D006224 ORTHO05D007691 7.5e-100 368.2 316 58.5
BraA10t44095Z Brassica rapa HOM05D006224 ORTHO05D007691 3.0e-96 356.3 330 56.1
Pp3c12_9090 Physcomitrium patens HOM05D006224 ORTHO05D007691 3.6e-94 349.4 298 55.0
Mapoly0084s0007 Marchantia polymorpha HOM05D006224 ORTHO05D007691 6.8e-93 345.1 304 53.3
Lj7A644T17 Lonicera japonica HOM05D006224 ORTHO05D007691 8.9e-93 344.7 373 50.9
Peaxi162Scf00560g00615 Petunia axillaris HOM05D006224 ORTHO05D007691 1.3e-91 340.9 282 60.3
Potri.006G157800 Populus trichocarpa HOM05D006224 ORTHO05D007691 4.9e-91 339.0 366 50.8
SMO347G0504 Selaginella moellendorffii HOM05D006224 ORTHO05D007691 2.1e-86 323.6 290 53.1
Cre13.g582201 Chlamydomonas reinhardtii HOM05D006224 ORTHO05D007691 7.6e-76 288.5 297 49.5
Prupe.7G186600 Prunus persica HOM05D006224 ORTHO05D007691 8.4e-75 285.0 234 59.4
unitig_748.g7154 Utricularia gibba HOM05D006224 ORTHO05D007691 2.0e-68 263.8 213 58.7
AUR62033400 Chenopodium quinoa HOM05D006224 ORTHO05D007691 6.0e-65 252.3 239 49.8
AagrBONN_evm.TU.Sc2ySwM_228.2202 Anthoceros agrestis HOM05D006224 ORTHO05D007691 3.0e-64 250.0 213 55.4
Pp3c6_16000 Physcomitrium patens HOM05D006224 ORTHO05D007691 1.9e-63 247.3 295 41.0
Pp3c3_27400 Physcomitrium patens HOM05D006224 ORTHO05D007691 9.6e-63 245.0 296 38.9
MCO11G748 Micromonas commoda HOM05D006224 ORTHO05D007691 1.1e-61 241.5 289 45.3
PRCOL_00004258 Prasinoderma coloniale HOM05D006224 ORTHO05D007691 1.6e-54 217.6 293 40.6
CARHR193460 Cardamine hirsuta HOM05D006224 ORTHO05D007691 1.1e-47 194.9 129 70.5
Os09g0322200 Oryza sativa ssp. japonica HOM05D006224 ORTHO05D007691 1.6e-38 164.5 146 52.7
unitig_748.g7155 Utricularia gibba HOM05D006224 ORTHO05D007691 1.3e-32 144.8 85 75.3
Ah.09g227190 Amaranthus hybridus HOM05D006224 ORTHO05D007691 1.1e-31 141.7 90 72.2
Cfa025487 Carpinus fangiana HOM05D006224 ORTHO05D007691 6.9e-29 132.5 201 38.3
SEGI_32758 Sequoiadendron giganteum HOM05D006224 ORTHO05D007691 1.3e-22 111.7 69 68.1
MSTRG.26438 Avicennia marina HOM05D006224 ORTHO05D007691 2.9e-11 73.9 59 59.3
SEGI_12041 Sequoiadendron giganteum HOM05D006224 ORTHO05D007691 2.1e-09 67.8 72 48.6
vmacro11393 Vaccinium macrocarpon HOM05D003441 ORTHO05D004516 3.0e-08 63.9 42 66.7
SEGI_03040 Sequoiadendron giganteum HOM05D006224 ORTHO05D007691 3.7e-06 57.0 36 61.1


User provided reference genes

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