Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr05g0134941 Helianthus annuus HOM05D000537 ORTHO05D226137 8.0e-83 310.5 166 100.0
HanXRQChr05g0134911 Helianthus annuus HOM05D000537 ORTHO05D000415 1.1e-18 97.4 113 52.2
HanXRQChr05g0134951 Helianthus annuus HOM05D000537 ORTHO05D000415 7.9e-14 81.3 113 50.4
CSS0022930 Camellia sinensis var. sinensis HOM05D000537 ORTHO05D000415 2.0e-12 76.6 119 44.5
Dinv17011 Davidia involucrata HOM05D000537 ORTHO05D000415 1.3e-11 73.9 117 43.6
Dinv42960 Davidia involucrata HOM05D000537 ORTHO05D000415 1.3e-11 73.9 117 43.6
Dinv43139 Davidia involucrata HOM05D000537 ORTHO05D000415 1.3e-11 73.9 117 43.6
COL.COLO4_18521 Corchorus olitorius HOM05D000537 ORTHO05D000415 1.7e-11 73.6 135 40.0
Lsat_1_v5_gn_8_73981 Lactuca sativa HOM05D000537 ORTHO05D000415 1.7e-11 73.6 112 44.6
vmacro14513 Vaccinium macrocarpon HOM05D000537 ORTHO05D000415 1.1e-10 70.9 118 41.5
Actinidia34410 Actinidia chinensis HOM05D000537 ORTHO05D000415 1.8e-10 70.1 119 42.0
Glyma.08G269000 Glycine max HOM05D000537 ORTHO05D000415 2.4e-10 69.7 126 40.5
Cc03_g13660 Coffea canephora HOM05D000537 ORTHO05D000415 5.3e-10 68.6 124 39.5
VMungo1080G1193 Vigna mungo HOM05D000537 ORTHO05D000415 9.1e-10 67.8 119 38.7
Sabra10G0142100 Salix brachista HOM05D000537 ORTHO05D000415 1.2e-09 67.4 119 42.0
TAR369G0579 Trochodendron aralioides HOM05D000537 ORTHO05D000415 1.2e-09 67.4 126 38.9
Potri.010G184800 Populus trichocarpa HOM05D000537 ORTHO05D000415 2.0e-09 66.6 119 42.0
Actinidia07031 Actinidia chinensis HOM05D000537 ORTHO05D000415 2.6e-09 66.2 119 41.2
Carub.0005s1481 Capsella rubella HOM05D000537 ORTHO05D000415 2.6e-09 66.2 124 37.1
TAR623G0860 Trochodendron aralioides HOM05D000537 ORTHO05D000415 3.4e-09 65.9 126 38.1
Glyma.16G133400 Glycine max HOM05D000537 ORTHO05D000415 4.5e-09 65.5 124 38.7
ECA236G0987 Erigeron canadensis HOM05D000537 ORTHO05D000415 5.9e-09 65.1 112 41.1
Peaxi162Scf00774g00120 Petunia axillaris HOM05D000537 ORTHO05D000415 5.9e-09 65.1 120 39.2
Lj6g0001534 Lotus japonicus HOM05D000537 ORTHO05D000415 7.7e-09 64.7 106 41.5
AL5G28090 Arabidopsis lyrata HOM05D000537 ORTHO05D000415 1.3e-08 63.9 124 35.5
CANSAT54G1436 Cannabis sativa HOM05D000537 ORTHO05D000415 1.3e-08 63.9 120 38.3
AT3G48670 Arabidopsis thaliana HOM05D000537 ORTHO05D000415 1.7e-08 63.5 124 35.5
MELO3C020627.2 Cucumis melo HOM05D000537 ORTHO05D000415 2.2e-08 63.2 119 38.7
QL01p031634 Quercus lobata HOM05D000537 ORTHO05D000415 2.2e-08 63.2 120 39.2
Lj1C151T9 Lonicera japonica HOM05D000537 ORTHO05D000415 2.9e-08 62.8 118 42.4
Lj2A1063T75 Lonicera japonica HOM05D000537 ORTHO05D000415 2.9e-08 62.8 144 34.7
SGA_v2.0_scaffold203G41517 Striga asiatica HOM05D000537 ORTHO05D000415 2.9e-08 62.8 124 38.7
Gohir.A05G349100 Gossypium hirsutum HOM05D000537 ORTHO05D000415 3.8e-08 62.4 126 35.7
Gorai.012G071000 Gossypium raimondii HOM05D000537 ORTHO05D000415 3.8e-08 62.4 126 35.7
Lj6g0012433 Lotus japonicus HOM05D000537 ORTHO05D000415 3.8e-08 62.4 126 37.3
Prupe.2G236900 Prunus persica HOM05D000537 ORTHO05D000415 3.8e-08 62.4 126 37.3
Rhsim01G0228300 Rhododendron simsii HOM05D000537 ORTHO05D000415 3.8e-08 62.4 134 36.6
Cpa.g.sc81.135 Carica papaya HOM05D000537 ORTHO05D000415 6.5e-08 61.6 117 37.6
FAN25G3553 Fragaria x ananassa HOM05D000537 ORTHO05D000415 6.5e-08 61.6 115 40.0
CAN.G394.60 Capsicum annuum HOM05D000537 ORTHO05D000415 8.5e-08 61.2 125 36.8
Glyma.18G038300 Glycine max HOM05D000537 ORTHO05D000415 8.5e-08 61.2 124 37.9
SGA_v2.0_scaffold221G42664 Striga asiatica HOM05D000537 ORTHO05D000415 8.5e-08 61.2 126 39.7
Aa31LG4G17240 Aethionema arabicum HOM05D000537 ORTHO05D000415 1.1e-07 60.8 124 37.1
Duzib114G0977 Durio zibethinus HOM05D000537 ORTHO05D000415 1.1e-07 60.8 124 34.7
HanXRQChr06g0178711 Helianthus annuus HOM05D000537 ORTHO05D000415 1.1e-07 60.8 113 42.5
arahy.Tifrunner.gnm1.ann1.J5AP2X Arachis hypogaea HOM05D000537 ORTHO05D000415 1.4e-07 60.5 126 34.1
arahy.Tifrunner.gnm1.ann1.PPMM0K Arachis hypogaea HOM05D000537 ORTHO05D000415 1.4e-07 60.5 126 34.1
Glyma.11G219200 Glycine max HOM05D000537 ORTHO05D000415 1.4e-07 60.5 124 37.9
Lalb_Chr18g0053251 Lupinus albus HOM05D000537 ORTHO05D000415 1.4e-07 60.5 126 35.7
Oeu021605.1 Olea europaea HOM05D000537 ORTHO05D000415 1.4e-07 60.5 119 39.5
Phvul.001G232400 Phaseolus vulgaris HOM05D000537 ORTHO05D000415 1.4e-07 60.5 135 37.0
SHI22757 Sapria himalayana HOM05D000537 ORTHO05D000415 1.4e-07 60.5 124 37.1
MSTRG.17830 Avicennia marina HOM05D000537 ORTHO05D000415 1.9e-07 60.1 119 38.7
CSS0045683 Camellia sinensis var. sinensis HOM05D000537 ORTHO05D000415 1.9e-07 60.1 126 34.9
COL.COLO4_15061 Corchorus olitorius HOM05D000537 ORTHO05D000415 1.9e-07 60.1 126 34.9
Dinv02218 Davidia involucrata HOM05D000537 ORTHO05D000415 1.9e-07 60.1 117 41.0
Dinv02219 Davidia involucrata HOM05D000537 ORTHO05D000415 1.9e-07 60.1 117 41.0
Lj1C939T2 Lonicera japonica HOM05D000537 ORTHO05D000415 1.9e-07 60.1 126 33.3
Thecc.10G040300 Theobroma cacao HOM05D000537 ORTHO05D000415 1.9e-07 60.1 124 35.5
TPR.G3474 Trifolium pratense HOM05D000537 ORTHO05D000415 1.9e-07 60.1 113 38.9
Atru.chr3.3928 Acer truncatum HOM05D000537 ORTHO05D000415 2.5e-07 59.7 126 35.7
Ca_05889_v3 Cicer arietinum L. HOM05D000537 ORTHO05D000415 2.5e-07 59.7 126 37.3
PGR102G0388 Punica granatum HOM05D000537 ORTHO05D000415 2.5e-07 59.7 119 41.2
Sed0022378 Sechium edule HOM05D000537 ORTHO05D000415 2.5e-07 59.7 126 36.5
Eucgr.G02937 Eucalyptus grandis HOM05D000537 ORTHO05D000415 3.2e-07 59.3 126 36.5
Psat2g185120 Pisum sativum HOM05D000537 ORTHO05D000415 3.2e-07 59.3 130 35.4
Lalb_Chr20g0116931 Lupinus albus HOM05D000537 ORTHO05D000415 4.2e-07 58.9 126 35.7
MBI05_g28389_MAGBIO Magnolia biondii HOM05D000537 ORTHO05D000415 4.2e-07 58.9 118 40.7
Manes.02G132200 Manihot esculenta HOM05D000537 ORTHO05D000415 4.2e-07 58.9 120 36.7
Psat2g040760 Pisum sativum HOM05D000537 ORTHO05D000415 4.2e-07 58.9 113 37.2
GSVIVG01016528001 Vitis vinifera HOM05D000537 ORTHO05D000415 4.2e-07 58.9 126 35.7
QL08p059601 Quercus lobata HOM05D000537 ORTHO05D000415 5.5e-07 58.5 126 36.5
Solyc06g076210.3 Solanum lycopersicum HOM05D000537 ORTHO05D000415 5.5e-07 58.5 125 36.0
Sopen06g032600 Solanum pennellii HOM05D000537 ORTHO05D000415 5.5e-07 58.5 125 36.0
Sopen06g032640 Solanum pennellii HOM05D000537 ORTHO05D000415 5.5e-07 58.5 125 36.0
PGSC0003DMG400030322 Solanum tuberosum HOM05D000537 ORTHO05D000415 5.5e-07 58.5 125 36.0
Haze_24107 Corylus avellana HOM05D000537 ORTHO05D000415 7.2e-07 58.2 121 38.8
MELO3C023862.2 Cucumis melo HOM05D000537 ORTHO05D000415 7.2e-07 58.2 126 35.7
CsaV3_5G008130 Cucumis sativus L. HOM05D000537 ORTHO05D000415 7.2e-07 58.2 126 35.7
Gorai.013G263400 Gossypium raimondii HOM05D000537 ORTHO05D000415 7.2e-07 58.2 119 37.0
Lsat_1_v5_gn_8_15381 Lactuca sativa HOM05D000537 ORTHO05D000415 7.2e-07 58.2 126 34.1
Lj3g0006322 Lotus japonicus HOM05D000537 ORTHO05D000415 7.2e-07 58.2 106 39.6
Sopen06g032620 Solanum pennellii HOM05D000537 ORTHO05D000415 7.2e-07 58.2 125 36.0
TPR.G15839 Trifolium pratense HOM05D000537 ORTHO05D000415 7.2e-07 58.2 126 35.7
TPR.G5014 Trifolium pratense HOM05D000537 ORTHO05D000415 7.2e-07 58.2 126 35.7
Sc10g0008240 Simmondsia chinensis HOM05D000537 ORTHO05D000415 9.4e-07 57.8 126 35.7
TWI63G1559 Tripterygium wilfordii HOM05D000537 ORTHO05D000415 9.4e-07 57.8 125 34.4
Potri.010G202700 Populus trichocarpa HOM05D000537 ORTHO05D000415 1.6e-06 57.0 126 34.1
QL08p019521 Quercus lobata HOM05D000537 ORTHO05D000415 1.6e-06 57.0 128 36.7
ClCG07G003400 Citrullus lanatus HOM05D000537 ORTHO05D000415 2.1e-06 56.6 126 34.9
Gohir.A13G227232 Gossypium hirsutum HOM05D000537 ORTHO05D000415 2.1e-06 56.6 119 37.0
HanXRQChr02g0049151 Helianthus annuus HOM05D000537 ORTHO05D000415 2.1e-06 56.6 126 34.9
Aqoxy2G02159 Aquilegia oxysepala HOM05D000537 ORTHO05D000415 2.7e-06 56.2 126 36.5
CANSAT56G1542 Cannabis sativa HOM05D000537 ORTHO05D000415 2.7e-06 56.2 126 35.7
Haze_17080 Corylus avellana HOM05D000537 ORTHO05D000415 2.7e-06 56.2 126 33.3
Solyc06g076200.2 Solanum lycopersicum HOM05D000537 ORTHO05D000415 2.7e-06 56.2 119 35.3
Actinidia07738 Actinidia chinensis HOM05D000537 ORTHO05D000415 3.6e-06 55.8 126 32.5
MSTRG.283 Avicennia marina HOM05D000537 ORTHO05D000415 3.6e-06 55.8 126 33.3
Cfa011512 Carpinus fangiana HOM05D000537 ORTHO05D000415 3.6e-06 55.8 120 37.5
Sabra15G0062600 Salix brachista HOM05D000537 ORTHO05D000415 4.7e-06 55.5 119 35.3
Cfa001460 Carpinus fangiana HOM05D000537 ORTHO05D000415 6.1e-06 55.1 126 32.5
Ciclev10000571m.g Citrus clementina HOM05D000537 ORTHO05D000415 6.1e-06 55.1 126 34.1
Duzib150G0788 Durio zibethinus HOM05D000537 ORTHO05D000415 6.1e-06 55.1 119 36.1
Migut.E00827 Erythranthe guttata HOM05D000537 ORTHO05D000415 6.1e-06 55.1 126 32.5
Gohir.D13G232600 Gossypium hirsutum HOM05D000537 ORTHO05D000415 6.1e-06 55.1 119 36.1
Lalb_Chr17g0346241 Lupinus albus HOM05D000537 ORTHO05D000415 6.1e-06 55.1 126 35.7
GSVIVG01010892001 Vitis vinifera HOM05D000537 ORTHO05D000415 6.1e-06 55.1 126 34.1
GSVIVG01024947001 Vitis vinifera HOM05D000537 ORTHO05D000415 6.1e-06 55.1 117 35.0
Atru.chr3.3935 Acer truncatum HOM05D000537 ORTHO05D000415 7.9e-06 54.7 102 41.2
Cpa.g.sc1.418 Carica papaya HOM05D000537 ORTHO05D000415 7.9e-06 54.7 126 34.9
Sed0028116 Sechium edule HOM05D000537 ORTHO05D000415 7.9e-06 54.7 126 33.3
Hund13771 Selenicereus undatus HOM05D000537 ORTHO05D000415 7.9e-06 54.7 126 36.5


User provided reference genes

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