Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr05g0130941 Helianthus annuus HOM05D003498 ORTHO05D004191 2.0e-36 155.2 76 100.0
HanXRQChr10g0305081 Helianthus annuus HOM05D003498 ORTHO05D004191 1.5e-31 139.0 71 95.8
Lsat_1_v5_gn_2_32401 Lactuca sativa HOM05D003498 ORTHO05D004191 8.4e-11 70.1 39 82.1
Lsat_1_v5_gn_2_93800 Lactuca sativa HOM05D003498 ORTHO05D004191 8.4e-11 70.1 39 82.1
HanXRQChr14g0450941 Helianthus annuus HOM05D003498 ORTHO05D004191 1.9e-10 68.9 39 79.5
HanXRQChr05g0138221 Helianthus annuus HOM05D003498 ORTHO05D004191 9.2e-10 66.6 39 76.9
HanXRQChr05g0142761 Helianthus annuus HOM05D003498 ORTHO05D004191 9.2e-10 66.6 39 76.9
TWI36G0082 Tripterygium wilfordii HOM05D003498 ORTHO05D004191 9.2e-10 66.6 39 79.5
Ah.01g001720 Amaranthus hybridus HOM05D003498 ORTHO05D004191 1.2e-09 66.2 36 83.3
AUR62017642 Chenopodium quinoa HOM05D003498 ORTHO05D004191 1.6e-09 65.9 39 76.9
Dinv33373 Davidia involucrata HOM05D003498 ORTHO05D004191 1.6e-09 65.9 39 76.9
AUR62042316 Chenopodium quinoa HOM05D003498 ORTHO05D004191 2.1e-09 65.5 36 80.6
CsaV3_4G001780 Cucumis sativus L. HOM05D003498 ORTHO05D004191 2.1e-09 65.5 57 59.6
ECA238G3044 Erigeron canadensis HOM05D003498 ORTHO05D004191 2.1e-09 65.5 39 76.9
PGR083G2492 Punica granatum HOM05D003498 ORTHO05D004191 2.1e-09 65.5 39 76.9
ClCG07G012360 Citrullus lanatus HOM05D003498 ORTHO05D004191 2.7e-09 65.1 39 76.9
MD09G1015900 Malus domestica HOM05D003498 ORTHO05D004191 2.7e-09 65.1 39 76.9
AL8G35910 Arabidopsis lyrata HOM05D003498 ORTHO05D004191 3.5e-09 64.7 39 74.4
AT5G59440 Arabidopsis thaliana HOM05D003498 ORTHO05D004191 3.5e-09 64.7 39 74.4
Carub.0008s2011 Capsella rubella HOM05D003498 ORTHO05D004191 3.5e-09 64.7 39 74.4
Cfa012954 Carpinus fangiana HOM05D002694 ORTHO05D002927 3.5e-09 64.7 39 76.9
AUR62003275 Chenopodium quinoa HOM05D003498 ORTHO05D004191 3.5e-09 64.7 39 74.4
AUR62007665 Chenopodium quinoa HOM05D003498 ORTHO05D004191 3.5e-09 64.7 36 80.6
AUR62012113 Chenopodium quinoa HOM05D003498 ORTHO05D004191 3.5e-09 64.7 39 74.4
AUR62012870 Chenopodium quinoa HOM05D003498 ORTHO05D004191 3.5e-09 64.7 39 74.4
MELO3C017855.2 Cucumis melo HOM05D003498 ORTHO05D004191 3.5e-09 64.7 39 74.4
Thhalv10014606m.g Eutrema salsugineum HOM05D003498 ORTHO05D004191 3.5e-09 64.7 39 74.4
FAN05G5642 Fragaria x ananassa HOM05D003498 ORTHO05D004191 3.5e-09 64.7 36 83.3
Prupe.3G071800 Prunus persica HOM05D003498 ORTHO05D004191 3.5e-09 64.7 39 76.9
Prupe.3G301400 Prunus persica HOM05D003498 ORTHO05D004191 3.5e-09 64.7 39 76.9
QL02p008668 Quercus lobata HOM05D003498 ORTHO05D004191 3.5e-09 64.7 39 76.9
Sp6g21120 Schrenkiella parvula HOM05D003498 ORTHO05D004191 3.5e-09 64.7 39 74.4
Actinidia05930 Actinidia chinensis HOM05D003498 ORTHO05D004191 4.6e-09 64.3 39 74.4
CARHR285810 Cardamine hirsuta HOM05D003498 ORTHO05D004191 4.6e-09 64.3 39 74.4
Cpa.g.sc802.1 Carica papaya HOM05D003498 ORTHO05D004191 4.6e-09 64.3 39 74.4
Haze_21315 Corylus avellana HOM05D003498 ORTHO05D004191 4.6e-09 64.3 39 76.9
MD17G1016300 Malus domestica HOM05D003498 ORTHO05D004191 4.6e-09 64.3 39 76.9
Aa31LG1G11800 Aethionema arabicum HOM05D003498 ORTHO05D004191 6.0e-09 63.9 39 74.4
Cc07_g00530 Coffea canephora HOM05D003498 ORTHO05D004191 6.0e-09 63.9 39 76.9
Peaxi162Scf00776g00325 Petunia axillaris HOM05D003498 ORTHO05D004191 6.0e-09 63.9 39 74.4
arahy.Tifrunner.gnm1.ann1.82NANE Arachis hypogaea HOM05D003498 ORTHO05D004191 7.8e-09 63.5 39 74.4
arahy.Tifrunner.gnm1.ann1.C6G3CE Arachis hypogaea HOM05D003498 ORTHO05D004191 7.8e-09 63.5 39 74.4
arahy.Tifrunner.gnm1.ann1.IHQ30F Arachis hypogaea HOM05D003498 ORTHO05D004191 7.8e-09 63.5 39 74.4
arahy.Tifrunner.gnm1.ann1.MGT28Z Arachis hypogaea HOM05D003498 ORTHO05D004191 7.8e-09 63.5 39 74.4
CiPaw.08G003000 Carya illinoinensis HOM05D003498 ORTHO05D004191 7.8e-09 63.5 39 74.4
AUR62025775 Chenopodium quinoa HOM05D003498 ORTHO05D018212 1.0e-08 63.2 36 77.8
AUR62033715 Chenopodium quinoa HOM05D003498 ORTHO05D004191 1.0e-08 63.2 39 71.8
Cc06_g23000 Coffea canephora HOM05D003498 ORTHO05D004191 1.0e-08 63.2 57 54.4
PSO675G6488 Papaver somniferum HOM05D003498 ORTHO05D004191 1.0e-08 63.2 36 80.6
AUR62020308 Chenopodium quinoa HOM05D003498 ORTHO05D004191 1.3e-08 62.8 36 77.8
AUR62022230 Chenopodium quinoa HOM05D003498 ORTHO05D000001 1.3e-08 62.8 35 80.0
Medtr0271s0010 Medicago truncatula HOM05D003498 ORTHO05D004191 1.3e-08 62.8 39 74.4
QL02p008646 Quercus lobata HOM05D003498 ORTHO05D004191 1.3e-08 62.8 42 71.4
QL02p026417 Quercus lobata HOM05D003498 ORTHO05D004191 1.3e-08 62.8 36 80.6
Actinidia18419 Actinidia chinensis HOM05D003498 ORTHO05D004191 1.7e-08 62.4 38 76.3
Aqoxy3G02772 Aquilegia oxysepala HOM05D003498 ORTHO05D004191 1.7e-08 62.4 39 71.8
Aqoxy7G03334 Aquilegia oxysepala HOM05D003498 ORTHO05D004191 1.7e-08 62.4 39 71.8
CiPaw.07G235500 Carya illinoinensis HOM05D003498 ORTHO05D004191 1.7e-08 62.4 39 69.2
AUR62042988 Chenopodium quinoa HOM05D003498 ORTHO05D004191 1.7e-08 62.4 39 71.8
COL.COLO4_27123 Corchorus olitorius HOM05D003498 ORTHO05D004191 1.7e-08 62.4 39 71.8
Gohir.A07G076000 Gossypium hirsutum HOM05D003498 ORTHO05D004191 1.7e-08 62.4 39 71.8
Gohir.A11G167100 Gossypium hirsutum HOM05D003498 ORTHO05D004191 1.7e-08 62.4 39 71.8
Gohir.D11G173400 Gossypium hirsutum HOM05D003498 ORTHO05D004191 1.7e-08 62.4 39 71.8
Gorai.007G185700 Gossypium raimondii HOM05D003498 ORTHO05D004191 1.7e-08 62.4 39 71.8
Nitab4.5_0000441g0220 Nicotiana tabacum HOM05D003498 ORTHO05D004191 1.7e-08 62.4 39 71.8
Nitab4.5_0005699g0040 Nicotiana tabacum HOM05D003498 ORTHO05D004191 1.7e-08 62.4 39 71.8
Phvul.005G072200 Phaseolus vulgaris HOM05D003498 ORTHO05D004191 1.7e-08 62.4 39 74.4
Rhsim08G0045600 Rhododendron simsii HOM05D003498 ORTHO05D004191 1.7e-08 62.4 39 71.8
TPR.G38988 Trifolium pratense HOM05D003498 ORTHO05D004191 1.7e-08 62.4 39 74.4
VMungo1080G1345 Vigna mungo HOM05D003498 ORTHO05D004191 1.7e-08 62.4 39 74.4
GSVIVG01001834001 Vitis vinifera HOM05D003498 ORTHO05D004191 1.7e-08 62.4 39 71.8
EL10Ac9g22898 Beta vulgaris HOM05D003498 ORTHO05D004191 2.3e-08 62.0 39 71.8
CDE09G0325 Ceratophyllum demersum HOM05D003498 ORTHO05D004191 2.3e-08 62.0 39 74.4
Ciclev10016330m.g Citrus clementina HOM05D003498 ORTHO05D004191 2.3e-08 62.0 39 71.8
PSO170G3520 Papaver somniferum HOM05D003498 ORTHO05D004191 2.3e-08 62.0 36 77.8
Rhsim10G0009900 Rhododendron simsii HOM05D003498 ORTHO05D004191 2.3e-08 62.0 39 71.8
Sed0009078 Sechium edule HOM05D003498 ORTHO05D004191 2.3e-08 62.0 39 74.4
Sc07g0003610 Simmondsia chinensis HOM05D003498 ORTHO05D004191 2.3e-08 62.0 39 69.2
Solyc07g048010.4 Solanum lycopersicum HOM05D003498 ORTHO05D004191 2.3e-08 62.0 39 71.8
Sopen07g024440 Solanum pennellii HOM05D003498 ORTHO05D004191 2.3e-08 62.0 39 71.8
PGSC0003DMG400006157 Solanum tuberosum HOM05D003498 ORTHO05D004191 2.3e-08 62.0 36 77.8
vmacro05933 Vaccinium macrocarpon HOM05D003498 ORTHO05D004191 2.3e-08 62.0 39 71.8
BcaB08g36258 Brassica carinata HOM05D003498 ORTHO05D004191 3.0e-08 61.6 39 71.8
BcaC04g19772 Brassica carinata HOM05D003498 ORTHO05D004191 3.0e-08 61.6 39 71.8
A10p16650 Brassica napus HOM05D000758 ORTHO05D004191 3.0e-08 61.6 39 71.8
C09p51820 Brassica napus HOM05D000758 ORTHO05D001216 3.0e-08 61.6 39 71.8
BolC9t58046H Brassica oleracea HOM05D000758 ORTHO05D004191 3.0e-08 61.6 39 71.8
BraA10t43747Z Brassica rapa HOM05D003498 ORTHO05D004191 3.0e-08 61.6 39 71.8
AUR62036945 Chenopodium quinoa HOM05D003498 ORTHO05D004191 3.0e-08 61.6 36 77.8
Ca_01840_v3 Cicer arietinum L. HOM05D003498 ORTHO05D004191 3.0e-08 61.6 39 71.8
Duzib138G0533 Durio zibethinus HOM05D003498 ORTHO05D004191 3.0e-08 61.6 39 69.2
FvH4_6g52930 Fragaria vesca HOM05D003498 ORTHO05D004191 3.0e-08 61.6 39 74.4
FAN02G3013 Fragaria x ananassa HOM05D003498 ORTHO05D004191 3.0e-08 61.6 39 74.4
FAN09G1233 Fragaria x ananassa HOM05D003498 ORTHO05D004191 3.0e-08 61.6 39 74.4
FAN14G2218 Fragaria x ananassa HOM05D003498 ORTHO05D004191 3.0e-08 61.6 39 74.4
Lj7A607T30 Lonicera japonica HOM05D003498 ORTHO05D004191 3.0e-08 61.6 39 71.8
Lj1g0028146 Lotus japonicus HOM05D003498 ORTHO05D004191 3.0e-08 61.6 36 77.8
Lj5g0005525 Lotus japonicus HOM05D003498 ORTHO05D004191 3.0e-08 61.6 39 71.8
Manes.14G169300 Manihot esculenta HOM05D003498 ORTHO05D004191 3.0e-08 61.6 35 77.1
Manes.14G170700 Manihot esculenta HOM05D003498 ORTHO05D004191 3.0e-08 61.6 35 77.1
Nitab4.5_0002877g0040 Nicotiana tabacum HOM05D003498 ORTHO05D004191 3.0e-08 61.6 36 77.8
PSO210G3977 Papaver somniferum HOM05D003498 ORTHO05D004191 3.0e-08 61.6 36 77.8
PSO541G3815 Papaver somniferum HOM05D003498 ORTHO05D004191 3.0e-08 61.6 36 77.8
RcHm_v2.0_Chr2g0174641 Rosa chinensis HOM05D003498 ORTHO05D004191 3.0e-08 61.6 39 74.4
TAR374G1609 Trochodendron aralioides HOM05D003498 ORTHO05D004191 3.0e-08 61.6 39 71.8
TAR622G0600 Trochodendron aralioides HOM05D003498 ORTHO05D004191 3.0e-08 61.6 39 71.8
Atru.chr10.1225 Acer truncatum HOM05D003498 ORTHO05D004191 3.9e-08 61.2 39 71.8
Glyma.13G277200 Glycine max HOM05D003498 ORTHO05D004191 3.9e-08 61.2 39 71.8
Gohir.D07G080500 Gossypium hirsutum HOM05D003498 ORTHO05D004191 3.9e-08 61.2 39 69.2
Lalb_Chr10g0095001 Lupinus albus HOM05D003498 ORTHO05D004191 3.9e-08 61.2 39 71.8
Medtr0274s0020 Medicago truncatula HOM05D003498 ORTHO05D004191 3.9e-08 61.2 39 71.8
Medtr1g092440 Medicago truncatula HOM05D000397 ORTHO05D004191 3.9e-08 61.2 39 71.8
Nn3g16542 Nelumbo nucifera HOM05D003498 ORTHO05D004191 3.9e-08 61.2 39 71.8
Oeu001847.2 Olea europaea HOM05D003498 ORTHO05D004191 3.9e-08 61.2 39 71.8
Psat5g244520 Pisum sativum HOM05D003498 ORTHO05D004191 3.9e-08 61.2 39 71.8
Hund09045 Selenicereus undatus HOM05D003498 ORTHO05D004191 3.9e-08 61.2 39 71.8
Actinidia38210 Actinidia chinensis HOM05D003498 ORTHO05D004191 5.1e-08 60.8 41 65.9
MSTRG.15556 Avicennia marina HOM05D003498 ORTHO05D004191 5.1e-08 60.8 39 71.8
CSS0002226 Camellia sinensis var. sinensis HOM05D003498 ORTHO05D004191 5.1e-08 60.8 39 69.2
CSS0006967 Camellia sinensis var. sinensis HOM05D003498 ORTHO05D004191 5.1e-08 60.8 39 69.2
CSS0027983 Camellia sinensis var. sinensis HOM05D003498 ORTHO05D004191 5.1e-08 60.8 39 69.2
CSS0030890 Camellia sinensis var. sinensis HOM05D003498 ORTHO05D004191 5.1e-08 60.8 39 69.2
CSS0032491 Camellia sinensis var. sinensis HOM05D003498 ORTHO05D004191 5.1e-08 60.8 39 69.2
CAN.G1461.1 Capsicum annuum HOM05D003498 ORTHO05D004191 5.1e-08 60.8 39 69.2
DCAR_027394 Daucus carota HOM05D003498 ORTHO05D004191 5.1e-08 60.8 39 69.2
Os07g0639900 Oryza sativa ssp. japonica HOM05D003498 ORTHO05D004191 5.1e-08 60.8 44 63.6
SGA_v2.0_scaffold47G17560 Striga asiatica HOM05D003498 ORTHO05D004191 5.1e-08 60.8 39 71.8
THA.LOC104810770 Tarenaya hassleriana HOM05D003498 ORTHO05D004191 5.1e-08 60.8 39 71.8
Hma1.2p1_0279F.1_g112380 Hydrangea macrophylla HOM05D003498 ORTHO05D004191 6.6e-08 60.5 39 69.2
Nitab4.5_0011275g0010 Nicotiana tabacum HOM05D003498 ORTHO05D004191 6.6e-08 60.5 36 75.0
CANSAT56G0570 Cannabis sativa HOM05D003498 ORTHO05D004191 8.7e-08 60.1 39 71.8
ATR1120G052 Amborella trichopoda HOM05D003498 ORTHO05D004191 1.1e-07 59.7 39 71.8
Migut.K01441 Erythranthe guttata HOM05D003498 ORTHO05D004191 1.1e-07 59.7 39 69.2
Oeu001405.1 Olea europaea HOM05D003498 ORTHO05D004191 1.1e-07 59.7 39 69.2
Zm00001eb109870 Zea mays HOM05D003498 ORTHO05D004191 1.1e-07 59.7 44 65.9
Eucgr.A01374 Eucalyptus grandis HOM05D003498 ORTHO05D004191 1.5e-07 59.3 43 65.1
Sabra16G0216000 Salix brachista HOM05D003498 ORTHO05D004191 1.5e-07 59.3 39 69.2
Duzib133G0132 Durio zibethinus HOM05D003498 ORTHO05D004191 1.9e-07 58.9 36 75.0
MBI11_g00914_MAGBIO Magnolia biondii HOM05D003498 ORTHO05D004191 1.9e-07 58.9 39 69.2
Potri.001G334900 Populus trichocarpa HOM05D003498 ORTHO05D004191 1.9e-07 58.9 39 69.2
PGR083G1382 Punica granatum HOM05D003498 ORTHO05D004191 1.9e-07 58.9 36 72.2
Thecc.04G123800 Theobroma cacao HOM05D003498 ORTHO05D004191 1.9e-07 58.9 39 69.2
unitig_748.g7053 Utricularia gibba HOM05D003498 ORTHO05D004191 1.9e-07 58.9 39 69.2
Atru.chr6.2501 Acer truncatum HOM05D003498 ORTHO05D004191 2.5e-07 58.5 39 69.2
Gorai.001G085600 Gossypium raimondii HOM05D003498 ORTHO05D004191 2.5e-07 58.5 39 66.7
HanXRQChr14g0428161 Helianthus annuus HOM05D003498 ORTHO05D004191 2.5e-07 58.5 37 73.0
Peaxi162Scf00147g01820 Petunia axillaris HOM05D003498 ORTHO05D004191 2.5e-07 58.5 36 75.0
vmacro18322 Vaccinium macrocarpon HOM05D003498 ORTHO05D004191 2.5e-07 58.5 47 63.8
CBR_g30299 Chara braunii HOM05D003498 ORTHO05D004191 3.3e-07 58.2 36 75.0
CSS0025632 Camellia sinensis var. sinensis HOM05D003498 ORTHO05D004191 4.3e-07 57.8 45 57.8
Aqoxy51s003 Aquilegia oxysepala HOM05D003498 ORTHO05D004191 5.6e-07 57.4 32 78.1
SGA_v2.0_scaffold68G22828 Striga asiatica HOM05D003498 ORTHO05D004191 5.6e-07 57.4 32 81.2
CBR_g50851 Chara braunii HOM05D003498 ORTHO05D004191 9.6e-07 56.6 36 72.2
Mapoly0001s0438 Marchantia polymorpha HOM05D003498 ORTHO05D004191 3.6e-06 54.7 39 61.5
HPP92_003500 Vanilla planifolia HOM05D003498 ORTHO05D004191 4.7e-06 54.3 39 61.5
HPP92_026896 Vanilla planifolia HOM05D003498 ORTHO05D004191 4.7e-06 54.3 39 61.5
SEGI_21909 Sequoiadendron giganteum HOM05D003498 ORTHO05D004191 8.1e-06 53.5 39 61.5


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