Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr05g0129731 Helianthus annuus HOM05D006175 ORTHO05D008081 5.7e-197 690.6 333 100.0
HanXRQChr11g0338981 Helianthus annuus HOM05D006175 ORTHO05D008081 6.4e-172 607.4 302 97.7
Lsat_1_v5_gn_2_15241 Lactuca sativa HOM05D006175 ORTHO05D008081 7.1e-155 550.8 310 83.9
ECA238G0751 Erigeron canadensis HOM05D006175 ORTHO05D008081 9.0e-150 533.9 317 82.0
PGSC0003DMG400031043 Solanum tuberosum HOM05D006175 ORTHO05D008081 3.2e-147 525.4 316 76.9
Cc04_g09090 Coffea canephora HOM05D006175 ORTHO05D008081 4.2e-147 525.0 316 78.8
Sopen03g028960 Solanum pennellii HOM05D006175 ORTHO05D008081 1.2e-146 523.5 316 76.6
Solyc03g098250.4 Solanum lycopersicum HOM05D006175 ORTHO05D008081 3.5e-146 521.9 316 76.3
TWI60G0630 Tripterygium wilfordii HOM05D006175 ORTHO05D008081 4.6e-146 521.5 316 78.5
CiPaw.15G150200 Carya illinoinensis HOM05D006175 ORTHO05D008081 9.6e-144 513.8 316 76.3
Migut.O00238 Erythranthe guttata HOM05D006175 ORTHO05D008081 2.1e-143 512.7 316 75.0
ClCG04G012690 Citrullus lanatus HOM05D006175 ORTHO05D008081 2.8e-143 512.3 316 75.9
GSVIVG01008158001 Vitis vinifera HOM05D006175 ORTHO05D008081 2.8e-143 512.3 316 75.9
Sed0010232 Sechium edule HOM05D006175 ORTHO05D008081 6.2e-143 511.1 316 75.6
Cfa020669 Carpinus fangiana HOM05D006175 ORTHO05D008081 8.1e-143 510.8 316 75.6
Oeu019145.1 Olea europaea HOM05D006175 ORTHO05D008081 1.1e-142 510.4 316 75.3
Potri.012G039300 Populus trichocarpa HOM05D006175 ORTHO05D008081 1.1e-142 510.4 316 75.9
QL10p033089 Quercus lobata HOM05D006175 ORTHO05D008081 1.4e-142 510.0 327 75.2
MELO3C001937.2 Cucumis melo HOM05D006175 ORTHO05D008081 1.2e-141 506.9 316 74.7
CAN.G637.8 Capsicum annuum HOM05D006175 ORTHO05D008081 2.9e-140 502.3 317 74.4
Ciclev10019690m.g Citrus clementina HOM05D006175 ORTHO05D008081 2.9e-140 502.3 316 75.6
CANSAT01G2997 Cannabis sativa HOM05D006175 ORTHO05D008081 4.9e-140 501.5 316 75.3
CsaV3_1G032270 Cucumis sativus L. HOM05D006175 ORTHO05D008081 6.4e-140 501.1 316 74.4
Zm00001eb037700 Zea mays HOM05D006175 ORTHO05D008081 6.4e-140 501.1 317 73.8
Eucgr.H00594 Eucalyptus grandis HOM05D006175 ORTHO05D008081 3.2e-139 498.8 316 73.4
DCAR_023267 Daucus carota HOM05D006175 ORTHO05D008081 7.1e-139 497.7 347 69.2
Thecc.03G068300 Theobroma cacao HOM05D006175 ORTHO05D008081 9.3e-139 497.3 310 74.8
VMungo0464G1920 Vigna mungo HOM05D006175 ORTHO05D008081 1.6e-138 496.5 315 74.0
Gohir.D05G004300 Gossypium hirsutum HOM05D006175 ORTHO05D008081 2.1e-138 496.1 316 73.4
Glyma.16G218700 Glycine max HOM05D006175 ORTHO05D008081 2.7e-138 495.7 316 73.7
Os05g0160800 Oryza sativa ssp. japonica HOM05D006175 ORTHO05D008081 3.5e-138 495.4 317 72.6
Gohir.A05G003900 Gossypium hirsutum HOM05D006175 ORTHO05D008081 4.6e-138 495.0 316 73.1
Lj2g0014656 Lotus japonicus HOM05D006175 ORTHO05D008081 4.6e-138 495.0 320 73.4
Peaxi162Scf00171g00431 Petunia axillaris HOM05D006175 ORTHO05D008081 6.0e-138 494.6 321 73.2
Phvul.004G144700 Phaseolus vulgaris HOM05D006175 ORTHO05D008081 1.3e-137 493.4 316 73.7
PGR083G2599 Punica granatum HOM05D006175 ORTHO05D008081 1.3e-137 493.4 316 73.4
Dinv02367 Davidia involucrata HOM05D006175 ORTHO05D008081 1.8e-137 493.0 310 76.1
Atru.chr3.1303 Acer truncatum HOM05D006175 ORTHO05D008081 2.3e-137 492.7 316 74.1
Gorai.009G004100 Gossypium raimondii HOM05D006175 ORTHO05D008081 5.1e-137 491.5 317 73.2
Duzib168G0906 Durio zibethinus HOM05D006175 ORTHO05D008081 3.3e-136 488.8 345 68.1
Cpa.g.sc103.12 Carica papaya HOM05D006175 ORTHO05D008081 9.6e-136 487.3 310 74.5
Aqoxy2G03817 Aquilegia oxysepala HOM05D006175 ORTHO05D008081 1.6e-135 486.5 315 73.3
FvH4_5g17980 Fragaria vesca HOM05D006175 ORTHO05D008081 1.6e-135 486.5 317 73.5
arahy.Tifrunner.gnm1.ann1.R57YID Arachis hypogaea HOM05D006175 ORTHO05D008081 6.2e-135 484.6 317 73.2
RcHm_v2.0_Chr7g0177621 Rosa chinensis HOM05D006175 ORTHO05D008081 3.1e-134 482.3 317 72.9
Haze_18963 Corylus avellana HOM05D006175 ORTHO05D008081 4.0e-134 481.9 365 65.2
Aa31LG1G13320 Aethionema arabicum HOM05D006175 ORTHO05D008081 1.2e-133 480.3 316 72.2
SalBow5G1258 Salvia bowleyana HOM05D006175 ORTHO05D008081 2.0e-133 479.6 315 71.4
vmacro03513 Vaccinium macrocarpon HOM05D006175 ORTHO05D008081 2.0e-133 479.6 353 67.7
AT5G22110 Arabidopsis thaliana HOM05D006175 ORTHO05D008081 2.6e-133 479.2 316 72.2
arahy.Tifrunner.gnm1.ann1.SV5NHS Arachis hypogaea HOM05D006175 ORTHO05D008081 1.3e-132 476.9 326 71.2
Sabra12G0027800 Salix brachista HOM05D006175 ORTHO05D008081 2.2e-132 476.1 292 77.1
SHI32102 Sapria himalayana HOM05D006175 ORTHO05D008081 3.8e-132 475.3 310 73.5
SGA_v2.0_scaffold90G27775 Striga asiatica HOM05D006175 ORTHO05D008081 4.9e-132 474.9 316 70.6
AL6G33090 Arabidopsis lyrata HOM05D006175 ORTHO05D008081 8.4e-132 474.2 316 71.5
Carub.0006s1975 Capsella rubella HOM05D006175 ORTHO05D008081 1.1e-131 473.8 316 71.2
THA.LOC104810934 Tarenaya hassleriana HOM05D006175 ORTHO05D008081 9.3e-131 470.7 316 69.9
EL10Ac3g05085 Beta vulgaris HOM05D006175 ORTHO05D008081 1.2e-130 470.3 316 68.7
PSO782G5703 Papaver somniferum HOM05D006175 ORTHO05D008081 7.9e-130 467.6 316 70.9
SpUn0288_0010 Schrenkiella parvula HOM05D006175 ORTHO05D008081 7.9e-130 467.6 316 70.6
Sc10g0008900 Simmondsia chinensis HOM05D006175 ORTHO05D008081 7.9e-130 467.6 316 69.9
PSO063G7422 Papaver somniferum HOM05D006175 ORTHO05D008081 1.0e-129 467.2 316 70.9
SEGI_25528 Sequoiadendron giganteum HOM05D006175 ORTHO05D008081 1.0e-129 467.2 316 67.7
Lj5A165T85 Lonicera japonica HOM05D006175 ORTHO05D008081 2.3e-129 466.1 316 71.8
Thhalv10001961m.g Eutrema salsugineum HOM05D006175 ORTHO05D008081 1.1e-128 463.8 316 70.3
Lalb_Chr22g0353691 Lupinus albus HOM05D006175 ORTHO05D008081 1.1e-128 463.8 300 73.0
Ah.04g156800 Amaranthus hybridus HOM05D006175 ORTHO05D008081 1.9e-128 463.0 316 67.7
TPR.G28014 Trifolium pratense HOM05D006175 ORTHO05D008081 2.5e-128 462.6 333 66.4
BcaC01g04929 Brassica carinata HOM05D006175 ORTHO05D008081 2.1e-127 459.5 321 70.4
BolC3t15542H Brassica oleracea HOM05D006175 ORTHO05D008081 2.1e-127 459.5 321 70.4
COL.COLO4_27108 Corchorus olitorius HOM05D006175 ORTHO05D008081 2.1e-127 459.5 293 73.4
C03p31990 Brassica napus HOM05D006175 ORTHO05D008081 2.8e-127 459.1 316 70.6
BcaB01g03058 Brassica carinata HOM05D006175 ORTHO05D008081 1.1e-126 457.2 316 70.9
A03p26700 Brassica napus HOM05D006175 ORTHO05D008081 9.0e-126 454.1 316 69.9
Prupe.8G055400 Prunus persica HOM05D006175 ORTHO05D008081 1.2e-125 453.8 316 69.6
Medtr6g075170 Medicago truncatula HOM05D006175 ORTHO05D008081 3.4e-125 452.2 317 69.4
AUR62002056 Chenopodium quinoa HOM05D006175 ORTHO05D008081 1.0e-124 450.7 350 62.6
BraA03t11882Z Brassica rapa HOM05D006175 ORTHO05D008081 1.7e-124 449.9 322 69.6
MD06G1235400 Malus domestica HOM05D006175 ORTHO05D008081 2.2e-124 449.5 316 68.0
AUR62028170 Chenopodium quinoa HOM05D006175 ORTHO05D008081 1.3e-119 433.7 296 68.6
Rhsim06G0000100 Rhododendron simsii HOM05D006175 ORTHO05D008081 2.8e-119 432.6 301 67.8
ATR0598G269 Amborella trichopoda HOM05D006175 ORTHO05D008081 3.7e-119 432.2 302 69.2
TAR622G0246 Trochodendron aralioides HOM05D006175 ORTHO05D008081 2.4e-118 429.5 271 74.9
Manes.03G098800 Manihot esculenta HOM05D006175 ORTHO05D008081 3.1e-118 429.1 273 75.5
CSS0011699 Camellia sinensis var. sinensis HOM05D006175 ORTHO05D008081 1.2e-117 427.2 316 67.1
Nitab4.5_0005973g0040 Nicotiana tabacum HOM05D006175 ORTHO05D008081 1.9e-115 419.9 331 64.4
SMO200G0091 Selaginella moellendorffii HOM05D006175 ORTHO05D008081 4.1e-110 402.1 316 58.2
Mapoly0003s0120 Marchantia polymorpha HOM05D006175 ORTHO05D008081 9.1e-110 401.0 316 57.6
Pp3c16_3220 Physcomitrium patens HOM05D006175 ORTHO05D008081 2.6e-109 399.4 316 57.6
Hund09784 Selenicereus undatus HOM05D006175 ORTHO05D008081 6.7e-105 384.8 316 61.4
AagrBONN_evm.TU.Sc2ySwM_369.495 Anthoceros agrestis HOM05D006175 ORTHO05D008081 5.7e-104 381.7 296 58.1
SMO089G0008 Selaginella moellendorffii HOM05D006175 ORTHO05D008081 5.7e-104 381.7 305 57.7
HPP92_019162 Vanilla planifolia HOM05D006175 ORTHO05D008081 5.3e-102 375.2 236 74.6
FAN18G1603 Fragaria x ananassa HOM05D006175 ORTHO05D008081 3.2e-99 365.9 245 72.7
vmacro01251 Vaccinium macrocarpon HOM05D006175 ORTHO05D008081 6.1e-98 361.7 360 56.1
Nitab4.5_0001180g0190 Nicotiana tabacum HOM05D006175 ORTHO05D008081 7.0e-94 348.2 320 57.8
Glyma.09G169100 Glycine max HOM05D006175 ORTHO05D008081 1.9e-91 340.1 298 58.1
Prupe.5G240100 Prunus persica HOM05D006175 ORTHO05D008081 1.2e-88 330.9 316 55.7
Psat6g072600 Pisum sativum HOM05D006175 ORTHO05D008081 1.4e-78 297.4 333 50.2
unitig_0.g1094 Utricularia gibba HOM05D006175 ORTHO05D008081 1.0e-76 291.2 306 50.7
AL4G26880 Arabidopsis lyrata HOM05D006175 ORTHO05D008081 2.2e-63 246.9 312 44.6
MCO14G014 Micromonas commoda HOM05D006175 ORTHO05D008081 2.7e-61 240.0 442 30.5
MD14G1242400 Malus domestica HOM05D006175 ORTHO05D008081 3.0e-60 236.5 248 50.4
Cre10.g424200 Chlamydomonas reinhardtii HOM05D006175 ORTHO05D008081 3.6e-58 229.6 361 36.6
VMungo1215G0683 Vigna mungo HOM05D006175 ORTHO05D008081 1.4e-57 227.6 221 53.4
PRCOL_00003367 Prasinoderma coloniale HOM05D006175 ORTHO05D008081 5.4e-54 215.7 342 37.4
AUR62043421 Chenopodium quinoa HOM05D006175 ORTHO05D008081 4.0e-49 199.5 168 60.1
CDE04G1443 Ceratophyllum demersum HOM05D006175 ORTHO05D008081 2.1e-45 187.2 103 81.6
CDE04G2185 Ceratophyllum demersum HOM05D006175 ORTHO05D008081 2.2e-31 140.6 85 74.1
Thecc.04G242900 Theobroma cacao HOM05D006175 ORTHO05D008081 1.2e-13 81.6 47 78.7
BcaC05g28616 Brassica carinata HOM05D002760 ORTHO05D001361 3.4e-08 63.5 31 80.6
A07p06810 Brassica napus HOM05D002760 ORTHO05D003169 3.4e-08 63.5 31 80.6
BNapus_Darmor_BZH_scaffold_38p01460 Brassica napus HOM05D002760 ORTHO05D003169 3.4e-08 63.5 31 80.6
BraA03t12607Z Brassica rapa HOM05D002760 ORTHO05D003169 3.4e-08 63.5 31 80.6
C05p47240 Brassica napus HOM05D002760 ORTHO05D003169 1.0e-07 62.0 31 77.4


User provided reference genes

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