Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr04g0120611 Helianthus annuus HOM05D005854 ORTHO05D007175 5.1e-205 717.6 391 100.0
Lsat_1_v5_gn_7_1520 Lactuca sativa HOM05D005854 ORTHO05D007175 1.8e-112 410.2 254 85.8
Lj9P593T21 Lonicera japonica HOM05D005854 ORTHO05D007175 2.1e-89 333.6 254 71.7
ECA236G4309 Erigeron canadensis HOM05D005854 ORTHO05D007175 2.0e-84 317.0 225 75.6
vmacro13205 Vaccinium macrocarpon HOM05D005854 ORTHO05D007175 6.7e-80 302.0 255 65.9
DCAR_020830 Daucus carota HOM05D005854 ORTHO05D007175 5.7e-79 298.9 248 66.1
Oeu063662.1 Olea europaea HOM05D005854 ORTHO05D007175 5.7e-79 298.9 254 66.9
Actinidia10096 Actinidia chinensis HOM05D005854 ORTHO05D007175 8.2e-78 295.0 254 65.0
CSS0045126 Camellia sinensis var. sinensis HOM05D005854 ORTHO05D007175 1.4e-77 294.3 261 63.2
Migut.B01823 Erythranthe guttata HOM05D005854 ORTHO05D007175 4.1e-77 292.7 255 63.9
SalBow5G1869 Salvia bowleyana HOM05D005854 ORTHO05D007175 2.6e-76 290.0 262 63.0
Hma1.2p1_0397F.1_g143770 Hydrangea macrophylla HOM05D005854 ORTHO05D007175 3.5e-76 289.7 262 64.5
CANSAT54G0206 Cannabis sativa HOM05D005854 ORTHO05D007175 4.5e-76 289.3 246 65.9
SalBow6G6433 Salvia bowleyana HOM05D005854 ORTHO05D007175 4.5e-76 289.3 254 64.2
Sopen01g039170 Solanum pennellii HOM05D005854 ORTHO05D007175 7.7e-76 288.5 256 64.1
Nitab4.5_0000305g0260 Nicotiana tabacum HOM05D005854 ORTHO05D007175 3.8e-75 286.2 244 63.9
Solyc01g095420.3 Solanum lycopersicum HOM05D005854 ORTHO05D007175 5.0e-75 285.8 258 62.4
Nitab4.5_0004613g0050 Nicotiana tabacum HOM05D005854 ORTHO05D007175 1.1e-74 284.6 246 65.0
CAN.G78.154 Capsicum annuum HOM05D005854 ORTHO05D007175 3.2e-74 283.1 254 63.4
Cc02_g38850 Coffea canephora HOM05D005854 ORTHO05D007175 9.4e-74 281.6 259 61.4
Nn2g15034 Nelumbo nucifera HOM05D005854 ORTHO05D007175 8.0e-73 278.5 258 62.4
Lalb_Chr10g0100131 Lupinus albus HOM05D005854 ORTHO05D007175 3.0e-72 276.6 257 63.4
PGR031G0642 Punica granatum HOM05D005854 ORTHO05D007175 1.1e-71 274.6 240 64.6
RcHm_v2.0_Chr3g0451741 Rosa chinensis HOM05D005854 ORTHO05D007175 1.1e-71 274.6 246 63.0
COL.COLO4_22426 Corchorus olitorius HOM05D005854 ORTHO05D007175 2.6e-71 273.5 239 65.3
FvH4_6g03270 Fragaria vesca HOM05D005854 ORTHO05D007175 2.6e-71 273.5 247 63.2
MSTRG.17312 Avicennia marina HOM05D005854 ORTHO05D007175 3.3e-71 273.1 255 62.0
arahy.Tifrunner.gnm1.ann1.788ENG Arachis hypogaea HOM05D005854 ORTHO05D007175 4.4e-71 272.7 256 63.3
arahy.Tifrunner.gnm1.ann1.GVN9XJ Arachis hypogaea HOM05D005854 ORTHO05D007175 4.4e-71 272.7 256 63.3
Gohir.A02G138400 Gossypium hirsutum HOM05D005854 ORTHO05D007175 5.7e-71 272.3 247 65.2
Gorai.003G050300 Gossypium raimondii HOM05D005854 ORTHO05D007175 5.7e-71 272.3 247 65.2
Peaxi162Scf01012g00238 Petunia axillaris HOM05D005854 ORTHO05D007175 5.7e-71 272.3 246 63.0
Thecc.01G121600 Theobroma cacao HOM05D005854 ORTHO05D007175 5.7e-71 272.3 247 65.6
TWI53G0615 Tripterygium wilfordii HOM05D005854 ORTHO05D007175 9.7e-71 271.6 239 65.7
PGSC0003DMG400000203 Solanum tuberosum HOM05D005854 ORTHO05D007175 1.7e-70 270.8 240 64.2
SGA_v2.0_scaffold11G05711 Striga asiatica HOM05D005854 ORTHO05D007175 1.7e-70 270.8 248 60.9
Gohir.D03G049000 Gossypium hirsutum HOM05D005854 ORTHO05D007175 2.8e-70 270.0 247 64.4
Psat4g213880 Pisum sativum HOM05D005854 ORTHO05D007175 4.8e-70 269.2 253 62.1
TAR383G0748 Trochodendron aralioides HOM05D005854 ORTHO05D007175 1.1e-69 268.1 258 60.9
PSO801G0186 Papaver somniferum HOM05D005854 ORTHO05D007175 1.4e-69 267.7 256 59.8
Hund23260 Selenicereus undatus HOM05D005854 ORTHO05D007175 1.4e-69 267.7 254 61.0
Ca_25392_v3 Cicer arietinum L. HOM05D005854 ORTHO05D007175 1.8e-69 267.3 255 61.2
Duzib147G0085 Durio zibethinus HOM05D005854 ORTHO05D007175 1.8e-69 267.3 258 62.4
Gohir.A03G042400 Gossypium hirsutum HOM05D005854 ORTHO05D007175 1.8e-69 267.3 238 65.1
Manes.06G055200 Manihot esculenta HOM05D005854 ORTHO05D007175 9.1e-69 265.0 256 59.8
TPR.G21281 Trifolium pratense HOM05D005854 ORTHO05D007175 9.1e-69 265.0 256 60.5
FAN05G3773 Fragaria x ananassa HOM05D005854 ORTHO05D007175 1.2e-68 264.6 241 61.4
PSO339G2746 Papaver somniferum HOM05D005854 ORTHO05D007175 1.2e-68 264.6 257 58.8
Phvul.010G108400 Phaseolus vulgaris HOM05D005854 ORTHO05D007175 2.0e-68 263.8 236 64.0
Glyma.07G060800 Glycine max HOM05D005854 ORTHO05D007175 7.7e-68 261.9 236 63.6
MD04G1222200 Malus domestica HOM05D005854 ORTHO05D007175 1.0e-67 261.5 247 62.8
VMungo0331G0610 Vigna mungo HOM05D005854 ORTHO05D007175 1.3e-67 261.2 228 61.8
Cpa.g.sc10.16 Carica papaya HOM05D005854 ORTHO05D007175 2.9e-67 260.0 246 61.4
Haze_15607 Corylus avellana HOM05D005854 ORTHO05D007175 2.9e-67 260.0 248 60.1
Medtr8g023960 Medicago truncatula HOM05D005854 ORTHO05D007175 2.9e-67 260.0 260 60.0
Haze_23551 Corylus avellana HOM05D005854 ORTHO05D007175 5.0e-67 259.2 248 60.1
Cfa006467 Carpinus fangiana HOM05D005854 ORTHO05D007175 6.5e-67 258.8 248 59.7
Atru.chr10.871 Acer truncatum HOM05D005854 ORTHO05D007175 8.5e-67 258.5 248 61.7
Duzib187G0164 Durio zibethinus HOM05D005854 ORTHO05D007175 8.5e-67 258.5 247 62.8
Sc26g0000750 Simmondsia chinensis HOM05D005854 ORTHO05D007175 1.1e-66 258.1 376 47.3
QL04p059766 Quercus lobata HOM05D005854 ORTHO05D007175 5.5e-66 255.8 247 61.9
Sed0001947 Sechium edule HOM05D005854 ORTHO05D007175 5.5e-66 255.8 262 59.5
Ciclev10016474m.g Citrus clementina HOM05D005854 ORTHO05D007175 7.2e-66 255.4 246 60.6
AUR62004438 Chenopodium quinoa HOM05D005854 ORTHO05D007175 9.4e-66 255.0 255 58.4
EL10Ac1g00324 Beta vulgaris HOM05D005854 ORTHO05D007175 1.2e-65 254.6 253 58.5
AUR62023510 Chenopodium quinoa HOM05D005854 ORTHO05D007175 1.6e-65 254.2 255 58.0
CiPaw.02G037800 Carya illinoinensis HOM05D005854 ORTHO05D007175 3.6e-65 253.1 245 60.8
Ah.05g179960 Amaranthus hybridus HOM05D005854 ORTHO05D007175 6.1e-65 252.3 254 58.7
Rhsim07G0008000 Rhododendron simsii HOM05D005854 ORTHO05D007175 8.0e-65 251.9 254 58.3
Ca_23562_v3 Cicer arietinum L. HOM05D005854 ORTHO05D007175 1.0e-64 251.5 255 58.8
Potri.011G098000 Populus trichocarpa HOM05D005854 ORTHO05D007175 1.0e-64 251.5 256 57.8
unitig_26.g8933 Utricularia gibba HOM05D005854 ORTHO05D007175 3.0e-64 250.0 255 56.5
CsaV3_3G008340 Cucumis sativus L. HOM05D005854 ORTHO05D007175 1.2e-63 248.1 256 58.2
Glyma.16G029400 Glycine max HOM05D005854 ORTHO05D007175 4.4e-63 246.1 227 62.1
Aqoxy5G03507 Aquilegia oxysepala HOM05D005854 ORTHO05D007175 7.5e-63 245.4 253 57.3
MBI04_g37933_MAGBIO Magnolia biondii HOM05D005854 ORTHO05D007175 9.8e-63 245.0 248 59.7
Lj3g0026359 Lotus japonicus HOM05D005854 ORTHO05D007175 2.8e-62 243.4 251 59.8
ATR0594G138 Amborella trichopoda HOM05D005854 ORTHO05D007175 1.8e-61 240.7 248 59.3
Sabra11G0084900 Salix brachista HOM05D005854 ORTHO05D007175 2.7e-60 236.9 247 55.5
Sabra11G0091100 Salix brachista HOM05D005854 ORTHO05D007175 2.7e-60 236.9 247 55.5
HPP92_025111 Vanilla planifolia HOM05D005854 ORTHO05D007175 3.5e-60 236.5 249 57.4
MELO3C006052.2 Cucumis melo HOM05D005854 ORTHO05D007175 4.5e-60 236.1 256 56.2
FAN09G2134 Fragaria x ananassa HOM05D005854 ORTHO05D007175 5.9e-60 235.7 247 55.5
Gorai.003G131400 Gossypium raimondii HOM05D005854 ORTHO05D007175 5.9e-60 235.7 237 57.8
AL7G32980 Arabidopsis lyrata HOM05D005854 ORTHO05D007175 2.9e-59 233.4 242 57.0
Carub.0007s2029 Capsella rubella HOM05D005854 ORTHO05D007175 5.0e-59 232.6 249 56.2
Thhalv10026066m.g Eutrema salsugineum HOM05D005854 ORTHO05D007175 2.5e-58 230.3 248 55.6
CARHR252180 Cardamine hirsuta HOM05D005854 ORTHO05D007175 5.5e-58 229.2 264 52.3
AT4G05400 Arabidopsis thaliana HOM05D005854 ORTHO05D007175 3.6e-57 226.5 245 53.1
AT4G21140 Arabidopsis thaliana HOM05D005854 ORTHO05D007175 3.6e-57 226.5 238 55.9
Carub.0006s3331 Capsella rubella HOM05D005854 ORTHO05D007175 1.8e-56 224.2 261 52.9
Aa31LG9G9180 Aethionema arabicum HOM05D005854 ORTHO05D007175 2.3e-56 223.8 235 53.6
Os01g0511200 Oryza sativa ssp. japonica HOM05D005854 ORTHO05D007175 5.2e-56 222.6 248 53.2
Sp6g03690 Schrenkiella parvula HOM05D005854 ORTHO05D007175 6.8e-56 222.2 264 52.3
AL6G48990 Arabidopsis lyrata HOM05D005854 ORTHO05D007175 2.0e-55 220.7 263 51.0
A09p25360 Brassica napus HOM05D005854 ORTHO05D007175 4.4e-55 219.5 263 51.7
A01p12480 Brassica napus HOM05D005854 ORTHO05D007175 9.8e-55 218.4 255 52.5
Zm00001eb249970 Zea mays HOM05D005854 ORTHO05D007175 1.7e-54 217.6 246 53.7
Dinv32544 Davidia involucrata HOM05D005854 ORTHO05D007175 2.2e-54 217.2 223 55.6
Thhalv10028903m.g Eutrema salsugineum HOM05D005854 ORTHO05D007175 2.2e-54 217.2 264 50.8
C09p32360 Brassica napus HOM05D005854 ORTHO05D007175 2.4e-53 213.8 257 51.4
BolC9t56081H Brassica oleracea HOM05D005854 ORTHO05D007175 2.4e-53 213.8 257 51.4
BraA09t38118Z Brassica rapa HOM05D005854 ORTHO05D007175 4.1e-53 213.0 263 50.6
Gohir.D03G125200 Gossypium hirsutum HOM05D005854 ORTHO05D007175 2.7e-52 210.3 181 64.6
BraA01t01194Z Brassica rapa HOM05D005854 ORTHO05D007175 5.9e-52 209.1 255 51.0
BcaNung03840 Brassica carinata HOM05D005854 ORTHO05D007175 1.3e-51 208.0 255 49.0
CARHR227720 Cardamine hirsuta HOM05D005854 ORTHO05D007175 6.6e-51 205.7 240 51.2
Oeu007833.1 Olea europaea HOM05D005854 ORTHO05D007175 1.5e-50 204.5 186 62.9
C01p15070 Brassica napus HOM05D005854 ORTHO05D007175 1.9e-50 204.1 255 49.8
BcaC09g51255 Brassica carinata HOM05D005854 ORTHO05D007175 7.3e-50 202.2 255 49.4
BolC1t01456H Brassica oleracea HOM05D005854 ORTHO05D007175 7.3e-50 202.2 255 49.4
BcaB01g01902 Brassica carinata HOM05D005854 ORTHO05D007175 6.1e-49 199.1 264 48.9
Cfa005769 Carpinus fangiana HOM05D005854 ORTHO05D007175 1.1e-42 178.3 193 55.4
Prupe.6G341300 Prunus persica HOM05D005854 ORTHO05D007175 2.8e-41 173.7 122 74.6
Actinidia20188 Actinidia chinensis HOM05D005854 ORTHO05D007175 4.3e-34 149.8 255 42.7
Sp7g19220 Schrenkiella parvula HOM05D005854 ORTHO05D007175 1.6e-33 147.9 123 65.0
Lsat_1_v5_gn_3_52500 Lactuca sativa HOM05D005854 ORTHO05D007175 3.2e-29 133.7 79 89.9
Lsat_1_v5_gn_3_52480 Lactuca sativa HOM05D005854 ORTHO05D007175 1.6e-25 121.3 68 91.2
MD12G1238400 Malus domestica HOM05D005854 ORTHO05D007175 4.7e-25 119.8 131 57.3
Lsat_1_v5_gn_4_144561 Lactuca sativa HOM05D005854 ORTHO05D007175 1.3e-22 111.7 124 56.5
AagrBONN_evm.TU.Sc2ySwM_362.2286 Anthoceros agrestis HOM05D005854 ORTHO05D007175 2.9e-22 110.5 178 39.3
Cc00_g15140 Coffea canephora HOM05D005854 ORTHO05D007175 2.9e-22 110.5 151 45.7
Pp3c17_23470 Physcomitrium patens HOM05D005854 ORTHO05D007175 7.1e-21 105.9 214 33.6
CDE04G0249 Ceratophyllum demersum HOM05D005854 ORTHO05D007175 5.1e-19 99.8 139 44.6
TAR369G1106 Trochodendron aralioides HOM05D005854 ORTHO05D007175 5.1e-19 99.8 76 71.1
CBR_g40874 Chara braunii HOM05D005854 ORTHO05D007175 3.6e-17 93.6 81 58.0
Mapoly0007s0267 Marchantia polymorpha HOM05D005854 ORTHO05D007175 5.2e-16 89.7 154 41.6
FvH4_6g03230 Fragaria vesca HOM05D005854 ORTHO05D007175 2.0e-15 87.8 93 52.7
Nn3g18457 Nelumbo nucifera HOM05D005854 ORTHO05D007175 6.6e-11 72.8 87 47.1
FvH4_6g03240 Fragaria vesca HOM05D005854 ORTHO05D007175 2.5e-10 70.9 61 60.7
RcHm_v2.0_Chr3g0451651 Rosa chinensis HOM05D005854 ORTHO05D007175 1.5e-07 61.6 58 55.2


User provided reference genes

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