Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr04g0119861 Helianthus annuus HOM05D002214 ORTHO05D007367 9.5e-172 606.7 291 100.0
Lsat_1_v5_gn_7_35840 Lactuca sativa HOM05D002214 ORTHO05D007367 1.1e-135 486.9 286 79.4
ECA236G0637 Erigeron canadensis HOM05D002214 ORTHO05D001664 9.6e-132 473.8 286 78.0
Hma1.2p1_0685F.1_g203260 Hydrangea macrophylla HOM05D002214 ORTHO05D007367 5.0e-96 355.1 282 61.0
Rhsim07G0058900 Rhododendron simsii HOM05D002214 ORTHO05D007367 1.9e-95 353.2 286 58.7
Actinidia19424 Actinidia chinensis HOM05D002214 ORTHO05D007367 1.6e-94 350.1 282 59.2
Duzib138G1340 Durio zibethinus HOM05D002214 ORTHO05D007367 3.3e-92 342.4 274 57.7
DCAR_022375 Daucus carota HOM05D002214 ORTHO05D007367 3.1e-90 335.9 281 54.8
Ciclev10031605m.g Citrus clementina HOM05D002214 ORTHO05D007367 7.0e-90 334.7 286 56.3
Potri.009G056500 Populus trichocarpa HOM05D002214 ORTHO05D007367 2.9e-88 329.3 284 56.7
TWI09G0406 Tripterygium wilfordii HOM05D002214 ORTHO05D007367 5.0e-88 328.6 284 54.9
Gorai.004G170100 Gossypium raimondii HOM05D002214 ORTHO05D007367 2.5e-87 326.2 280 52.5
SGA_v2.0_scaffold5G02954 Striga asiatica HOM05D002214 ORTHO05D007367 3.2e-87 325.9 287 55.4
Cfa010812 Carpinus fangiana HOM05D002214 ORTHO05D007367 9.4e-87 324.3 274 54.0
CiPaw.14G003400 Carya illinoinensis HOM05D002214 ORTHO05D007367 9.4e-87 324.3 284 55.3
Gohir.A08G142300 Gossypium hirsutum HOM05D002214 ORTHO05D007367 1.6e-86 323.6 280 52.5
vmacro13697 Vaccinium macrocarpon HOM05D002214 ORTHO05D007367 1.4e-85 320.5 340 49.7
MD07G1023200 Malus domestica HOM05D002214 ORTHO05D007367 1.8e-85 320.1 268 54.9
RcHm_v2.0_Chr1g0318361 Rosa chinensis HOM05D002214 ORTHO05D007367 3.0e-85 319.3 278 53.2
Thecc.01G406200 Theobroma cacao HOM05D002214 ORTHO05D007367 6.7e-85 318.2 281 51.6
Eucgr.G03320 Eucalyptus grandis HOM05D002214 ORTHO05D007367 1.2e-84 317.4 262 55.3
GSVIVG01032215001 Vitis vinifera HOM05D002214 ORTHO05D007367 2.0e-84 316.6 282 55.3
CANSAT80G0536 Cannabis sativa HOM05D002214 ORTHO05D007367 4.4e-84 315.5 282 52.8
Eucgr.G03301 Eucalyptus grandis HOM05D002214 ORTHO05D007367 7.5e-84 314.7 262 54.6
Migut.N01800 Erythranthe guttata HOM05D002214 ORTHO05D007367 1.7e-83 313.5 284 53.9
Nn7g36334 Nelumbo nucifera HOM05D002214 ORTHO05D007367 6.3e-83 311.6 279 53.0
Carub.0005s1835 Capsella rubella HOM05D002214 ORTHO05D007367 1.1e-82 310.8 285 53.0
BcaC06g33020 Brassica carinata HOM05D002214 ORTHO05D007367 4.1e-82 308.9 281 54.1
FAN10G2270 Fragaria x ananassa HOM05D002214 ORTHO05D007367 4.1e-82 308.9 278 51.8
Manes.07G010800 Manihot esculenta HOM05D002214 ORTHO05D007367 4.1e-82 308.9 285 53.7
FAN03G2729 Fragaria x ananassa HOM05D002214 ORTHO05D007367 7.0e-82 308.1 278 51.8
Sc11g0009040 Simmondsia chinensis HOM05D002214 ORTHO05D007367 7.0e-82 308.1 288 51.0
AT3G52030 Arabidopsis thaliana HOM05D002214 ORTHO05D007367 1.2e-81 307.4 281 52.7
C07p46730 Brassica napus HOM05D002214 ORTHO05D007367 1.2e-81 307.4 281 53.7
Thhalv10010397m.g Eutrema salsugineum HOM05D002214 ORTHO05D007367 1.2e-81 307.4 281 53.7
CARHR161660 Cardamine hirsuta HOM05D002214 ORTHO05D007367 2.0e-81 306.6 282 52.8
PGR031G3638 Punica granatum HOM05D002214 ORTHO05D007367 3.5e-81 305.8 327 46.8
CAN.G909.6 Capsicum annuum HOM05D002214 ORTHO05D007367 4.5e-81 305.4 264 54.2
THA.LOC104817574 Tarenaya hassleriana HOM05D002214 ORTHO05D007367 1.0e-80 304.3 276 51.8
A03p48610 Brassica napus HOM05D002214 ORTHO05D007367 1.3e-80 303.9 281 53.7
Prupe.2G024000 Prunus persica HOM05D002214 ORTHO05D007367 1.3e-80 303.9 268 52.6
BcaC06g33377 Brassica carinata HOM05D002214 ORTHO05D007367 1.7e-80 303.5 281 53.0
SalBow6G2835 Salvia bowleyana HOM05D002214 ORTHO05D007367 5.0e-80 302.0 305 50.8
Oeu051405.1 Olea europaea HOM05D002214 ORTHO05D007367 1.9e-79 300.1 265 55.8
Solyc01g087910.4 Solanum lycopersicum HOM05D002214 ORTHO05D007367 4.2e-79 298.9 283 52.3
Sp5g10260 Schrenkiella parvula HOM05D002214 ORTHO05D007367 5.5e-79 298.5 281 52.3
Sopen01g034840 Solanum pennellii HOM05D002214 ORTHO05D007367 1.2e-78 297.4 282 51.1
CSS0000146 Camellia sinensis var. sinensis HOM05D002214 ORTHO05D007367 1.6e-78 297.0 283 51.9
Medtr3g034210 Medicago truncatula HOM05D002214 ORTHO05D007367 1.6e-78 297.0 289 49.5
Aqoxy2G00221 Aquilegia oxysepala HOM05D002214 ORTHO05D007367 6.1e-78 295.0 265 54.7
AL5G32570 Arabidopsis lyrata HOM05D002214 ORTHO05D007367 3.0e-77 292.7 296 50.3
BolC7t45191H Brassica oleracea HOM05D002214 ORTHO05D007367 6.8e-77 291.6 298 50.0
Cc02_g28820 Coffea canephora HOM05D002214 ORTHO05D007367 6.8e-77 291.6 383 43.3
Phvul.005G035100 Phaseolus vulgaris HOM05D002214 ORTHO05D007367 1.5e-76 290.4 283 48.8
AUR62023095 Chenopodium quinoa HOM05D002214 ORTHO05D007367 4.4e-76 288.9 258 53.1
Psat5g212440 Pisum sativum HOM05D002214 ORTHO05D007367 5.7e-76 288.5 293 46.8
Sed0008197 Sechium edule HOM05D002214 ORTHO05D007367 5.7e-76 288.5 279 47.3
Lj3g0007976 Lotus japonicus HOM05D002214 ORTHO05D007367 7.5e-76 288.1 298 48.7
unitig_22.g5896 Utricularia gibba HOM05D002214 ORTHO05D007367 7.5e-76 288.1 268 49.3
BraA03t13966Z Brassica rapa HOM05D002214 ORTHO05D007367 1.7e-75 287.0 299 49.5
Ca_24837_v3 Cicer arietinum L. HOM05D002214 ORTHO05D007367 1.7e-75 287.0 286 46.2
VMungo1217G0001 Vigna mungo HOM05D002214 ORTHO05D007367 4.8e-75 285.4 283 47.3
Glyma.11G159230 Glycine max HOM05D002214 ORTHO05D007367 8.3e-75 284.6 266 49.2
Lalb_Chr25g0282551 Lupinus albus HOM05D002214 ORTHO05D007367 8.3e-75 284.6 293 46.1
TPR.G14558 Trifolium pratense HOM05D002214 ORTHO05D007367 8.3e-75 284.6 284 47.5
CsaV3_7G030710 Cucumis sativus L. HOM05D002214 ORTHO05D007367 7.0e-74 281.6 285 46.7
arahy.Tifrunner.gnm1.ann1.IP56PK Arachis hypogaea HOM05D002214 ORTHO05D007367 1.3e-72 277.3 283 46.6
arahy.Tifrunner.gnm1.ann1.KRTV89 Arachis hypogaea HOM05D002214 ORTHO05D007367 9.5e-71 271.2 283 46.3
QL04p010195 Quercus lobata HOM05D002214 ORTHO05D007367 4.7e-70 268.9 286 47.2
Haze_03149 Corylus avellana HOM05D002214 ORTHO05D007367 6.1e-70 268.5 416 37.0
Haze_03152 Corylus avellana HOM05D002214 ORTHO05D007367 6.1e-70 268.5 416 37.0
PSO339G3363 Papaver somniferum HOM05D002214 ORTHO05D007367 6.1e-70 268.5 281 49.5
PSO384G3385 Papaver somniferum HOM05D002214 ORTHO05D007367 1.8e-69 266.9 280 49.3
ATR0782G063 Amborella trichopoda HOM05D002214 ORTHO05D007367 1.2e-68 264.2 262 47.3
Peaxi162Scf01270g00126 Petunia axillaris HOM05D002214 ORTHO05D007367 6.3e-67 258.5 306 45.1
QL04p010068 Quercus lobata HOM05D002214 ORTHO05D007367 1.4e-66 257.3 206 58.3
TAR633G1256 Trochodendron aralioides HOM05D002214 ORTHO05D007367 4.1e-66 255.8 205 57.6
FAN06G2164 Fragaria x ananassa HOM05D002214 ORTHO05D007367 5.4e-66 255.4 232 51.7
Zm00001eb091260 Zea mays HOM05D002214 ORTHO05D007367 3.5e-65 252.7 278 45.0
HPP92_021380 Vanilla planifolia HOM05D002214 ORTHO05D007367 1.3e-64 250.8 269 45.7
MBI03_g28525_MAGBIO Magnolia biondii HOM05D002214 ORTHO05D007367 5.0e-64 248.8 276 45.3
Os11g0182400 Oryza sativa ssp. japonica HOM05D002214 ORTHO05D007367 6.6e-64 248.4 256 45.3
Atru.chr11.2515 Acer truncatum HOM05D002214 ORTHO05D007367 2.1e-62 243.4 280 45.4
Dinv07431 Davidia involucrata HOM05D002214 ORTHO05D005113 8.0e-62 241.5 158 68.4
Nitab4.5_0001244g0060 Nicotiana tabacum HOM05D002214 ORTHO05D007367 1.0e-61 241.1 266 45.9
Ah.16g100650 Amaranthus hybridus HOM05D002214 ORTHO05D007367 4.0e-61 239.2 195 57.9
ClCG09G004430 Citrullus lanatus HOM05D002214 ORTHO05D007367 1.5e-60 237.3 237 48.1
Gohir.D08G163300 Gossypium hirsutum HOM05D002214 ORTHO05D007367 2.2e-59 233.4 164 61.0
FvH4_7g01770 Fragaria vesca HOM05D002214 ORTHO05D007367 8.9e-53 211.5 157 59.2
Cpa.g.sc125.51 Carica papaya HOM05D002214 ORTHO05D007367 5.8e-52 208.8 241 46.5
EL10Ac2g04369 Beta vulgaris HOM05D002214 ORTHO05D007367 1.9e-50 203.8 261 41.8
FvH4_2g17890 Fragaria vesca HOM05D002214 ORTHO05D007367 2.1e-49 200.3 274 45.3
FAN24G1013 Fragaria x ananassa HOM05D002214 ORTHO05D007367 2.1e-49 200.3 274 45.3
FAN15G3441 Fragaria x ananassa HOM05D002214 ORTHO05D007367 6.6e-48 195.3 274 44.2
QL04p010150 Quercus lobata HOM05D002214 ORTHO05D007367 6.6e-48 195.3 204 48.5
Nitab4.5_0008942g0050 Nicotiana tabacum HOM05D002214 ORTHO05D007367 2.5e-47 193.4 284 38.7
QL04p010120 Quercus lobata HOM05D002214 ORTHO05D007367 3.3e-47 193.0 177 53.7
RcHm_v2.0_Chr6g0283161 Rosa chinensis HOM05D002214 ORTHO05D007367 6.2e-46 188.7 274 42.7
FAN27G1164 Fragaria x ananassa HOM05D002214 ORTHO05D007367 4.0e-45 186.0 283 40.6
Aa31LG10G14890 Aethionema arabicum HOM05D002214 ORTHO05D007367 2.6e-44 183.3 202 45.0
FAN24G2408 Fragaria x ananassa HOM05D002214 ORTHO05D007367 5.8e-44 182.2 270 41.5
FAN27G1816 Fragaria x ananassa HOM05D002214 ORTHO05D007367 3.2e-42 176.4 272 40.8
Hund16632 Selenicereus undatus HOM05D002214 ORTHO05D007367 6.2e-38 162.2 168 48.2
AagrBONN_evm.TU.Sc2ySwM_344.2511 Anthoceros agrestis HOM05D002214 ORTHO05D007367 2.4e-34 150.2 282 29.8
CBR_g46897 Chara braunii HOM05D002214 ORTHO05D007367 3.4e-28 129.8 306 25.8
AUR62009418 Chenopodium quinoa HOM05D002214 ORTHO05D007367 4.4e-28 129.4 260 30.8
SMO137G0282 Selaginella moellendorffii HOM05D002214 ORTHO05D007367 2.2e-27 127.1 263 28.9
Pp3c8_19810 Physcomitrium patens HOM05D002214 ORTHO05D007367 8.4e-27 125.2 254 28.0
SEGI_30351 Sequoiadendron giganteum HOM05D002214 ORTHO05D007367 4.2e-26 122.9 106 50.0
COL.COLO4_12334 Corchorus olitorius HOM05D000031 ORTHO05D000030 3.9e-24 116.3 131 42.0
Hma1.2p1_0685F.1_g203250 Hydrangea macrophylla HOM05D002214 ORTHO05D007367 1.9e-23 114.0 118 50.8
MELO3C023585.2 Cucumis melo HOM05D002214 ORTHO05D007367 2.5e-23 113.6 282 28.7
Mapoly0009s0234 Marchantia polymorpha HOM05D002214 ORTHO05D007367 2.5e-23 113.6 257 29.6
Thecc.01G405700 Theobroma cacao HOM05D002214 ORTHO05D007367 3.3e-23 113.2 98 45.9
Thecc.01G405800 Theobroma cacao HOM05D002214 ORTHO05D007367 7.3e-23 112.1 78 62.8
SEGI_07097 Sequoiadendron giganteum HOM05D002214 ORTHO05D007367 9.6e-23 111.7 135 41.5
Lj9C641T18 Lonicera japonica HOM05D002214 ORTHO05D007367 1.3e-16 91.3 104 47.1
Duzib133G0745 Durio zibethinus HOM05D002214 ORTHO05D007367 1.6e-14 84.3 64 53.1
MD07G1016900 Malus domestica HOM05D002214 ORTHO05D007367 4.0e-13 79.7 58 63.8
FAN27G0150 Fragaria x ananassa HOM05D002214 ORTHO05D007367 2.7e-09 67.0 126 33.3
FvH4_2g17910 Fragaria vesca HOM05D002214 ORTHO05D007367 2.5e-07 60.5 78 44.9
FAN24G3278 Fragaria x ananassa HOM05D002214 ORTHO05D007367 2.5e-07 60.5 78 44.9
Cpa.g.sc125.50 Carica papaya HOM05D002214 ORTHO05D007367 5.7e-07 59.3 48 52.1
Cfa025993 Carpinus fangiana HOM05D002214 ORTHO05D125925 5.7e-07 59.3 245 22.4
Lj9A641T67 Lonicera japonica HOM05D002214 ORTHO05D007367 1.3e-06 58.2 53 50.9
CDE04G0429 Ceratophyllum demersum HOM05D002214 ORTHO05D007367 8.2e-06 55.5 46 43.5


User provided reference genes

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