Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr04g0107881 Helianthus annuus HOM05D000215 ORTHO05D227269 2.2e-154 548.9 274 100.0
HanXRQChr04g0107791 Helianthus annuus HOM05D000215 ORTHO05D226739 9.3e-44 181.4 271 38.4
TPR.G26839 Trifolium pratense HOM05D000215 ORTHO05D002282 6.7e-18 95.5 268 23.9
Rhsim09G0131700 Rhododendron simsii HOM05D000215 ORTHO05D002282 3.7e-16 89.7 274 24.8
CSS0009571 Camellia sinensis var. sinensis HOM05D000215 ORTHO05D002282 1.8e-15 87.4 223 25.1
SGA_v2.0_scaffold7G04031 Striga asiatica HOM05D000215 ORTHO05D002282 1.8e-15 87.4 267 25.1
Psat3g150640 Pisum sativum HOM05D000215 ORTHO05D002282 2.4e-15 87.0 268 22.8
Medtr7g053260 Medicago truncatula HOM05D000215 ORTHO05D002282 3.1e-15 86.7 268 23.5
Sabra19G0039300 Salix brachista HOM05D000215 ORTHO05D002282 1.2e-14 84.7 226 25.2
CARHR194740 Cardamine hirsuta HOM05D000215 ORTHO05D002282 2.0e-14 84.0 212 25.5
Prupe.6G355500 Prunus persica HOM05D000215 ORTHO05D002282 2.0e-14 84.0 225 22.7
Sabra19G0036200 Salix brachista HOM05D000215 ORTHO05D002282 4.5e-14 82.8 226 24.8
Sc17g0001880 Simmondsia chinensis HOM05D000215 ORTHO05D002282 5.9e-14 82.4 234 24.4
Peaxi162Scf00071g10138 Petunia axillaris HOM05D000215 ORTHO05D002282 1.3e-13 81.3 226 24.8
GSVIVG01026372001 Vitis vinifera HOM05D000215 ORTHO05D002282 2.2e-13 80.5 228 25.4
VMungo0720G0557 Vigna mungo HOM05D000215 ORTHO05D002282 3.8e-13 79.7 166 29.5
Cfa006302 Carpinus fangiana HOM05D000215 ORTHO05D002282 6.5e-13 79.0 226 24.3
EL10Ac4g09797 Beta vulgaris HOM05D000215 ORTHO05D002282 1.9e-12 77.4 251 21.9
Thecc.05G261100 Theobroma cacao HOM05D000215 ORTHO05D002282 1.9e-12 77.4 272 24.6
FAN02G1793 Fragaria x ananassa HOM05D000215 ORTHO05D002282 4.2e-12 76.3 223 24.2
COL.COLO4_20543 Corchorus olitorius HOM05D000215 ORTHO05D002282 1.2e-11 74.7 268 23.5
DCAR_012687 Daucus carota HOM05D000215 ORTHO05D002282 1.6e-11 74.3 271 22.1
VMungo0720G2636 Vigna mungo HOM05D000215 ORTHO05D002282 2.1e-11 73.9 174 25.9
EL10Ac8g19655 Beta vulgaris HOM05D000215 ORTHO05D002282 2.7e-11 73.6 200 25.5
Rhsim13G0051100 Rhododendron simsii HOM05D000215 ORTHO05D002282 4.7e-11 72.8 223 22.9
Eucgr.H04159 Eucalyptus grandis HOM05D000215 ORTHO05D002282 1.0e-10 71.6 232 25.4
Potri.013G052200 Populus trichocarpa HOM05D000215 ORTHO05D002282 1.8e-10 70.9 226 23.9
EL10Ac8g19699 Beta vulgaris HOM05D000215 ORTHO05D002282 6.7e-10 68.9 238 22.7
MD05G1165400 Malus domestica HOM05D000215 ORTHO05D002282 6.7e-10 68.9 225 21.8
DCAR_004755 Daucus carota HOM05D000215 ORTHO05D002282 8.8e-10 68.6 272 21.0
CiPaw.14G041300 Carya illinoinensis HOM05D000215 ORTHO05D002282 1.1e-09 68.2 223 22.0
TAR365G1210 Trochodendron aralioides HOM05D000215 ORTHO05D002282 1.1e-09 68.2 223 22.4
unitig_26.g9434 Utricularia gibba HOM05D000215 ORTHO05D002282 1.5e-09 67.8 178 24.7
AUR62001175 Chenopodium quinoa HOM05D000215 ORTHO05D002282 2.0e-09 67.4 223 19.7
FAN24G0078 Fragaria x ananassa HOM05D000215 ORTHO05D002282 3.3e-09 66.6 223 22.0
FvH4_2g18070 Fragaria vesca HOM05D000215 ORTHO05D002282 4.4e-09 66.2 223 22.0
FAN15G0749 Fragaria x ananassa HOM05D000215 ORTHO05D002282 7.4e-09 65.5 223 22.0
RcHm_v2.0_Chr6g0283461 Rosa chinensis HOM05D000215 ORTHO05D002282 7.4e-09 65.5 223 22.0
FAN27G1077 Fragaria x ananassa HOM05D000215 ORTHO05D002282 9.7e-09 65.1 223 21.5
Os02g0488600 Oryza sativa ssp. japonica HOM05D000215 ORTHO05D002282 9.7e-09 65.1 268 20.9
Sp6g25970 Schrenkiella parvula HOM05D000215 ORTHO05D002282 1.3e-08 64.7 238 22.3
THA.LOC104822474 Tarenaya hassleriana HOM05D000215 ORTHO05D002282 2.2e-08 63.9 268 22.0
Atru.chr2.1233 Acer truncatum HOM05D000215 ORTHO05D002282 2.8e-08 63.5 118 32.2
DCAR_018630 Daucus carota HOM05D000215 ORTHO05D002282 2.8e-08 63.5 273 20.9
ECA248G2781 Erigeron canadensis HOM05D000215 ORTHO05D002282 2.8e-08 63.5 225 21.8
Phvul.007G115800 Phaseolus vulgaris HOM05D000215 ORTHO05D002282 2.8e-08 63.5 222 22.5
AL267U10010 Arabidopsis lyrata HOM05D000215 ORTHO05D002282 3.7e-08 63.2 268 22.0
Actinidia23781 Actinidia chinensis HOM05D000215 ORTHO05D002282 4.8e-08 62.8 223 21.5
SGA_v2.0_scaffold83G26369 Striga asiatica HOM05D000134 ORTHO05D002282 6.3e-08 62.4 235 22.1
Prupe.8G193500 Prunus persica HOM05D000215 ORTHO05D002282 8.2e-08 62.0 223 21.1
vmacro02804 Vaccinium macrocarpon HOM05D000215 ORTHO05D002282 8.2e-08 62.0 223 19.7
AL6G29570 Arabidopsis lyrata HOM05D000215 ORTHO05D002282 1.1e-07 61.6 182 24.2
AT3G07360 Arabidopsis thaliana HOM05D000215 ORTHO05D002282 1.1e-07 61.6 268 21.6
AUR62000655 Chenopodium quinoa HOM05D000215 ORTHO05D002282 1.1e-07 61.6 230 20.4
Solyc04g050770.2 Solanum lycopersicum HOM05D000215 ORTHO05D002282 2.4e-07 60.5 269 21.9
Aqoxy5G04065 Aquilegia oxysepala HOM05D000215 ORTHO05D002282 4.1e-07 59.7 140 27.9
A03p08780 Brassica napus HOM05D000215 ORTHO05D002282 4.1e-07 59.7 186 23.7
CAN.G961.3 Capsicum annuum HOM05D000215 ORTHO05D002282 4.1e-07 59.7 226 21.2
Ah.08g218820 Amaranthus hybridus HOM05D000215 ORTHO05D002282 5.3e-07 59.3 223 19.3
AUR62005298 Chenopodium quinoa HOM05D000215 ORTHO05D002282 5.3e-07 59.3 230 19.6
TPR.G4793 Trifolium pratense HOM05D000215 ORTHO05D002282 5.3e-07 59.3 223 20.6
Aa31LG5G17930 Aethionema arabicum HOM05D000215 ORTHO05D002282 6.9e-07 58.9 224 20.5
AUR62022150 Chenopodium quinoa HOM05D000215 ORTHO05D002282 9.1e-07 58.5 229 18.3
Carub.0003s0691 Capsella rubella HOM05D000215 ORTHO05D002282 1.5e-06 57.8 268 20.9
C03p10270 Brassica napus HOM05D000215 ORTHO05D002282 2.0e-06 57.4 185 23.2
BraA03t10203Z Brassica rapa HOM05D000215 ORTHO05D002282 2.0e-06 57.4 185 23.2
Ca_09475_v3 Cicer arietinum L. HOM05D000215 ORTHO05D002282 2.6e-06 57.0 223 20.6
Lj2C50G2 Lonicera japonica HOM05D000215 ORTHO05D002282 2.6e-06 57.0 230 21.3
Medtr7g116600 Medicago truncatula HOM05D000215 ORTHO05D002282 2.6e-06 57.0 223 19.7
Glyma.03G253100 Glycine max HOM05D000215 ORTHO05D002282 7.7e-06 55.5 225 19.6


User provided reference genes

Program Settings