Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr04g0099791 Helianthus annuus HOM05D002031 ORTHO05D002143 1.0e-131 473.4 241 100.0
HanXRQChr11g0330011 Helianthus annuus HOM05D002031 ORTHO05D002143 2.4e-112 409.1 235 89.8
HanXRQChr15g0492361 Helianthus annuus HOM05D002031 ORTHO05D002143 1.3e-105 386.7 235 83.8
ECA236G1750 Erigeron canadensis HOM05D002031 ORTHO05D002143 7.3e-101 370.9 237 81.9
Lsat_1_v5_gn_7_99460 Lactuca sativa HOM05D002031 ORTHO05D002143 3.0e-86 322.4 235 72.3
Cpa.g.sc229.4 Carica papaya HOM05D002031 ORTHO05D002143 1.1e-83 313.9 241 68.9
MD10G1197600 Malus domestica HOM05D002031 ORTHO05D002143 5.8e-82 308.1 238 67.6
Lalb_Chr01g0015981 Lupinus albus HOM05D002031 ORTHO05D002143 7.6e-82 307.8 239 66.9
MSTRG.12855 Avicennia marina HOM05D002031 ORTHO05D002143 2.2e-81 306.2 240 66.2
Lalb_Chr25g0285241 Lupinus albus HOM05D002031 ORTHO05D002143 1.1e-80 303.9 228 67.1
Prupe.4G144300 Prunus persica HOM05D002031 ORTHO05D002143 2.4e-80 302.8 236 68.6
PGR031G0914 Punica granatum HOM05D002031 ORTHO05D002143 7.1e-80 301.2 243 64.2
COL.COLO4_38376 Corchorus olitorius HOM05D002031 ORTHO05D002143 9.2e-80 300.8 236 66.5
CSS0015742 Camellia sinensis var. sinensis HOM05D002031 ORTHO05D002143 1.6e-79 300.1 238 66.4
Duzib213G0092 Durio zibethinus HOM05D002031 ORTHO05D002143 4.6e-79 298.5 231 69.3
MSTRG.14998 Avicennia marina HOM05D002031 ORTHO05D002143 1.0e-78 297.4 239 65.3
MD05G1213700 Malus domestica HOM05D002031 ORTHO05D002143 1.3e-78 297.0 236 66.5
Dinv21344 Davidia involucrata HOM05D002031 ORTHO05D002143 5.1e-78 295.0 240 65.4
Glyma.08G174200 Glycine max HOM05D002031 ORTHO05D002143 6.6e-78 294.7 244 61.9
Glyma.15G253000 Glycine max HOM05D002031 ORTHO05D002143 6.6e-78 294.7 231 64.5
QL04p073107 Quercus lobata HOM05D002031 ORTHO05D002143 6.6e-78 294.7 238 66.4
Thecc.07G159700 Theobroma cacao HOM05D002031 ORTHO05D002143 6.6e-78 294.7 239 67.4
Gohir.D01G079500 Gossypium hirsutum HOM05D002031 ORTHO05D002143 8.6e-78 294.3 233 67.0
Oeu012709.1 Olea europaea HOM05D002031 ORTHO05D002143 8.6e-78 294.3 240 64.2
Actinidia20593 Actinidia chinensis HOM05D002031 ORTHO05D002143 1.9e-77 293.1 240 66.2
THA.LOC104812285 Tarenaya hassleriana HOM05D002031 ORTHO05D002143 1.9e-77 293.1 239 63.6
TWI38G0855 Tripterygium wilfordii HOM05D002031 ORTHO05D002143 2.5e-77 292.7 243 63.8
Gorai.002G104300 Gossypium raimondii HOM05D002031 ORTHO05D002143 3.3e-77 292.4 233 67.0
Eucgr.F01437 Eucalyptus grandis HOM05D002031 ORTHO05D002143 4.3e-77 292.0 238 65.1
Atru.chr2.1845 Acer truncatum HOM05D002031 ORTHO05D002143 5.6e-77 291.6 236 65.7
Lj3g0011562 Lotus japonicus HOM05D002031 ORTHO05D002143 7.3e-77 291.2 231 66.2
Phvul.005G054600 Phaseolus vulgaris HOM05D002031 ORTHO05D002143 7.3e-77 291.2 230 64.8
Actinidia12334 Actinidia chinensis HOM05D002031 ORTHO05D002143 9.6e-77 290.8 239 66.5
Manes.15G101300 Manihot esculenta HOM05D002031 ORTHO05D002143 1.6e-76 290.0 238 63.9
SalBow8G4653 Salvia bowleyana HOM05D002031 ORTHO05D002143 1.6e-76 290.0 239 64.0
SalBow7G1750 Salvia bowleyana HOM05D002031 ORTHO05D002143 2.1e-76 289.7 239 64.0
Nn4g26631 Nelumbo nucifera HOM05D002031 ORTHO05D002143 2.8e-76 289.3 238 64.3
CANSAT56G3161 Cannabis sativa HOM05D002031 ORTHO05D002143 6.2e-76 288.1 232 64.7
Gohir.A01G095300 Gossypium hirsutum HOM05D002031 ORTHO05D002143 6.2e-76 288.1 234 65.4
Peaxi162Scf00111g00527 Petunia axillaris HOM05D002031 ORTHO05D002143 8.1e-76 287.7 238 64.3
DCAR_017559 Daucus carota HOM05D002031 ORTHO05D002143 1.1e-75 287.3 241 63.5
FAN16G0016 Fragaria x ananassa HOM05D002031 ORTHO05D002143 1.1e-75 287.3 235 65.1
Nitab4.5_0004166g0050 Nicotiana tabacum HOM05D002031 ORTHO05D002143 1.1e-75 287.3 239 64.4
VMungo1080G0437 Vigna mungo HOM05D002031 ORTHO05D002143 1.1e-75 287.3 235 64.3
arahy.Tifrunner.gnm1.ann1.HGAE8N Arachis hypogaea HOM05D002031 ORTHO05D002143 1.8e-75 286.6 242 63.2
arahy.Tifrunner.gnm1.ann1.PV2JBQ Arachis hypogaea HOM05D002031 ORTHO05D002143 1.8e-75 286.6 242 63.2
Nn3g20354 Nelumbo nucifera HOM05D002031 ORTHO05D002143 4.0e-75 285.4 240 62.1
TWI38G0655 Tripterygium wilfordii HOM05D002031 ORTHO05D002143 4.0e-75 285.4 243 62.6
Migut.H02058 Erythranthe guttata HOM05D002031 ORTHO05D002143 5.2e-75 285.0 226 65.9
CSS0037066 Camellia sinensis var. sinensis HOM05D002031 ORTHO05D002143 8.9e-75 284.3 242 63.2
CSS0037709 Camellia sinensis var. sinensis HOM05D002031 ORTHO05D002143 8.9e-75 284.3 242 63.6
FAN25G2027 Fragaria x ananassa HOM05D002031 ORTHO05D002143 8.9e-75 284.3 235 64.3
CAN.G585.3 Capsicum annuum HOM05D002031 ORTHO05D002143 1.5e-74 283.5 232 65.1
FAN21G3742 Fragaria x ananassa HOM05D002031 ORTHO05D002143 1.5e-74 283.5 235 64.7
Nitab4.5_0001612g0100 Nicotiana tabacum HOM05D002031 ORTHO05D002143 1.5e-74 283.5 239 64.0
TAR624G1050 Trochodendron aralioides HOM05D002031 ORTHO05D002143 1.5e-74 283.5 238 62.6
Haze_08514 Corylus avellana HOM05D002031 ORTHO05D002143 2.6e-74 282.7 239 63.2
FvH4_3g16100 Fragaria vesca HOM05D002031 ORTHO05D002143 2.6e-74 282.7 235 64.7
RcHm_v2.0_Chr5g0027081 Rosa chinensis HOM05D002031 ORTHO05D002143 2.6e-74 282.7 235 63.8
Manes.03G090800 Manihot esculenta HOM05D002031 ORTHO05D002143 3.4e-74 282.3 235 62.6
Cfa019443 Carpinus fangiana HOM05D002031 ORTHO05D002143 5.8e-74 281.6 239 62.3
Eucgr.F01432 Eucalyptus grandis HOM05D002031 ORTHO05D002143 5.8e-74 281.6 218 67.9
CiPaw.12G007300 Carya illinoinensis HOM05D002031 ORTHO05D002143 9.9e-74 280.8 240 63.8
FAN11G0136 Fragaria x ananassa HOM05D002031 ORTHO05D002143 1.7e-73 280.0 235 64.3
SalBow7G1447 Salvia bowleyana HOM05D002031 ORTHO05D002143 1.7e-73 280.0 242 63.6
SalBow7G2823 Salvia bowleyana HOM05D002031 ORTHO05D002143 1.7e-73 280.0 242 63.6
TAR636G1001 Trochodendron aralioides HOM05D002031 ORTHO05D002143 2.2e-73 279.6 241 59.8
Medtr2g064840 Medicago truncatula HOM05D002031 ORTHO05D002143 6.4e-73 278.1 245 58.8
ClCG11G016260 Citrullus lanatus HOM05D002031 ORTHO05D002143 1.4e-72 276.9 240 62.1
MELO3C010552.2 Cucumis melo HOM05D002031 ORTHO05D002143 1.9e-72 276.6 240 61.7
DCAR_013807 Daucus carota HOM05D002031 ORTHO05D002143 3.2e-72 275.8 231 64.1
CsaV3_4G037980 Cucumis sativus L. HOM05D002031 ORTHO05D002143 4.2e-72 275.4 241 60.6
Ah.04g163360 Amaranthus hybridus HOM05D002031 ORTHO05D002143 1.2e-71 273.9 243 63.0
unitig_747.g21595 Utricularia gibba HOM05D002031 ORTHO05D002143 2.7e-71 272.7 230 63.5
Ciclev10018663m.g Citrus clementina HOM05D002031 ORTHO05D002143 4.6e-71 271.9 236 62.7
Solyc07g056020.3 Solanum lycopersicum HOM05D002031 ORTHO05D002143 4.6e-71 271.9 232 62.9
Aa31LG4G2620 Aethionema arabicum HOM05D002031 ORTHO05D002143 6.0e-71 271.6 239 60.3
Cc05_g10020 Coffea canephora HOM05D002031 ORTHO05D002143 1.0e-70 270.8 248 59.3
Actinidia35185 Actinidia chinensis HOM05D002031 ORTHO05D002143 3.9e-70 268.9 231 63.6
Potri.001G436300 Populus trichocarpa HOM05D002031 ORTHO05D002143 5.1e-70 268.5 238 62.2
Potri.011G140100 Populus trichocarpa HOM05D002031 ORTHO05D002143 1.5e-69 266.9 231 62.8
BraA08t35032Z Brassica rapa HOM05D002031 ORTHO05D002143 1.9e-69 266.5 235 60.0
PSO675G7806 Papaver somniferum HOM05D002031 ORTHO05D002143 1.9e-69 266.5 243 59.7
Sabra16G0290500 Salix brachista HOM05D002031 ORTHO05D002143 2.5e-69 266.2 246 61.8
Hund02299 Selenicereus undatus HOM05D002031 ORTHO05D002143 2.5e-69 266.2 240 60.8
ATR1098G041 Amborella trichopoda HOM05D002031 ORTHO05D002143 3.3e-69 265.8 240 59.6
Sed0013452 Sechium edule HOM05D002031 ORTHO05D002143 3.3e-69 265.8 237 59.1
Sc16g0003460 Simmondsia chinensis HOM05D002031 ORTHO05D002143 3.3e-69 265.8 242 59.5
BcaB07g34040 Brassica carinata HOM05D002031 ORTHO05D002143 4.3e-69 265.4 235 59.1
CARHR017800 Cardamine hirsuta HOM05D002031 ORTHO05D002143 4.3e-69 265.4 232 60.3
PSO541G0296 Papaver somniferum HOM05D002031 ORTHO05D002143 4.3e-69 265.4 238 59.7
A08p31030 Brassica napus HOM05D002031 ORTHO05D002143 5.6e-69 265.0 235 59.6
C08p17770 Brassica napus HOM05D002031 ORTHO05D002143 5.6e-69 265.0 233 59.2
BolC8t49403H Brassica oleracea HOM05D002031 ORTHO05D002143 5.6e-69 265.0 233 59.2
HanXRQChr13g0393351 Helianthus annuus HOM05D002031 ORTHO05D002143 7.3e-69 264.6 141 97.2
Sabra16G0291600 Salix brachista HOM05D002031 ORTHO05D002143 9.6e-69 264.2 246 62.2
A06p13140 Brassica napus HOM05D002031 ORTHO05D002143 1.3e-68 263.8 235 59.1
BraA06t24472Z Brassica rapa HOM05D002031 ORTHO05D002143 1.3e-68 263.8 235 59.1
Aa31LG7G2030 Aethionema arabicum HOM05D002031 ORTHO05D002143 2.1e-68 263.1 239 59.0
Sopen07g029370 Solanum pennellii HOM05D002031 ORTHO05D002143 2.1e-68 263.1 216 63.4
PGSC0003DMG400031088 Solanum tuberosum HOM05D002031 ORTHO05D002143 2.8e-68 262.7 246 58.5
AUR62041255 Chenopodium quinoa HOM05D002031 ORTHO05D002143 6.2e-68 261.5 232 61.2
BcaC05g25655 Brassica carinata HOM05D002031 ORTHO05D002143 8.1e-68 261.2 235 58.7
C05p15640 Brassica napus HOM05D002031 ORTHO05D002143 8.1e-68 261.2 235 58.7
BolC5t30271H Brassica oleracea HOM05D002031 ORTHO05D002143 8.1e-68 261.2 235 58.7
Sp1g15360 Schrenkiella parvula HOM05D002031 ORTHO05D002143 1.1e-67 260.8 232 58.6
Aqoxy1G01663 Aquilegia oxysepala HOM05D002031 ORTHO05D002143 1.4e-67 260.4 232 60.3
AUR62041928 Chenopodium quinoa HOM05D002031 ORTHO05D002143 1.4e-67 260.4 235 60.0
AL1G29460 Arabidopsis lyrata HOM05D002031 ORTHO05D002143 1.8e-67 260.0 238 58.0
Psat1g009920 Pisum sativum HOM05D002031 ORTHO05D002143 1.8e-67 260.0 240 57.1
vmacro09449 Vaccinium macrocarpon HOM05D002031 ORTHO05D002143 3.1e-67 259.2 243 59.3
MBI02_g12197_MAGBIO Magnolia biondii HOM05D002031 ORTHO05D002143 1.2e-66 257.3 236 56.8
BcaB03g13012 Brassica carinata HOM05D002031 ORTHO05D002143 2.6e-66 256.1 236 58.5
AT1G17220 Arabidopsis thaliana HOM05D002031 ORTHO05D002143 4.4e-66 255.4 238 57.1
EL10Ac4g08531 Beta vulgaris HOM05D002031 ORTHO05D002143 4.4e-66 255.4 237 59.5
Ca_03484_v3 Cicer arietinum L. HOM05D002031 ORTHO05D002143 7.6e-66 254.6 241 56.0
Migut.M00670 Erythranthe guttata HOM05D002031 ORTHO05D002143 2.9e-65 252.7 241 58.1
Lj1A805T79 Lonicera japonica HOM05D002031 ORTHO05D002143 4.2e-64 248.8 227 60.8
Carub.0001s1697 Capsella rubella HOM05D002031 ORTHO05D002143 7.1e-64 248.1 231 57.6
GSVIVG01020495001 Vitis vinifera HOM05D002031 ORTHO05D002143 1.3e-62 243.8 219 60.3
TPR.G27161 Trifolium pratense HOM05D002031 ORTHO05D002143 6.6e-62 241.5 239 54.8
CDE06G2115 Ceratophyllum demersum HOM05D002031 ORTHO05D002143 1.3e-60 237.3 230 53.5
Dinv26637 Davidia involucrata HOM05D002031 ORTHO05D002143 8.1e-60 234.6 163 71.2
Rhsim04G0032300 Rhododendron simsii HOM05D002031 ORTHO05D002143 1.4e-59 233.8 194 62.9
HPP92_016575 Vanilla planifolia HOM05D002031 ORTHO05D002143 2.4e-59 233.0 225 53.8
HPP92_011058 Vanilla planifolia HOM05D002031 ORTHO05D002143 3.1e-59 232.6 223 54.7
SGA_v2.0_scaffold73G24366 Striga asiatica HOM05D002031 ORTHO05D002143 9.9e-58 227.6 237 54.9
BcaC07g38837 Brassica carinata HOM05D002031 ORTHO05D002143 2.9e-57 226.1 236 54.2
Sabra11G0126200 Salix brachista HOM05D002031 ORTHO05D002143 1.4e-56 223.8 233 54.5
Zm00001eb286620 Zea mays HOM05D002031 ORTHO05D002143 1.9e-56 223.4 239 50.2
Zm00001eb286640 Zea mays HOM05D002031 ORTHO05D002143 1.9e-56 223.4 239 50.2
Os05g0575300 Oryza sativa ssp. japonica HOM05D002031 ORTHO05D002143 3.2e-56 222.6 224 52.7
Rhsim06G0183300 Rhododendron simsii HOM05D002031 ORTHO05D002143 5.5e-56 221.9 199 59.3
CDE03G0137 Ceratophyllum demersum HOM05D002031 ORTHO05D002143 1.1e-53 214.2 215 53.0
Lsat_1_v5_gn_5_123200 Lactuca sativa HOM05D002031 ORTHO05D002143 5.3e-51 205.3 199 56.8
vmacro12030 Vaccinium macrocarpon HOM05D002031 ORTHO05D002143 1.3e-49 200.7 237 51.1
Thhalv10006681m.g Eutrema salsugineum HOM05D002031 ORTHO05D002143 3.5e-47 192.6 233 48.5
Actinidia18813 Actinidia chinensis HOM05D002031 ORTHO05D002143 7.6e-42 174.9 117 71.8
Zm00001eb250510 Zea mays HOM05D002031 ORTHO05D002143 1.0e-41 174.5 142 59.2
Mapoly0085s0042 Marchantia polymorpha HOM05D002031 ORTHO05D002143 1.6e-39 167.2 248 44.0
SMO147G0028 Selaginella moellendorffii HOM05D002031 ORTHO05D002143 9.7e-37 157.9 197 47.2
AagrBONN_evm.TU.Sc2ySwM_344.5461 Anthoceros agrestis HOM05D002031 ORTHO05D002143 3.4e-34 149.4 213 44.6
Pp3c1_24000 Physcomitrium patens HOM05D002031 ORTHO05D002143 1.4e-30 137.5 209 40.7
SEGI_17195 Sequoiadendron giganteum HOM05D002031 ORTHO05D002143 9.1e-27 124.8 204 38.7
Cc00_g18710 Coffea canephora HOM05D002031 ORTHO05D002143 1.2e-26 124.4 104 61.5
CBR_g39246 Chara braunii HOM05D002031 ORTHO05D002143 1.0e-22 111.3 211 36.5
HanXRQChr17g0553311 Helianthus annuus HOM05D002031 ORTHO05D002143 2.6e-21 106.7 62 83.9
PRCOL_00004967 Prasinoderma coloniale HOM05D002031 ORTHO05D002143 9.7e-21 104.8 133 42.9
Cre07.g341850 Chlamydomonas reinhardtii HOM05D002031 ORTHO05D002143 1.7e-20 104.0 138 40.6
MCO07G750 Micromonas commoda HOM05D002031 ORTHO05D002143 8.2e-20 101.7 138 43.5
Cc11_g03740 Coffea canephora HOM05D002031 ORTHO05D002143 4.1e-19 99.4 104 52.9
Sabra16G0295600 Salix brachista HOM05D002031 ORTHO05D002143 7.2e-08 62.0 80 45.0
Sabra16G0294800 Salix brachista HOM05D002031 ORTHO05D002143 3.6e-07 59.7 80 43.8


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