Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr03g0093821 Helianthus annuus HOM05D005511 ORTHO05D006616 0.0e+00 1135.6 634 100.0
ECA234G2010 Erigeron canadensis HOM05D005511 ORTHO05D006616 3.2e-241 838.6 642 74.1
Lsat_1_v5_gn_4_32681 Lactuca sativa HOM05D005511 ORTHO05D006616 1.8e-228 796.2 680 71.9
Dinv37487 Davidia involucrata HOM05D005511 ORTHO05D006616 2.6e-214 749.2 710 61.4
Hma1.2p1_1470F.1_g285590 Hydrangea macrophylla HOM05D005511 ORTHO05D006616 2.3e-210 736.1 685 61.6
Actinidia31365 Actinidia chinensis HOM05D005511 ORTHO05D006616 2.8e-208 729.2 692 65.0
Dinv38802 Davidia involucrata HOM05D005511 ORTHO05D006616 6.2e-208 728.0 671 64.4
CSS0031635 Camellia sinensis var. sinensis HOM05D005511 ORTHO05D006616 5.2e-207 724.9 692 65.5
QL12p025629 Quercus lobata HOM05D005511 ORTHO05D006616 1.9e-201 706.4 697 58.2
Ciclev10014516m.g Citrus clementina HOM05D005511 ORTHO05D006616 2.6e-198 696.0 698 57.6
Cfa013295 Carpinus fangiana HOM05D005511 ORTHO05D006616 3.7e-197 692.2 701 60.6
Eucgr.H04509 Eucalyptus grandis HOM05D005511 ORTHO05D006616 8.3e-197 691.0 651 60.2
vmacro03505 Vaccinium macrocarpon HOM05D005511 ORTHO05D006616 8.3e-197 691.0 682 63.3
Rhsim04G0157200 Rhododendron simsii HOM05D005511 ORTHO05D006616 4.1e-196 688.7 666 65.2
GSVIVG01014608001 Vitis vinifera HOM05D005511 ORTHO05D006616 2.7e-195 686.0 692 60.1
MSTRG.966 Avicennia marina HOM05D005511 ORTHO05D006616 7.8e-195 684.5 649 61.3
COL.COLO4_18647 Corchorus olitorius HOM05D005511 ORTHO05D006616 7.8e-195 684.5 661 59.9
Peaxi162Scf00096g01112 Petunia axillaris HOM05D005511 ORTHO05D006616 3.9e-194 682.2 695 60.4
CAN.G841.12 Capsicum annuum HOM05D005511 ORTHO05D006616 8.6e-194 681.0 693 59.5
Lalb_Chr25g0287701 Lupinus albus HOM05D005511 ORTHO05D006616 3.3e-193 679.1 706 56.4
Nitab4.5_0001801g0060 Nicotiana tabacum HOM05D005511 ORTHO05D006616 3.3e-193 679.1 691 60.1
Phvul.001G199500 Phaseolus vulgaris HOM05D005511 ORTHO05D006616 3.3e-193 679.1 707 57.4
DCAR_027476 Daucus carota HOM05D005511 ORTHO05D006616 7.3e-193 677.9 731 58.5
Nitab4.5_0013218g0030 Nicotiana tabacum HOM05D005511 ORTHO05D006616 7.3e-193 677.9 691 60.1
TWI34G0645 Tripterygium wilfordii HOM05D005511 ORTHO05D006616 8.1e-192 674.5 701 56.8
Cc03_g10050 Coffea canephora HOM05D005511 ORTHO05D006616 2.4e-191 672.9 694 60.1
VMungo1383G1052 Vigna mungo HOM05D005511 ORTHO05D006616 2.4e-191 672.9 709 57.8
GSVIVG01029743001 Vitis vinifera HOM05D005511 ORTHO05D006616 3.1e-191 672.5 713 56.4
Glyma.17G079400 Glycine max HOM05D005511 ORTHO05D006616 3.4e-190 669.1 720 55.1
Oeu009791.1 Olea europaea HOM05D005511 ORTHO05D006616 3.4e-190 669.1 653 61.9
CAN.G423.39 Capsicum annuum HOM05D005511 ORTHO05D006616 4.4e-190 668.7 695 59.0
Glyma.12G151100 Glycine max HOM05D005511 ORTHO05D006616 1.7e-189 666.8 711 56.5
Nitab4.5_0000167g0180 Nicotiana tabacum HOM05D005511 ORTHO05D006616 4.9e-189 665.2 693 59.0
Peaxi162Scf01013g00235 Petunia axillaris HOM05D005511 ORTHO05D006616 1.9e-188 663.3 698 59.3
PGSC0003DMG400028246 Solanum tuberosum HOM05D005511 ORTHO05D006616 1.9e-188 663.3 651 61.4
TAR624G0177 Trochodendron aralioides HOM05D005511 ORTHO05D006616 1.9e-188 663.3 712 58.7
Sopen10g032680 Solanum pennellii HOM05D005511 ORTHO05D006616 4.2e-188 662.1 689 58.8
Thecc.09G000500 Theobroma cacao HOM05D005511 ORTHO05D006616 7.1e-188 661.4 682 57.5
Oeu001428.2 Olea europaea HOM05D005511 ORTHO05D006616 1.6e-187 660.2 650 60.3
Solyc10g083200.2 Solanum lycopersicum HOM05D005511 ORTHO05D006616 1.6e-187 660.2 689 58.6
Lj1g0000151 Lotus japonicus HOM05D005511 ORTHO05D006616 2.7e-187 659.4 696 57.0
Gohir.A06G108200 Gossypium hirsutum HOM05D005511 ORTHO05D006616 4.6e-187 658.7 656 59.0
Manes.03G000300 Manihot esculenta HOM05D005511 ORTHO05D006616 1.0e-186 657.5 689 61.1
Ca_09096_v3 Cicer arietinum L. HOM05D005511 ORTHO05D006616 1.3e-186 657.1 693 55.6
arahy.Tifrunner.gnm1.ann1.Q5NSRJ Arachis hypogaea HOM05D005511 ORTHO05D006616 1.7e-186 656.8 703 57.6
Duzib168G0441 Durio zibethinus HOM05D005511 ORTHO05D006616 1.1e-185 654.1 677 56.9
Medtr1g092770 Medicago truncatula HOM05D005511 ORTHO05D006616 1.5e-185 653.7 687 55.2
Gorai.010G125400 Gossypium raimondii HOM05D005511 ORTHO05D006616 1.3e-184 650.6 656 58.7
PSO541G5250 Papaver somniferum HOM05D005511 ORTHO05D006616 4.8e-184 648.7 720 58.3
TPR.G32311 Trifolium pratense HOM05D005511 ORTHO05D006616 4.8e-184 648.7 702 54.7
Sed0022409 Sechium edule HOM05D005511 ORTHO05D006616 5.3e-183 645.2 706 55.8
Cpa.g.sc81.17 Carica papaya HOM05D005511 ORTHO05D006616 1.2e-182 644.0 697 57.2
Psat5g176520 Pisum sativum HOM05D005511 ORTHO05D006616 1.5e-182 643.7 693 55.6
CiPaw.07G210700 Carya illinoinensis HOM05D005511 ORTHO05D006616 3.8e-181 639.0 686 56.1
Oeu018783.1 Olea europaea HOM05D005511 ORTHO05D006616 8.4e-181 637.9 654 58.3
CANSAT25G2351 Cannabis sativa HOM05D005511 ORTHO05D006616 5.4e-180 635.2 642 57.0
CsaV3_5G010440 Cucumis sativus L. HOM05D005511 ORTHO05D006616 1.6e-179 633.6 706 54.7
arahy.Tifrunner.gnm1.ann1.V3D0DH Arachis hypogaea HOM05D005511 ORTHO05D006616 2.7e-179 632.9 699 54.2
Potri.018G002000 Populus trichocarpa HOM05D005511 ORTHO05D006616 2.7e-179 632.9 639 59.2
TWI32G1116 Tripterygium wilfordii HOM05D005511 ORTHO05D006616 7.8e-179 631.3 706 56.1
Potri.006G279800 Populus trichocarpa HOM05D005511 ORTHO05D006616 5.6e-177 625.2 662 56.6
Aqoxy4G02032 Aquilegia oxysepala HOM05D005511 ORTHO05D006616 7.3e-177 624.8 633 59.9
AT4G31200 Arabidopsis thaliana HOM05D005511 ORTHO05D006616 9.6e-177 624.4 663 56.1
Thhalv10024645m.g Eutrema salsugineum HOM05D005511 ORTHO05D006616 1.6e-176 623.6 663 57.3
THA.LOC104819918 Tarenaya hassleriana HOM05D005511 ORTHO05D006616 8.1e-176 621.3 634 59.9
CSS0032846 Camellia sinensis var. sinensis HOM05D005511 ORTHO05D006616 1.4e-175 620.5 654 61.5
ClCG05G026390 Citrullus lanatus HOM05D005511 ORTHO05D006616 1.4e-175 620.5 702 54.4
MBI02_g34313_MAGBIO Magnolia biondii HOM05D005511 ORTHO05D006616 6.9e-175 618.2 711 60.1
AL7G20880 Arabidopsis lyrata HOM05D005511 ORTHO05D006616 9.0e-175 617.8 663 55.8
CDE07G1638 Ceratophyllum demersum HOM05D005511 ORTHO05D006616 7.6e-174 614.8 695 53.5
Aa31LG11G2310 Aethionema arabicum HOM05D005511 ORTHO05D006616 9.9e-174 614.4 666 56.9
Hund14329 Selenicereus undatus HOM05D005511 ORTHO05D006616 9.9e-174 614.4 646 58.2
Sp7g29080 Schrenkiella parvula HOM05D005511 ORTHO05D006616 8.4e-173 611.3 666 58.4
HPP92_005904 Vanilla planifolia HOM05D005511 ORTHO05D006616 1.4e-172 610.5 701 55.1
CARHR239100 Cardamine hirsuta HOM05D005511 ORTHO05D006616 3.2e-172 609.4 672 57.0
Carub.0007s0934 Capsella rubella HOM05D005511 ORTHO05D006616 2.1e-171 606.7 676 55.0
Ah.07g201420 Amaranthus hybridus HOM05D005511 ORTHO05D006616 1.3e-170 604.0 647 57.3
PGR142G1479 Punica granatum HOM05D005511 ORTHO05D006616 1.8e-170 603.6 690 55.2
Migut.H02336 Erythranthe guttata HOM05D005511 ORTHO05D006616 3.7e-168 595.9 672 59.2
EL10Ac5g11907 Beta vulgaris HOM05D005511 ORTHO05D006616 8.1e-168 594.7 690 55.1
Sabra18G0005200 Salix brachista HOM05D005511 ORTHO05D006616 2.4e-167 593.2 609 57.0
A01p07040 Brassica napus HOM05D005511 ORTHO05D006616 1.2e-166 590.9 660 54.8
MD08G1126000 Malus domestica HOM05D005511 ORTHO05D006616 1.2e-166 590.9 700 54.9
CDE06G2039 Ceratophyllum demersum HOM05D005511 ORTHO05D006616 1.5e-166 590.5 648 55.1
Prupe.1G457600 Prunus persica HOM05D005511 ORTHO05D006616 2.6e-166 589.7 568 59.0
BcaC09g51902 Brassica carinata HOM05D005511 ORTHO05D006616 1.0e-165 587.8 659 54.5
C01p07790 Brassica napus HOM05D005511 ORTHO05D006616 3.8e-165 585.9 659 54.3
Lj3A264G15 Lonicera japonica HOM05D005511 ORTHO05D006616 7.1e-164 581.6 567 61.4
Sc03g0008920 Simmondsia chinensis HOM05D005511 ORTHO05D006616 1.2e-163 580.9 665 56.5
ATR1145G079 Amborella trichopoda HOM05D005511 ORTHO05D006616 2.1e-163 580.1 663 54.4
BraA01t00656Z Brassica rapa HOM05D005511 ORTHO05D006616 1.3e-162 577.4 667 54.4
AUR62007421 Chenopodium quinoa HOM05D005511 ORTHO05D006616 3.0e-162 576.2 684 54.7
BolC1t00765H Brassica oleracea HOM05D005511 ORTHO05D006616 3.3e-161 572.8 659 53.9
MD15G1105800 Malus domestica HOM05D005511 ORTHO05D006616 2.8e-160 569.7 699 54.2
Nitab4.5_0001579g0070 Nicotiana tabacum HOM05D005511 ORTHO05D006616 8.4e-157 558.1 749 50.3
Os06g0682700 Oryza sativa ssp. japonica HOM05D005511 ORTHO05D006616 4.2e-156 555.8 545 58.9
ATR0686G209 Amborella trichopoda HOM05D005511 ORTHO05D006616 2.1e-155 553.5 664 53.5
MELO3C018377.2 Cucumis melo HOM05D005511 ORTHO05D006616 2.4e-151 540.0 527 58.4
FAN15G0681 Fragaria x ananassa HOM05D005511 ORTHO05D006616 9.0e-151 538.1 560 55.7
FvH4_2g36600 Fragaria vesca HOM05D005511 ORTHO05D006616 3.8e-149 532.7 558 55.4
SGA_v2.0_scaffold188G40311 Striga asiatica HOM05D005511 ORTHO05D006616 3.2e-148 529.6 549 60.5
RcHm_v2.0_Chr6g0305221 Rosa chinensis HOM05D005511 ORTHO05D006616 2.1e-147 526.9 531 57.1
FAN27G2128 Fragaria x ananassa HOM05D005511 ORTHO05D007122 4.4e-137 492.7 527 54.6
FAN20G1701 Fragaria x ananassa HOM05D005511 ORTHO05D007122 2.0e-134 483.8 529 54.1
unitig_32.g11169 Utricularia gibba HOM05D005511 ORTHO05D006616 9.4e-132 474.9 585 49.9
Pp3c17_14220 Physcomitrium patens HOM05D005511 ORTHO05D006616 1.5e-129 467.6 672 46.3
AUR62027311 Chenopodium quinoa HOM05D005511 ORTHO05D006616 2.0e-129 467.2 544 52.2
Nn1g03658 Nelumbo nucifera HOM05D005511 ORTHO05D006616 3.3e-129 466.5 430 66.0
Mapoly0058s0003 Marchantia polymorpha HOM05D005511 ORTHO05D006616 1.3e-125 454.5 657 47.8
Sc03g0008950 Simmondsia chinensis HOM05D005511 ORTHO05D006616 3.8e-125 453.0 466 57.5
SMO147G0244 Selaginella moellendorffii HOM05D005511 ORTHO05D006616 4.1e-103 379.8 533 43.9
Haze_21773 Corylus avellana HOM05D005511 ORTHO05D006616 2.4e-95 354.0 356 59.3
Atru.chr7.2702 Acer truncatum HOM05D005511 ORTHO05D006616 4.1e-95 353.2 356 57.9
Sabra06G0216900 Salix brachista HOM05D005511 ORTHO05D006616 7.0e-95 352.4 350 58.0
Zm00001eb273620 Zea mays HOM05D005511 ORTHO05D006616 8.6e-93 345.5 375 53.1
Atru.chr7.2703 Acer truncatum HOM05D005511 ORTHO05D006616 1.5e-89 334.7 313 60.7
CBR_g44445 Chara braunii HOM05D005511 ORTHO05D006616 1.5e-89 334.7 817 34.5
CBR_g29483 Chara braunii HOM05D000785 ORTHO05D006616 4.6e-86 323.2 795 33.0
Hma1.2p1_0379F.1_g139860 Hydrangea macrophylla HOM05D005511 ORTHO05D006616 1.3e-85 321.6 316 56.3
Haze_21772 Corylus avellana HOM05D005511 ORTHO05D006616 8.9e-82 308.9 324 57.1
SEGI_09992 Sequoiadendron giganteum HOM05D005511 ORTHO05D006616 6.6e-69 266.2 375 46.7
SHI01952 Sapria himalayana HOM05D005511 ORTHO05D006616 3.1e-66 257.3 358 46.6
Sabra06G0216800 Salix brachista HOM05D005511 ORTHO05D006616 7.6e-65 252.7 294 53.4
SHI01951 Sapria himalayana HOM05D000002 ORTHO05D000001 9.0e-58 229.2 301 49.8
unitig_748.g7741 Utricularia gibba HOM05D005511 ORTHO05D006616 1.7e-56 224.9 232 54.7
ATR0686G036 Amborella trichopoda HOM05D005511 ORTHO05D006616 1.4e-55 221.9 239 55.6
AagrBONN_evm.TU.Sc2ySwM_228.1219 Anthoceros agrestis HOM05D005511 ORTHO05D006616 1.3e-51 208.8 413 38.0
MELO3C003615.2 Cucumis melo HOM05D005511 ORTHO05D006616 8.4e-48 196.1 240 50.4
VMungo1383G0863 Vigna mungo HOM05D005511 ORTHO05D006616 1.0e-45 189.1 142 69.0
CDE06G0583 Ceratophyllum demersum HOM05D005511 ORTHO05D006616 5.7e-44 183.3 174 51.7
ATR1145G067 Amborella trichopoda HOM05D005511 ORTHO05D006616 1.0e-32 146.0 228 44.3
Actinidia34689 Actinidia chinensis HOM05D005511 ORTHO05D006616 4.2e-31 140.6 140 55.0
Nitab4.5_0000365g0090 Nicotiana tabacum HOM05D005511 ORTHO05D006616 7.9e-30 136.3 126 61.1
Psat6g134200 Pisum sativum HOM05D005511 ORTHO05D006616 4.3e-28 130.6 80 78.8
Cre04.g222300 Chlamydomonas reinhardtii HOM05D005511 ORTHO05D006616 2.6e-25 121.3 387 29.2
CANSAT21G0937 Cannabis sativa HOM05D005511 ORTHO05D006616 1.5e-20 105.5 89 62.9
PGSC0003DMG400027627 Solanum tuberosum HOM05D005511 ORTHO05D006616 4.0e-13 80.9 88 54.5
Sc03g0008960 Simmondsia chinensis HOM05D005511 ORTHO05D006616 1.1e-10 72.8 150 48.7
MCO14G468 Micromonas commoda HOM05D000251 ORTHO05D007889 9.1e-10 69.7 61 54.1
Pp3c6_280 Physcomitrium patens HOM05D000251 ORTHO05D007889 1.2e-09 69.3 55 52.7
Actinidia02692 Actinidia chinensis HOM05D005511 ORTHO05D006616 1.0e-08 66.2 88 47.7
CANSAT80G2803 Cannabis sativa HOM05D000251 ORTHO05D007889 2.7e-06 58.2 62 43.5


User provided reference genes

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