Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr03g0092801 Helianthus annuus HOM05D005453 ORTHO05D006520 1.7e-85 319.3 161 100.0
ECA234G1124 Erigeron canadensis HOM05D005453 ORTHO05D006520 1.0e-26 124.0 167 48.5
Lsat_1_v5_gn_8_53620 Lactuca sativa HOM05D005453 ORTHO05D006520 1.5e-22 110.2 173 42.8
DCAR_031056 Daucus carota HOM05D005453 ORTHO05D006520 5.7e-17 91.7 70 64.3
Dinv34193 Davidia involucrata HOM05D005453 ORTHO05D006520 8.2e-16 87.8 115 44.3
CSS0029199 Camellia sinensis var. sinensis HOM05D005453 ORTHO05D006520 1.1e-15 87.4 86 51.2
QL03p065960 Quercus lobata HOM05D005453 ORTHO05D006520 2.4e-15 86.3 106 47.2
Sed0004157 Sechium edule HOM05D005453 ORTHO05D006520 3.1e-15 85.9 69 56.5
CsaV3_5G032260 Cucumis sativus L. HOM05D005453 ORTHO05D006520 5.3e-15 85.1 113 42.5
EL10Ac6g13139 Beta vulgaris HOM05D005453 ORTHO05D006520 1.2e-14 84.0 59 59.3
TAR374G0997 Trochodendron aralioides HOM05D005453 ORTHO05D006520 1.2e-14 84.0 121 40.5
ClCG05G024670 Citrullus lanatus HOM05D005453 ORTHO05D006520 1.5e-14 83.6 118 41.5
MD13G1079900 Malus domestica HOM05D005453 ORTHO05D006520 1.5e-14 83.6 89 50.6
MD16G1079800 Malus domestica HOM05D005453 ORTHO05D006520 2.0e-14 83.2 88 54.5
Potri.010G034600 Populus trichocarpa HOM05D005453 ORTHO05D006520 2.0e-14 83.2 63 58.7
Actinidia08209 Actinidia chinensis HOM05D005453 ORTHO05D006520 3.4e-14 82.4 82 48.8
Actinidia19854 Actinidia chinensis HOM05D005453 ORTHO05D006520 4.5e-14 82.0 59 61.0
Atru.chr11.1866 Acer truncatum HOM05D005453 ORTHO05D006520 5.9e-14 81.6 67 47.8
Duzib248G1267 Durio zibethinus HOM05D005453 ORTHO05D006520 5.9e-14 81.6 68 57.4
Hma1.2p1_0265F.1_g106550 Hydrangea macrophylla HOM05D005453 ORTHO05D006520 5.9e-14 81.6 128 40.6
Hund05918 Selenicereus undatus HOM05D005453 ORTHO05D006520 5.9e-14 81.6 60 55.0
Nitab4.5_0002291g0010 Nicotiana tabacum HOM05D005453 ORTHO05D006520 1.0e-13 80.9 133 40.6
Prupe.1G266900 Prunus persica HOM05D005453 ORTHO05D006520 1.0e-13 80.9 110 45.5
Sabra10G0030200 Salix brachista HOM05D005453 ORTHO05D006520 1.3e-13 80.5 134 38.8
Ciclev10031079m.g Citrus clementina HOM05D005453 ORTHO05D006520 1.7e-13 80.1 60 58.3
HanXRQChr08g0209161 Helianthus annuus HOM05D005453 ORTHO05D006520 1.7e-13 80.1 88 43.2
Potri.008G194300 Populus trichocarpa HOM05D005453 ORTHO05D006520 1.7e-13 80.1 81 50.6
Solyc01g010460.4 Solanum lycopersicum HOM05D005453 ORTHO05D006520 1.7e-13 80.1 187 36.9
Sabra08G0147800 Salix brachista HOM05D005453 ORTHO05D006520 2.2e-13 79.7 62 59.7
PGSC0003DMG400026781 Solanum tuberosum HOM05D005453 ORTHO05D006520 2.2e-13 79.7 147 41.5
Gohir.D02G169300 Gossypium hirsutum HOM05D005453 ORTHO05D006520 2.9e-13 79.3 68 52.9
Gorai.005G189700 Gossypium raimondii HOM05D005453 ORTHO05D006520 2.9e-13 79.3 68 52.9
RcHm_v2.0_Chr4g0440791 Rosa chinensis HOM05D005453 ORTHO05D006520 2.9e-13 79.3 61 57.4
AUR62026459 Chenopodium quinoa HOM05D005453 ORTHO05D006520 3.8e-13 79.0 61 55.7
MELO3C012058.2 Cucumis melo HOM05D005453 ORTHO05D006520 3.8e-13 79.0 110 40.0
PSO478G0523 Papaver somniferum HOM05D005453 ORTHO05D006520 3.8e-13 79.0 75 50.7
Rhsim12G0129300 Rhododendron simsii HOM05D005453 ORTHO05D006520 3.8e-13 79.0 102 45.1
Haze_12074 Corylus avellana HOM05D005453 ORTHO05D006520 5.0e-13 78.6 142 41.5
Gohir.A03G146000 Gossypium hirsutum HOM05D005453 ORTHO05D006520 5.0e-13 78.6 68 52.9
PSO017G4002 Papaver somniferum HOM05D005453 ORTHO05D006520 6.5e-13 78.2 103 44.7
CANSAT64G2233 Cannabis sativa HOM05D005453 ORTHO05D006520 8.5e-13 77.8 60 61.7
Cfa009044 Carpinus fangiana HOM05D005453 ORTHO05D006520 8.5e-13 77.8 60 56.7
FAN22G2419 Fragaria x ananassa HOM05D005453 ORTHO05D006520 8.5e-13 77.8 102 44.1
Peaxi162Scf00026g02226 Petunia axillaris HOM05D005453 ORTHO05D006520 8.5e-13 77.8 66 56.1
PGR102G2554 Punica granatum HOM05D005453 ORTHO05D006520 8.5e-13 77.8 60 58.3
COL.COLO4_36184 Corchorus olitorius HOM05D005453 ORTHO05D006520 1.4e-12 77.0 78 44.9
AUR62026269 Chenopodium quinoa HOM05D005453 ORTHO05D006520 1.9e-12 76.6 61 54.1
FvH4_4g32100 Fragaria vesca HOM05D005453 ORTHO05D006520 1.9e-12 76.6 68 52.9
FAN12G1353 Fragaria x ananassa HOM05D005453 ORTHO05D006520 1.9e-12 76.6 68 52.9
Nitab4.5_0002969g0050 Nicotiana tabacum HOM05D005453 ORTHO05D006520 1.9e-12 76.6 113 43.4
Lj2g0004726 Lotus japonicus HOM05D005453 ORTHO05D006520 2.5e-12 76.3 66 53.0
Manes.01G191800 Manihot esculenta HOM05D005453 ORTHO05D006520 2.5e-12 76.3 116 40.5
Thecc.02G232200 Theobroma cacao HOM05D005453 ORTHO05D006520 2.5e-12 76.3 89 44.9
Nn4g23024 Nelumbo nucifera HOM05D005453 ORTHO05D006520 3.2e-12 75.9 156 34.6
Oeu026503.1 Olea europaea HOM05D005453 ORTHO05D006520 3.2e-12 75.9 72 52.8
Hund25276 Selenicereus undatus HOM05D005453 ORTHO05D006520 3.2e-12 75.9 59 54.2
Sopen01g006070 Solanum pennellii HOM05D005453 ORTHO05D006520 4.2e-12 75.5 151 41.1
TWI75G0114 Tripterygium wilfordii HOM05D005453 ORTHO05D006520 4.2e-12 75.5 68 51.5
Ca_07371_v3 Cicer arietinum L. HOM05D005453 ORTHO05D006520 5.5e-12 75.1 58 56.9
Nitab4.5_0002382g0040 Nicotiana tabacum HOM05D005453 ORTHO05D006520 5.5e-12 75.1 73 54.8
Psat2g125480 Pisum sativum HOM05D005453 ORTHO05D006520 5.5e-12 75.1 88 45.5
COL.COLO4_34957 Corchorus olitorius HOM05D005453 ORTHO05D006520 7.2e-12 74.7 66 50.0
Nitab4.5_0000679g0110 Nicotiana tabacum HOM05D005453 ORTHO05D006520 7.2e-12 74.7 113 43.4
Oeu057176.2 Olea europaea HOM05D005453 ORTHO05D006520 7.2e-12 74.7 78 46.2
Solyc05g006930.3 Solanum lycopersicum HOM05D005453 ORTHO05D006520 7.2e-12 74.7 127 36.2
Lalb_Chr10g0097931 Lupinus albus HOM05D005453 ORTHO05D006520 9.4e-12 74.3 61 57.4
Aqoxy3G03253 Aquilegia oxysepala HOM05D005453 ORTHO05D006520 1.6e-11 73.6 60 53.3
Nn3g17115 Nelumbo nucifera HOM05D005453 ORTHO05D006520 1.6e-11 73.6 60 56.7
THA.LOC104822093 Tarenaya hassleriana HOM05D005453 ORTHO05D006520 1.6e-11 73.6 136 36.0
TPR.G29465 Trifolium pratense HOM05D005453 ORTHO05D006520 1.6e-11 73.6 58 56.9
Duzib268G1123 Durio zibethinus HOM05D005453 ORTHO05D006520 2.1e-11 73.2 59 54.2
Sc11g0001640 Simmondsia chinensis HOM05D005453 ORTHO05D006520 2.1e-11 73.2 59 54.2
Ah.03g132040 Amaranthus hybridus HOM05D006025 ORTHO05D008547 2.7e-11 72.8 89 47.2
CAN.G827.6 Capsicum annuum HOM05D005453 ORTHO05D006520 3.6e-11 72.4 58 62.1
MSTRG.666 Avicennia marina HOM05D005453 ORTHO05D006520 4.7e-11 72.0 95 43.2
SEGI_23512 Sequoiadendron giganteum HOM05D005453 ORTHO05D006520 6.1e-11 71.6 127 35.4
AL1G38420 Arabidopsis lyrata HOM05D005453 ORTHO05D006520 1.0e-10 70.9 124 38.7
BcaB07g32384 Brassica carinata HOM05D005453 ORTHO05D006520 1.0e-10 70.9 112 38.4
CAN.G27.11 Capsicum annuum HOM05D005453 ORTHO05D006520 1.0e-10 70.9 117 38.5
Medtr5g038210 Medicago truncatula HOM05D005453 ORTHO05D006520 1.0e-10 70.9 58 51.7
Peaxi162Scf00209g00610 Petunia axillaris HOM05D005453 ORTHO05D006520 1.0e-10 70.9 178 34.3
ATR0665G247 Amborella trichopoda HOM05D005453 ORTHO05D006520 1.4e-10 70.5 140 35.0
Sed0006777 Sechium edule HOM05D005453 ORTHO05D006520 1.8e-10 70.1 56 55.4
A09p40480 Brassica napus HOM05D003373 ORTHO05D004419 2.3e-10 69.7 94 40.4
BraA09t39545Z Brassica rapa HOM05D003373 ORTHO05D006520 2.3e-10 69.7 94 40.4
Sopen05g002890 Solanum pennellii HOM05D005453 ORTHO05D006520 2.3e-10 69.7 127 33.1
Carub.0001s2390 Capsella rubella HOM05D005453 ORTHO05D006520 3.0e-10 69.3 70 42.9
Sp1g21710 Schrenkiella parvula HOM05D005453 ORTHO05D006520 3.0e-10 69.3 79 38.0
C05p23700 Brassica napus HOM05D003373 ORTHO05D004419 3.9e-10 68.9 94 40.4
BolC5t31089H Brassica oleracea HOM05D005453 ORTHO05D006520 3.9e-10 68.9 94 40.4
AT1G27070 Arabidopsis thaliana HOM05D005453 ORTHO05D006520 5.2e-10 68.6 141 35.5
Cpa.g.sc1308.1 Carica papaya HOM05D005453 ORTHO05D006520 5.2e-10 68.6 133 34.6
Migut.L01350 Erythranthe guttata HOM05D005453 ORTHO05D006520 5.2e-10 68.6 65 52.3
arahy.Tifrunner.gnm1.ann1.7H81I7 Arachis hypogaea HOM05D005453 ORTHO05D006520 8.8e-10 67.8 76 46.1
CiPaw.05G140600 Carya illinoinensis HOM05D005453 ORTHO05D006520 8.8e-10 67.8 68 48.5
CDE06G1042 Ceratophyllum demersum HOM05D005453 ORTHO05D006520 8.8e-10 67.8 67 47.8
PGSC0003DMG400017617 Solanum tuberosum HOM05D005453 ORTHO05D006520 8.8e-10 67.8 115 36.5
arahy.Tifrunner.gnm1.ann1.62035P Arachis hypogaea HOM05D005453 ORTHO05D006520 1.1e-09 67.4 76 46.1
Oeu011701.1 Olea europaea HOM05D005453 ORTHO05D006520 1.1e-09 67.4 96 43.8
SalBow2G2835 Salvia bowleyana HOM05D005453 ORTHO05D006520 1.1e-09 67.4 91 47.3
SGA_v2.0_scaffold163G38065 Striga asiatica HOM05D005453 ORTHO05D006520 1.5e-09 67.0 65 55.4
Phvul.002G067500 Phaseolus vulgaris HOM05D005453 ORTHO05D006520 2.0e-09 66.6 90 45.6
VMungo1215G2350 Vigna mungo HOM05D005453 ORTHO05D006520 2.0e-09 66.6 47 61.7
Glyma.01G041500 Glycine max HOM05D005453 ORTHO05D006520 4.4e-09 65.5 106 40.6
Mapoly0020s0141 Marchantia polymorpha HOM05D005453 ORTHO05D006520 4.4e-09 65.5 53 58.5
Thhalv10007340m.g Eutrema salsugineum HOM05D005453 ORTHO05D006520 7.4e-09 64.7 83 39.8
MBI05_g12576_MAGBIO Magnolia biondii HOM05D005453 ORTHO05D006520 7.4e-09 64.7 113 38.9
arahy.Tifrunner.gnm1.ann1.C864RN Arachis hypogaea HOM05D005453 ORTHO05D006520 9.7e-09 64.3 76 44.7
Eucgr.B03405 Eucalyptus grandis HOM05D005453 ORTHO05D006520 9.7e-09 64.3 46 58.7
vmacro16321 Vaccinium macrocarpon HOM05D005453 ORTHO05D006520 1.3e-08 63.9 75 49.3
Glyma.02G022500 Glycine max HOM05D005453 ORTHO05D006520 2.8e-08 62.8 48 52.1
HPP92_018829 Vanilla planifolia HOM05D005453 ORTHO05D006520 2.8e-08 62.8 62 46.8
Zm00001eb217200 Zea mays HOM05D005453 ORTHO05D006520 4.8e-08 62.0 50 54.0
Zm00001eb053230 Zea mays HOM05D005453 ORTHO05D006520 3.1e-07 59.3 54 50.0
SMO353G0350 Selaginella moellendorffii HOM05D005453 ORTHO05D006520 9.1e-07 57.8 40 55.0
Os03g0686900 Oryza sativa ssp. japonica HOM05D005453 ORTHO05D006520 1.6e-06 57.0 51 52.9
Aa31LG7G8080 Aethionema arabicum HOM05D005453 ORTHO05D006520 3.5e-06 55.8 48 50.0
Sc04g0008480 Simmondsia chinensis HOM05D005453 ORTHO05D006520 3.5e-06 55.8 51 45.1


User provided reference genes

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