Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr03g0066031 Helianthus annuus HOM05D005762 ORTHO05D006823 2.3e-102 375.6 191 100.0
Lsat_1_v5_gn_7_49601 Lactuca sativa HOM05D005762 ORTHO05D006823 5.4e-91 337.8 191 89.5
HanXRQChr09g0244521 Helianthus annuus HOM05D005762 ORTHO05D006823 2.1e-90 335.9 191 89.5
ECA240G2400 Erigeron canadensis HOM05D006258 ORTHO05D007961 8.1e-79 297.4 173 86.1
DCAR_014801 Daucus carota HOM05D005762 ORTHO05D006823 3.8e-68 261.9 191 71.2
TAR625G0504 Trochodendron aralioides HOM05D005762 ORTHO05D006823 1.9e-67 259.6 196 67.9
Nitab4.5_0000032g0060 Nicotiana tabacum HOM05D005762 ORTHO05D006823 1.6e-66 256.5 193 72.0
MSTRG.25456 Avicennia marina HOM05D005762 ORTHO05D006823 2.7e-66 255.8 196 71.4
Hma1.2p1_0222F.1_g093870 Hydrangea macrophylla HOM05D005762 ORTHO05D006823 6.0e-66 254.6 196 69.4
DCAR_019992 Daucus carota HOM05D005762 ORTHO05D006823 1.0e-65 253.8 191 68.1
Peaxi162Scf00765g00313 Petunia axillaris HOM05D005762 ORTHO05D006823 1.8e-65 253.1 191 70.7
Actinidia24370 Actinidia chinensis HOM05D000058 ORTHO05D000077 3.9e-65 251.9 196 68.9
Sopen04g027270 Solanum pennellii HOM05D005762 ORTHO05D006823 3.9e-65 251.9 192 70.8
Dinv42823 Davidia involucrata HOM05D005762 ORTHO05D006823 5.1e-65 251.5 192 68.2
Dinv43277 Davidia involucrata HOM05D005762 ORTHO05D006823 5.1e-65 251.5 192 68.2
PGSC0003DMG400024111 Solanum tuberosum HOM05D005762 ORTHO05D006823 5.1e-65 251.5 192 70.8
Rhsim01G0024500 Rhododendron simsii HOM05D005762 ORTHO05D006823 1.9e-64 249.6 189 70.9
Solyc04g071310.3 Solanum lycopersicum HOM05D005762 ORTHO05D006823 1.9e-64 249.6 192 70.3
SGA_v2.0_scaffold118G32537 Striga asiatica HOM05D005762 ORTHO05D006823 2.5e-64 249.2 193 68.4
Nn8g40046 Nelumbo nucifera HOM05D005762 ORTHO05D006823 7.4e-64 247.7 183 69.9
SalBow7G3475 Salvia bowleyana HOM05D005762 ORTHO05D006823 1.3e-63 246.9 193 68.9
Cc00_g06610 Coffea canephora HOM05D005762 ORTHO05D006823 6.2e-63 244.6 196 67.3
ClCG06G012630 Citrullus lanatus HOM05D005762 ORTHO05D006823 2.4e-62 242.7 192 67.7
Prupe.7G266400 Prunus persica HOM05D005762 ORTHO05D006823 5.3e-62 241.5 194 64.4
CAN.G268.6 Capsicum annuum HOM05D005762 ORTHO05D006823 2.0e-61 239.6 192 68.2
vmacro06054 Vaccinium macrocarpon HOM05D005762 ORTHO05D006823 7.6e-61 237.7 194 67.0
Gorai.008G090500 Gossypium raimondii HOM05D005762 ORTHO05D006823 9.9e-61 237.3 196 67.3
Duzib147G0575 Durio zibethinus HOM05D005762 ORTHO05D006823 1.7e-60 236.5 196 65.3
Aqoxy6G02656 Aquilegia oxysepala HOM05D005762 ORTHO05D006823 2.2e-60 236.1 197 63.5
Sed0006648 Sechium edule HOM05D005762 ORTHO05D006823 6.4e-60 234.6 192 65.6
Gohir.D12G082500 Gossypium hirsutum HOM05D005762 ORTHO05D006823 1.4e-59 233.4 195 66.7
Sed0007428 Sechium edule HOM05D005762 ORTHO05D006823 4.2e-59 231.9 191 62.8
COL.COLO4_27292 Corchorus olitorius HOM05D005762 ORTHO05D006823 7.1e-59 231.1 196 64.8
PSO761G0310 Papaver somniferum HOM05D005762 ORTHO05D006823 7.1e-59 231.1 194 68.0
GSVIVG01023684001 Vitis vinifera HOM05D005762 ORTHO05D006823 9.3e-59 230.7 194 64.9
Thecc.01G095900 Theobroma cacao HOM05D005762 ORTHO05D006823 1.6e-58 229.9 196 63.8
TWI34G1522 Tripterygium wilfordii HOM05D005762 ORTHO05D006823 1.6e-58 229.9 196 62.8
Gohir.A12G083500 Gossypium hirsutum HOM05D005762 ORTHO05D006823 2.1e-58 229.6 195 66.2
Migut.C01281 Erythranthe guttata HOM05D005762 ORTHO05D006823 3.5e-58 228.8 191 65.4
CSS0036647 Camellia sinensis var. sinensis HOM05D005762 ORTHO05D006823 4.6e-58 228.4 183 67.8
Atru.chr7.1163 Acer truncatum HOM05D005762 ORTHO05D006823 1.3e-57 226.9 194 61.3
arahy.Tifrunner.gnm1.ann1.3SV7H4 Arachis hypogaea HOM05D005762 ORTHO05D006823 1.3e-57 226.9 195 66.2
Manes.14G112900 Manihot esculenta HOM05D005762 ORTHO05D006823 1.3e-57 226.9 194 64.4
arahy.Tifrunner.gnm1.ann1.0D8FTQ Arachis hypogaea HOM05D005762 ORTHO05D006823 1.8e-57 226.5 188 67.0
MBI02_g32399_MAGBIO Magnolia biondii HOM05D005762 ORTHO05D006823 3.0e-57 225.7 199 60.8
Eucgr.C02513 Eucalyptus grandis HOM05D005762 ORTHO05D006823 5.1e-57 224.9 194 60.8
Eucgr.L01546 Eucalyptus grandis HOM05D005762 ORTHO05D006823 5.1e-57 224.9 194 60.8
MELO3C010201.2 Cucumis melo HOM05D005762 ORTHO05D006823 1.1e-56 223.8 191 63.9
Lj2g0011355 Lotus japonicus HOM05D005762 ORTHO05D006823 1.5e-56 223.4 193 64.2
unitig_0.g206 Utricularia gibba HOM05D005762 ORTHO05D006823 3.3e-56 222.2 190 63.2
TWI63G0575 Tripterygium wilfordii HOM05D005762 ORTHO05D006823 3.7e-55 218.8 196 59.7
ATR0767G248 Amborella trichopoda HOM05D005762 ORTHO05D006823 4.8e-55 218.4 197 61.4
Lalb_Chr16g0380631 Lupinus albus HOM05D005762 ORTHO05D006823 4.8e-55 218.4 197 63.5
CSS0014952 Camellia sinensis var. sinensis HOM05D005762 ORTHO05D006823 8.1e-55 217.6 191 63.9
CDE02G2562 Ceratophyllum demersum HOM05D005762 ORTHO05D006823 4.0e-54 215.3 194 60.8
Lalb_Chr05g0215351 Lupinus albus HOM05D005762 ORTHO05D006823 4.0e-54 215.3 195 63.1
HPP92_021390 Vanilla planifolia HOM05D005762 ORTHO05D006823 4.0e-54 215.3 199 60.3
CiPaw.16G107100 Carya illinoinensis HOM05D005762 ORTHO05D006823 1.5e-53 213.4 194 60.3
unitig_60.g25712 Utricularia gibba HOM05D005762 ORTHO05D006823 2.0e-53 213.0 195 59.5
PSO170G6399 Papaver somniferum HOM05D005762 ORTHO05D006823 2.6e-53 212.6 194 62.9
PSO357G0319 Papaver somniferum HOM05D005762 ORTHO05D006823 7.6e-53 211.1 194 62.4
Glyma.19G036900 Glycine max HOM05D005762 ORTHO05D006823 1.0e-52 210.7 193 62.2
Phvul.004G044600 Phaseolus vulgaris HOM05D005762 ORTHO05D006823 1.0e-52 210.7 194 60.3
SGA_v2.0_scaffold69G23111 Striga asiatica HOM05D005762 ORTHO05D006823 1.3e-52 210.3 215 58.1
CDE06G1965 Ceratophyllum demersum HOM05D005762 ORTHO05D006823 8.4e-52 207.6 194 58.2
Ciclev10009604m.g Citrus clementina HOM05D005762 ORTHO05D006823 1.1e-51 207.2 198 60.1
FvH4_1g00560 Fragaria vesca HOM05D005762 ORTHO05D006823 1.1e-51 207.2 191 60.2
Lj9A721G60 Lonicera japonica HOM05D005762 ORTHO05D006823 1.1e-51 207.2 149 74.5
QL02p094110 Quercus lobata HOM05D005762 ORTHO05D006823 2.5e-51 206.1 191 58.6
MD15G1148500 Malus domestica HOM05D005762 ORTHO05D006823 9.3e-51 204.1 196 57.7
PGR102G1062 Punica granatum HOM05D005762 ORTHO05D006823 1.2e-50 203.8 196 56.1
Haze_19144 Corylus avellana HOM05D005762 ORTHO05D006823 3.0e-49 199.1 183 60.7
FAN26G0640 Fragaria x ananassa HOM05D005762 ORTHO05D006823 3.0e-49 199.1 191 58.6
VMungo1215G2009 Vigna mungo HOM05D005762 ORTHO05D006823 3.9e-49 198.7 172 64.0
Psat1g057520 Pisum sativum HOM05D005762 ORTHO05D006823 5.1e-49 198.4 195 60.0
Medtr6g006900 Medicago truncatula HOM05D005762 ORTHO05D006823 1.1e-48 197.2 190 59.5
Os06g0171700 Oryza sativa ssp. japonica HOM05D005762 ORTHO05D006823 1.5e-48 196.8 196 55.1
Sabra18G0088700 Salix brachista HOM05D000058 ORTHO05D000077 1.5e-48 196.8 186 57.0
RcHm_v2.0_Chr2g0085191 Rosa chinensis HOM05D005762 ORTHO05D006823 2.5e-48 196.1 192 59.9
Zm00001eb215170 Zea mays HOM05D005762 ORTHO05D006823 2.5e-48 196.1 195 55.9
Zm00001eb375400 Zea mays HOM05D005762 ORTHO05D006823 2.5e-48 196.1 195 55.9
THA.LOC104814737 Tarenaya hassleriana HOM05D005762 ORTHO05D006823 3.3e-48 195.7 193 56.0
TPR.G14135 Trifolium pratense HOM05D005762 ORTHO05D006823 2.8e-47 192.6 189 57.1
Lj2g0017040 Lotus japonicus HOM05D005762 ORTHO05D006823 6.3e-47 191.4 183 60.1
Potri.018G103200 Populus trichocarpa HOM05D005762 ORTHO05D006823 1.1e-46 190.7 194 55.7
BcaB03g12662 Brassica carinata HOM05D005762 ORTHO05D006823 3.1e-46 189.1 195 55.9
Dinv41344 Davidia involucrata HOM05D005762 ORTHO05D006823 4.1e-46 188.7 150 66.0
Potri.006G180900 Populus trichocarpa HOM05D005762 ORTHO05D006823 4.1e-46 188.7 190 54.2
Ca_04188_v3 Cicer arietinum L. HOM05D005762 ORTHO05D006823 5.3e-46 188.3 189 57.1
Sp7g28690 Schrenkiella parvula HOM05D005762 ORTHO05D006823 9.0e-46 187.6 191 55.0
Sabra06G0137900 Salix brachista HOM05D005762 ORTHO05D006823 5.9e-45 184.9 194 53.1
CANSAT11G0529 Cannabis sativa HOM05D005762 ORTHO05D006823 7.6e-45 184.5 190 53.2
Os11g0473100 Oryza sativa ssp. japonica HOM05D005762 ORTHO05D006823 7.6e-45 184.5 187 54.0
SEGI_01916 Sequoiadendron giganteum HOM05D005762 ORTHO05D006823 5.0e-44 181.8 194 54.6
Cpa.g.sc199.22 Carica papaya HOM05D005762 ORTHO05D006823 4.6e-42 175.3 177 57.6
CARHR238660 Cardamine hirsuta HOM05D005762 ORTHO05D006823 1.8e-41 173.3 192 51.6
AT4G30820 Arabidopsis thaliana HOM05D005762 ORTHO05D006823 3.0e-41 172.6 196 53.6
AagrBONN_evm.TU.Sc2ySwM_344.3285 Anthoceros agrestis HOM05D005762 ORTHO05D006823 3.9e-41 172.2 187 48.7
BraA08t33867Z Brassica rapa HOM05D005762 ORTHO05D006823 2.5e-40 169.5 196 52.6
C03p88490 Brassica napus HOM05D005762 ORTHO05D006823 9.7e-40 167.5 196 52.0
Rhsim03G0259100 Rhododendron simsii HOM05D005762 ORTHO05D006823 1.3e-39 167.2 147 62.6
BcaNung02738 Brassica carinata HOM05D005762 ORTHO05D006823 1.4e-38 163.7 208 49.0
Mapoly0025s0086 Marchantia polymorpha HOM05D005762 ORTHO05D006823 1.0e-36 157.5 189 46.0
BcaC01g01136 Brassica carinata HOM05D005762 ORTHO05D006823 2.2e-36 156.4 191 50.3
A08p19060 Brassica napus HOM05D005762 ORTHO05D006823 2.9e-36 156.0 224 46.4
SHI02837 Sapria himalayana HOM05D005762 ORTHO05D006823 2.9e-36 156.0 187 51.3
Carub.0007s0975 Capsella rubella HOM05D005762 ORTHO05D006823 3.8e-36 155.6 194 50.5
Sc18g0003110 Simmondsia chinensis HOM05D005762 ORTHO05D006823 8.5e-36 154.5 149 59.1
BcaNung01558 Brassica carinata HOM05D005762 ORTHO05D006823 1.9e-35 153.3 201 45.3
C07p58230 Brassica napus HOM05D000058 ORTHO05D000077 4.2e-35 152.1 191 46.6
BolC7t46281H Brassica oleracea HOM05D000058 ORTHO05D000077 4.2e-35 152.1 191 46.6
Oeu026957.1 Olea europaea HOM05D005762 ORTHO05D006823 3.6e-34 149.1 124 64.5
A03p60360 Brassica napus HOM05D005762 ORTHO05D006823 3.9e-33 145.6 191 46.1
Pp3c7_18190 Physcomitrium patens HOM05D005762 ORTHO05D006823 5.1e-33 145.2 185 42.2
SMO356G0316 Selaginella moellendorffii HOM05D005762 ORTHO05D006823 9.1e-30 134.4 187 43.3
AUR62025367 Chenopodium quinoa HOM05D005762 ORTHO05D006823 7.7e-29 131.3 83 78.3
BraA03t15075Z Brassica rapa HOM05D005762 ORTHO05D006823 1.3e-28 130.6 168 47.0
THA.LOC104804493 Tarenaya hassleriana HOM05D005762 ORTHO05D006823 1.3e-28 130.6 140 53.6
EL10Ac8g18914 Beta vulgaris HOM05D005762 ORTHO05D006823 1.7e-28 130.2 83 78.3
AUR62028383 Chenopodium quinoa HOM05D005762 ORTHO05D006823 1.7e-28 130.2 83 77.1
vmacro13053 Vaccinium macrocarpon HOM05D005762 ORTHO05D006823 6.5e-28 128.3 74 86.5
CBR_g45648 Chara braunii HOM05D005762 ORTHO05D006823 1.9e-27 126.7 207 43.5
AL7G21310 Arabidopsis lyrata HOM05D005762 ORTHO05D006823 1.5e-24 117.1 149 51.0
Thhalv10026542m.g Eutrema salsugineum HOM05D005762 ORTHO05D006823 1.5e-24 117.1 148 50.7
Cfa020788 Carpinus fangiana HOM05D005762 ORTHO05D006823 2.8e-23 112.8 111 57.7
vmacro13054 Vaccinium macrocarpon HOM05D006258 ORTHO05D007961 6.3e-23 111.7 87 65.5
BolC3t21157H Brassica oleracea HOM05D005762 ORTHO05D006823 1.8e-22 110.2 159 46.5
SGA_v2.0_scaffold63G21769 Striga asiatica HOM05D005762 ORTHO05D006823 3.1e-22 109.4 79 73.4
Nitab4.5_0008759g0010 Nicotiana tabacum HOM05D005762 ORTHO05D006823 1.7e-20 103.6 91 60.4
Rhsim01G0060600 Rhododendron simsii HOM05D005762 ORTHO05D006823 2.9e-20 102.8 103 60.2
CBR_g3032 Chara braunii HOM05D005762 ORTHO05D006823 4.2e-19 99.0 90 60.0
Oeu064081.1 Olea europaea HOM05D005762 ORTHO05D006823 4.0e-17 92.4 60 76.7
CsaV3_1G029180 Cucumis sativus L. HOM05D005762 ORTHO05D006823 5.2e-17 92.0 79 64.6
Dinv09756 Davidia involucrata HOM05D000667 ORTHO05D002614 5.2e-17 92.0 94 51.1
PSO357G0231 Papaver somniferum HOM05D005762 ORTHO05D006823 2.8e-15 86.3 133 41.4
SMO004G0001 Selaginella moellendorffii HOM05D028982 ORTHO05D006823 6.3e-15 85.1 73 56.2
MCO02G015 Micromonas commoda HOM05D005762 ORTHO05D006823 1.3e-12 77.4 202 32.7
Actinidia26604 Actinidia chinensis HOM05D005762 ORTHO05D006823 2.2e-12 76.6 77 58.4
Aa31LG2G19570 Aethionema arabicum HOM05D005762 ORTHO05D006823 6.5e-12 75.1 90 47.8
Cre16.g672753 Chlamydomonas reinhardtii HOM05D005762 ORTHO05D006823 6.8e-09 65.1 180 28.9
MD02G1004700 Malus domestica HOM05D005762 ORTHO05D006823 1.3e-07 60.8 46 60.9


User provided reference genes

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