Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr03g0061611 Helianthus annuus HOM05D000949 ORTHO05D005036 3.8e-41 171.0 84 100.0
HPP92_003040 Vanilla planifolia HOM05D000949 ORTHO05D001276 5.6e-08 60.8 36 77.8
HanXRQChr02g0053851 Helianthus annuus HOM05D000949 ORTHO05D001276 9.6e-08 60.1 36 77.8
HanXRQChr17g0556831 Helianthus annuus HOM05D000949 ORTHO05D001276 9.6e-08 60.1 36 77.8
Aa31LG4G4050 Aethionema arabicum HOM05D000949 ORTHO05D001276 2.1e-07 58.9 36 77.8
Ah.04g150780 Amaranthus hybridus HOM05D000949 ORTHO05D001276 2.1e-07 58.9 36 75.0
Haze_18763 Corylus avellana HOM05D000949 ORTHO05D001276 2.1e-07 58.9 37 75.7
Nn2g15634 Nelumbo nucifera HOM05D000949 ORTHO05D001276 2.1e-07 58.9 36 72.2
AT1G17980 Arabidopsis thaliana HOM05D000949 ORTHO05D001276 2.8e-07 58.5 36 77.8
BcaC06g31321 Brassica carinata HOM05D000949 ORTHO05D001276 2.8e-07 58.5 36 77.8
BcaC06g34200 Brassica carinata HOM05D000949 ORTHO05D001276 2.8e-07 58.5 36 77.8
CSS0034141 Camellia sinensis var. sinensis HOM05D004313 ORTHO05D005036 2.8e-07 58.5 36 77.8
CARHR018590 Cardamine hirsuta HOM05D000949 ORTHO05D001276 3.6e-07 58.2 36 77.8
Gorai.006G193600 Gossypium raimondii HOM05D000949 ORTHO05D001276 3.6e-07 58.2 39 69.2
Aa31LG7G3030 Aethionema arabicum HOM05D000949 ORTHO05D001276 4.7e-07 57.8 36 75.0
ATR0807G011 Amborella trichopoda HOM05D000949 ORTHO05D001276 4.7e-07 57.8 36 75.0
AL1G30340 Arabidopsis lyrata HOM05D000949 ORTHO05D001276 4.7e-07 57.8 36 75.0
EL10Ac3g07265 Beta vulgaris HOM05D000949 ORTHO05D001276 4.7e-07 57.8 36 75.0
CSS0031941 Camellia sinensis var. sinensis HOM05D004313 ORTHO05D005036 4.7e-07 57.8 36 77.8
CANSAT64G0299 Cannabis sativa HOM05D000949 ORTHO05D001276 4.7e-07 57.8 36 75.0
Carub.0001s1768 Capsella rubella HOM05D000949 ORTHO05D001276 4.7e-07 57.8 36 75.0
Cpa.g.sc3.454 Carica papaya HOM05D000949 ORTHO05D001276 4.7e-07 57.8 36 75.0
Cfa019721 Carpinus fangiana HOM05D000949 ORTHO05D001276 4.7e-07 57.8 36 75.0
CiPaw.15G137900 Carya illinoinensis HOM05D000949 ORTHO05D001276 4.7e-07 57.8 36 75.0
CiPaw.15G138000 Carya illinoinensis HOM05D000949 ORTHO05D001276 4.7e-07 57.8 36 75.0
CiPaw.16G089500 Carya illinoinensis HOM05D000949 ORTHO05D001276 4.7e-07 57.8 36 75.0
AUR62018376 Chenopodium quinoa HOM05D000949 ORTHO05D001276 4.7e-07 57.8 36 75.0
ClCG04G010850 Citrullus lanatus HOM05D000949 ORTHO05D001276 4.7e-07 57.8 36 75.0
Dinv17525 Davidia involucrata HOM05D000949 ORTHO05D001276 4.7e-07 57.8 36 75.0
Thhalv10006945m.g Eutrema salsugineum HOM05D000949 ORTHO05D001276 4.7e-07 57.8 36 75.0
Lsat_1_v5_gn_8_380 Lactuca sativa HOM05D000949 ORTHO05D001276 4.7e-07 57.8 36 75.0
MBI10_g36209_MAGBIO Magnolia biondii HOM05D000949 ORTHO05D001276 4.7e-07 57.8 36 75.0
MBI10_g36213_MAGBIO Magnolia biondii HOM05D000949 ORTHO05D001276 4.7e-07 57.8 36 75.0
MD06G1222200 Malus domestica HOM05D000949 ORTHO05D001276 4.7e-07 57.8 36 75.0
MD14G1231300 Malus domestica HOM05D000949 ORTHO05D001276 4.7e-07 57.8 36 75.0
Nn7g36031 Nelumbo nucifera HOM05D000949 ORTHO05D001276 4.7e-07 57.8 36 75.0
QL10p026981 Quercus lobata HOM05D000949 ORTHO05D001276 4.7e-07 57.8 36 75.0
Hund02346 Selenicereus undatus HOM05D000949 ORTHO05D001276 4.7e-07 57.8 36 75.0
Sc04g0003320 Simmondsia chinensis HOM05D000949 ORTHO05D001276 4.7e-07 57.8 36 75.0
TAR374G1726 Trochodendron aralioides HOM05D000949 ORTHO05D001276 4.7e-07 57.8 36 75.0
CSS0043265 Camellia sinensis var. sinensis HOM05D004313 ORTHO05D005036 6.2e-07 57.4 37 73.0
AUR62030286 Chenopodium quinoa HOM05D000949 ORTHO05D001276 6.2e-07 57.4 36 75.0
unitig_699.g19482 Utricularia gibba HOM05D000949 ORTHO05D001276 6.2e-07 57.4 36 72.2
GSVIVG01008352001 Vitis vinifera HOM05D000949 ORTHO05D001276 6.2e-07 57.4 36 75.0
ECA233G4930 Erigeron canadensis HOM05D000949 ORTHO05D001276 8.1e-07 57.0 36 75.0
THA.LOC104812155 Tarenaya hassleriana HOM05D000949 ORTHO05D001276 8.1e-07 57.0 36 72.2
BcaC06g34205 Brassica carinata HOM05D000949 ORTHO05D001276 1.1e-06 56.6 36 75.0
A08p30600 Brassica napus HOM05D000949 ORTHO05D001276 1.1e-06 56.6 36 72.2
A09p60150 Brassica napus HOM05D000949 ORTHO05D001276 1.1e-06 56.6 36 72.2
C07p31690 Brassica napus HOM05D000949 ORTHO05D001276 1.1e-06 56.6 36 75.0
C08p18310 Brassica napus HOM05D000949 ORTHO05D001276 1.1e-06 56.6 36 72.2
C08p43590 Brassica napus HOM05D000949 ORTHO05D001276 1.1e-06 56.6 36 72.2
BolC7t43708H Brassica oleracea HOM05D000949 ORTHO05D001276 1.1e-06 56.6 36 75.0
BolC8t49465H Brassica oleracea HOM05D000949 ORTHO05D001276 1.1e-06 56.6 36 72.2
BolC8t51905H Brassica oleracea HOM05D000949 ORTHO05D001276 1.1e-06 56.6 36 72.2
BraA06t27327Z Brassica rapa HOM05D000949 ORTHO05D001276 1.1e-06 56.6 36 75.0
BraA08t34991Z Brassica rapa HOM05D000949 ORTHO05D001276 1.1e-06 56.6 36 72.2
BraA09t41384Z Brassica rapa HOM05D000949 ORTHO05D001276 1.1e-06 56.6 36 72.2
Eucgr.K02240 Eucalyptus grandis HOM05D000949 ORTHO05D001276 1.1e-06 56.6 36 72.2
Lj9A423G69 Lonicera japonica HOM05D000949 ORTHO05D001276 1.1e-06 56.6 36 72.2
PGR044G1346 Punica granatum HOM05D000949 ORTHO05D001276 1.1e-06 56.6 36 72.2
Sp1g16040 Schrenkiella parvula HOM05D000949 ORTHO05D001276 1.1e-06 56.6 36 72.2
Actinidia16021 Actinidia chinensis HOM05D000949 ORTHO05D001276 1.4e-06 56.2 36 72.2
arahy.Tifrunner.gnm1.ann1.594W3X Arachis hypogaea HOM05D000949 ORTHO05D001276 1.4e-06 56.2 36 72.2
arahy.Tifrunner.gnm1.ann1.8H6BM6 Arachis hypogaea HOM05D000949 ORTHO05D001276 1.4e-06 56.2 36 72.2
arahy.Tifrunner.gnm1.ann1.HKPY8E Arachis hypogaea HOM05D000949 ORTHO05D001276 1.4e-06 56.2 36 72.2
arahy.Tifrunner.gnm1.ann1.K0X5TV Arachis hypogaea HOM05D000949 ORTHO05D001276 1.4e-06 56.2 36 72.2
BcaC06g34156 Brassica carinata HOM05D000949 ORTHO05D001276 1.4e-06 56.2 36 72.2
A06p44530 Brassica napus HOM05D000949 ORTHO05D001276 1.4e-06 56.2 36 75.0
C07p32100 Brassica napus HOM05D000949 ORTHO05D001276 1.4e-06 56.2 36 72.2
CSS0028856 Camellia sinensis var. sinensis HOM05D000949 ORTHO05D001276 1.4e-06 56.2 36 72.2
Cc04_g06780 Coffea canephora HOM05D000949 ORTHO05D001276 1.4e-06 56.2 36 72.2
COL.COLO4_04946 Corchorus olitorius HOM05D000949 ORTHO05D001276 1.4e-06 56.2 36 72.2
CsaV3_1G006980 Cucumis sativus L. HOM05D000949 ORTHO05D001276 1.4e-06 56.2 36 72.2
Duzib084G0139 Durio zibethinus HOM05D000949 ORTHO05D001276 1.4e-06 56.2 36 72.2
Duzib205G0274 Durio zibethinus HOM05D000949 ORTHO05D001276 1.4e-06 56.2 36 72.2
Hma1.2p1_1612F.1_g293590 Hydrangea macrophylla HOM05D000949 ORTHO05D001276 1.4e-06 56.2 36 72.2
Hma1.2p1_1612F.1_g293600 Hydrangea macrophylla HOM05D000949 ORTHO05D001276 1.4e-06 56.2 36 72.2
Manes.01G015800 Manihot esculenta HOM05D000949 ORTHO05D001276 1.4e-06 56.2 36 72.2
Manes.05G137200 Manihot esculenta HOM05D000949 ORTHO05D001276 1.4e-06 56.2 36 72.2
Psat7g005800 Pisum sativum HOM05D000949 ORTHO05D001276 1.4e-06 56.2 36 72.2
Sed0008221 Sechium edule HOM05D000949 ORTHO05D001276 1.4e-06 56.2 36 72.2
Thecc.03G044600 Theobroma cacao HOM05D000949 ORTHO05D001276 1.4e-06 56.2 36 72.2
TAR622G0089 Trochodendron aralioides HOM05D000949 ORTHO05D001276 1.4e-06 56.2 36 72.2
Atru.chr9.927 Acer truncatum HOM05D000949 ORTHO05D001276 1.8e-06 55.8 36 72.2
CSS0041990 Camellia sinensis var. sinensis HOM05D000949 ORTHO05D001276 1.8e-06 55.8 36 72.2
CDE02G4498 Ceratophyllum demersum HOM05D000949 ORTHO05D001276 1.8e-06 55.8 36 72.2
Phvul.002G325900 Phaseolus vulgaris HOM05D000949 ORTHO05D001276 1.8e-06 55.8 36 69.4
Prupe.5G226600 Prunus persica HOM05D000949 ORTHO05D001276 1.8e-06 55.8 36 72.2
Rhsim01G0213100 Rhododendron simsii HOM05D000949 ORTHO05D001276 1.8e-06 55.8 36 69.4
Rhsim12G0087600 Rhododendron simsii HOM05D000949 ORTHO05D001276 1.8e-06 55.8 36 69.4
Sabra15G0042100 Salix brachista HOM05D000949 ORTHO05D001276 1.8e-06 55.8 38 68.4
TPR.G12777 Trifolium pratense HOM05D000949 ORTHO05D001276 1.8e-06 55.8 36 72.2
Aqoxy3G00182 Aquilegia oxysepala HOM05D000949 ORTHO05D001276 2.4e-06 55.5 36 72.2
MSTRG.13561 Avicennia marina HOM05D000949 ORTHO05D001276 2.4e-06 55.5 36 72.2
Ciclev10011139m.g Citrus clementina HOM05D000949 ORTHO05D001276 2.4e-06 55.5 36 72.2
Peaxi162Scf00205g01218 Petunia axillaris HOM05D000949 ORTHO05D001276 2.4e-06 55.5 37 67.6
Migut.E00384 Erythranthe guttata HOM05D000949 ORTHO05D001276 3.1e-06 55.1 36 69.4
Gohir.A09G176100 Gossypium hirsutum HOM05D000949 ORTHO05D001276 3.1e-06 55.1 36 69.4
Gohir.D09G171800 Gossypium hirsutum HOM05D000949 ORTHO05D001276 3.1e-06 55.1 36 69.4
vmacro01418 Vaccinium macrocarpon HOM05D000949 ORTHO05D001276 3.1e-06 55.1 36 69.4
GSVIVG01011814001 Vitis vinifera HOM05D000949 ORTHO05D001276 3.1e-06 55.1 36 69.4
CANSAT21G2389 Cannabis sativa HOM05D000949 ORTHO05D001276 4.0e-06 54.7 36 72.2
Cpa.g.sc513.3 Carica papaya HOM05D000949 ORTHO05D001276 4.0e-06 54.7 36 72.2
Ca_25464_v3 Cicer arietinum L. HOM05D000949 ORTHO05D001276 4.0e-06 54.7 36 69.4
MELO3C002115.2 Cucumis melo HOM05D000949 ORTHO05D001276 4.0e-06 54.7 36 69.4
Dinv04916 Davidia involucrata HOM05D000949 ORTHO05D001276 4.0e-06 54.7 36 69.4
Lalb_Chr16g0387271 Lupinus albus HOM05D000949 ORTHO05D001276 4.0e-06 54.7 36 69.4
PSO063G2920 Papaver somniferum HOM05D000949 ORTHO05D001276 4.0e-06 54.7 36 66.7
PSO832G2251 Papaver somniferum HOM05D000949 ORTHO05D001276 4.0e-06 54.7 36 66.7
DCAR_015155 Daucus carota HOM05D000949 ORTHO05D001276 5.2e-06 54.3 36 69.4
Oeu048381.2 Olea europaea HOM05D000949 ORTHO05D001276 5.2e-06 54.3 36 69.4
Oeu057771.2 Olea europaea HOM05D000949 ORTHO05D001276 5.2e-06 54.3 36 69.4
Potri.015G043200 Populus trichocarpa HOM05D000949 ORTHO05D001276 5.2e-06 54.3 36 69.4
TWI60G0356 Tripterygium wilfordii HOM05D000949 ORTHO05D001276 5.2e-06 54.3 36 69.4
Lj4g0008763 Lotus japonicus HOM05D000949 ORTHO05D001276 6.9e-06 53.9 37 64.9
Lj4g0024044 Lotus japonicus HOM05D000949 ORTHO05D001276 6.9e-06 53.9 36 66.7
Nitab4.5_0000350g0040 Nicotiana tabacum HOM05D000949 ORTHO05D001276 6.9e-06 53.9 36 66.7
Nitab4.5_0003886g0060 Nicotiana tabacum HOM05D000949 ORTHO05D001276 6.9e-06 53.9 36 66.7
VMungo0251G0706 Vigna mungo HOM05D000949 ORTHO05D001276 6.9e-06 53.9 36 66.7
Ca_17234_v3 Cicer arietinum L. HOM05D000949 ORTHO05D001276 9.0e-06 53.5 36 66.7
Lj4g0018329 Lotus japonicus HOM05D000949 ORTHO05D001276 9.0e-06 53.5 36 66.7
SalBow8G0853 Salvia bowleyana HOM05D000949 ORTHO05D001276 9.0e-06 53.5 36 66.7


User provided reference genes

Program Settings