Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr02g0057281 Helianthus annuus HOM05D005899 ORTHO05D007445 2.7e-177 625.2 304 100.0
ECA233G4289 Erigeron canadensis HOM05D005899 ORTHO05D007445 2.9e-131 472.2 306 75.5
Lsat_1_v5_gn_6_53000 Lactuca sativa HOM05D005899 ORTHO05D007445 4.4e-127 458.4 304 72.0
Lj7P487T33 Lonicera japonica HOM05D005899 ORTHO05D007445 2.6e-119 432.6 298 67.8
DCAR_006615 Daucus carota HOM05D005899 ORTHO05D007445 5.7e-119 431.4 302 67.9
Actinidia05763 Actinidia chinensis HOM05D005899 ORTHO05D007445 3.1e-117 425.6 301 67.1
QL03p024530 Quercus lobata HOM05D005899 ORTHO05D007445 4.1e-117 425.2 294 66.7
Dinv11553 Davidia involucrata HOM05D005899 ORTHO05D007445 1.3e-115 420.2 300 66.7
Oeu064565.1 Olea europaea HOM05D005899 ORTHO05D007445 2.2e-115 419.5 302 66.2
CiPaw.07G006200 Carya illinoinensis HOM05D005899 ORTHO05D007445 3.8e-115 418.7 293 66.6
Cfa006459 Carpinus fangiana HOM05D005899 ORTHO05D007445 1.9e-114 416.4 304 65.1
CSS0047717 Camellia sinensis var. sinensis HOM05D005899 ORTHO05D007445 7.2e-114 414.5 299 64.5
FvH4_6g03430 Fragaria vesca HOM05D005899 ORTHO05D007445 7.2e-114 414.5 294 67.0
Rhsim07G0131800 Rhododendron simsii HOM05D005899 ORTHO05D007445 1.2e-113 413.7 304 66.8
MD12G1237200 Malus domestica HOM05D005899 ORTHO05D007445 2.3e-112 409.5 304 62.8
RcHm_v2.0_Chr3g0451931 Rosa chinensis HOM05D005899 ORTHO05D007445 2.3e-112 409.5 294 65.3
vmacro14199 Vaccinium macrocarpon HOM05D005899 ORTHO05D007445 6.8e-112 407.9 318 64.2
arahy.Tifrunner.gnm1.ann1.41KAT0 Arachis hypogaea HOM05D005899 ORTHO05D007445 1.5e-111 406.8 294 64.3
Prupe.6G339900 Prunus persica HOM05D005899 ORTHO05D007445 3.4e-111 405.6 307 61.6
Ciclev10001941m.g Citrus clementina HOM05D005899 ORTHO05D007445 4.4e-111 405.2 295 64.7
FAN14G1139 Fragaria x ananassa HOM05D005899 ORTHO05D007445 5.7e-111 404.8 296 65.2
Ciclev10001942m.g Citrus clementina HOM05D005899 ORTHO05D007445 1.7e-110 403.3 297 63.6
TAR362G0589 Trochodendron aralioides HOM05D005899 ORTHO05D007445 1.7e-110 403.3 296 64.5
C05p62440 Brassica napus HOM05D005899 ORTHO05D007445 3.7e-110 402.1 297 65.0
Potri.005G050600 Populus trichocarpa HOM05D005899 ORTHO05D007445 3.7e-110 402.1 304 62.5
FAN02G1821 Fragaria x ananassa HOM05D005899 ORTHO05D007445 8.3e-110 401.0 287 65.5
Nitab4.5_0002361g0040 Nicotiana tabacum HOM05D005899 ORTHO05D007445 1.1e-109 400.6 306 63.1
BolC5t34897H Brassica oleracea HOM05D005899 ORTHO05D007445 1.4e-109 400.2 297 64.3
Medtr7g114750 Medicago truncatula HOM05D005899 ORTHO05D007445 1.8e-109 399.8 294 63.3
Migut.N00303 Erythranthe guttata HOM05D005899 ORTHO05D007445 3.1e-109 399.1 300 64.3
Sabra15G0068500 Salix brachista HOM05D005899 ORTHO05D007445 9.1e-109 397.5 303 61.7
Duzib177G0382 Durio zibethinus HOM05D005899 ORTHO05D007445 1.2e-108 397.1 294 63.3
EL10Ac4g09173 Beta vulgaris HOM05D005899 ORTHO05D007445 1.6e-108 396.7 306 61.8
BcaB03g11648 Brassica carinata HOM05D005899 ORTHO05D007445 2.0e-108 396.4 293 64.5
BraA05t22981Z Brassica rapa HOM05D005899 ORTHO05D007445 2.0e-108 396.4 297 64.3
Manes.09G155900 Manihot esculenta HOM05D005899 ORTHO05D007445 2.0e-108 396.4 301 62.5
PGSC0003DMG400022509 Solanum tuberosum HOM05D005899 ORTHO05D007445 2.7e-108 396.0 301 62.8
TPR.G6971 Trifolium pratense HOM05D005899 ORTHO05D007445 2.7e-108 396.0 300 62.0
CARHR079150 Cardamine hirsuta HOM05D005899 ORTHO05D007445 4.5e-108 395.2 299 64.2
A05p42720 Brassica napus HOM05D005899 ORTHO05D007445 5.9e-108 394.8 297 64.0
Aa31LG5G15270 Aethionema arabicum HOM05D005899 ORTHO05D007445 7.7e-108 394.4 292 64.7
Duzib128G1862 Durio zibethinus HOM05D005899 ORTHO05D007445 7.7e-108 394.4 294 62.9
SGA_v2.0_scaffold517G52669 Striga asiatica HOM05D005899 ORTHO05D007445 1.0e-107 394.0 293 64.5
Sed0018425 Sechium edule HOM05D005899 ORTHO05D007445 1.3e-107 393.7 294 64.3
CANSAT54G2589 Cannabis sativa HOM05D005899 ORTHO05D007445 1.7e-107 393.3 305 59.7
Solyc01g097800.3 Solanum lycopersicum HOM05D005899 ORTHO05D007445 1.7e-107 393.3 301 63.1
Sopen01g041400 Solanum pennellii HOM05D005899 ORTHO05D007445 2.3e-107 392.9 301 62.8
AT3G04880 Arabidopsis thaliana HOM05D005899 ORTHO05D007445 2.9e-107 392.5 300 62.7
Gorai.007G285000 Gossypium raimondii HOM05D005899 ORTHO05D007445 2.9e-107 392.5 294 62.2
VMungo0540G1799 Vigna mungo HOM05D005899 ORTHO05D007445 3.8e-107 392.1 292 63.4
AUR62000983 Chenopodium quinoa HOM05D005899 ORTHO05D007445 6.6e-107 391.3 303 61.7
Oeu044665.1 Olea europaea HOM05D005899 ORTHO05D007445 6.6e-107 391.3 308 61.7
Psat0s62g0080 Pisum sativum HOM05D005899 ORTHO05D007445 1.9e-106 389.8 294 62.2
Ca_09408_v3 Cicer arietinum L. HOM05D005899 ORTHO05D007445 3.3e-106 389.0 294 62.2
MBI01_g13083_MAGBIO Magnolia biondii HOM05D005899 ORTHO05D007445 3.3e-106 389.0 295 63.4
Thecc.05G288500 Theobroma cacao HOM05D005899 ORTHO05D007445 3.3e-106 389.0 295 62.4
Gohir.A11G255200 Gossypium hirsutum HOM05D005899 ORTHO05D007445 5.5e-106 388.3 294 61.6
Lalb_Chr15g0076871 Lupinus albus HOM05D005899 ORTHO05D007445 5.5e-106 388.3 293 61.8
PSO761G0524 Papaver somniferum HOM05D005899 ORTHO05D007445 7.2e-106 387.9 294 61.2
Gohir.D11G264900 Gossypium hirsutum HOM05D005899 ORTHO05D007445 1.2e-105 387.1 294 61.6
Glyma.19G243000 Glycine max HOM05D005899 ORTHO05D007445 1.6e-105 386.7 293 62.1
CDE05G2514 Ceratophyllum demersum HOM05D005899 ORTHO05D007445 4.7e-105 385.2 291 61.5
Phvul.006G099800 Phaseolus vulgaris HOM05D005899 ORTHO05D007445 4.7e-105 385.2 293 62.1
THA.LOC104802822 Tarenaya hassleriana HOM05D005899 ORTHO05D007445 4.7e-105 385.2 297 63.6
FAN05G2237 Fragaria x ananassa HOM05D005899 ORTHO05D007445 6.1e-105 384.8 293 62.5
TWI56G0091 Tripterygium wilfordii HOM05D005899 ORTHO05D007445 1.0e-104 384.0 305 59.7
Sc13g0006240 Simmondsia chinensis HOM05D005899 ORTHO05D007445 8.9e-104 380.9 293 64.2
Cpa.g.sc117.66 Carica papaya HOM05D005899 ORTHO05D007445 2.0e-103 379.8 298 62.1
Lj1g0012490 Lotus japonicus HOM05D005899 ORTHO05D007445 2.0e-103 379.8 292 61.6
PGR083G2155 Punica granatum HOM05D005899 ORTHO05D007445 7.5e-103 377.9 286 62.9
Sp3g03700 Schrenkiella parvula HOM05D005899 ORTHO05D007445 1.4e-101 373.6 296 62.5
Cc02_g31760 Coffea canephora HOM05D005899 ORTHO05D007445 1.8e-101 373.2 293 61.1
Eucgr.L01763 Eucalyptus grandis HOM05D005899 ORTHO05D007445 3.2e-101 372.5 293 60.1
HPP92_023141 Vanilla planifolia HOM05D005899 ORTHO05D007445 1.2e-100 370.5 288 62.8
SHI18352 Sapria himalayana HOM05D005899 ORTHO05D007445 2.7e-100 369.4 300 58.3
ATR0681G168 Amborella trichopoda HOM05D005899 ORTHO05D007445 1.3e-99 367.1 292 59.2
QL03p024564 Quercus lobata HOM05D005899 ORTHO05D007445 2.1e-97 359.8 295 60.0
SEGI_33796 Sequoiadendron giganteum HOM05D005899 ORTHO05D007445 3.6e-97 359.0 292 57.5
Cfa006460 Carpinus fangiana HOM05D005899 ORTHO05D007445 6.4e-94 348.2 281 63.0
SMO367G0143 Selaginella moellendorffii HOM05D005899 ORTHO05D007445 2.4e-93 346.3 290 57.6
CAN.G134.162 Capsicum annuum HOM05D005899 ORTHO05D007445 6.0e-92 341.7 309 56.3
Zm00001eb162780 Zea mays HOM05D005899 ORTHO05D007445 8.6e-91 337.8 298 56.0
Os01g0542000 Oryza sativa ssp. japonica HOM05D005899 ORTHO05D007445 8.0e-89 331.3 300 54.3
Sabra15G0041400 Salix brachista HOM05D005899 ORTHO05D007445 1.2e-87 327.4 303 54.1
TPR.G8897 Trifolium pratense HOM05D005899 ORTHO05D007445 7.8e-84 314.7 249 59.4
AL3G15170 Arabidopsis lyrata HOM05D005899 ORTHO05D007445 6.6e-83 311.6 229 64.2
Nn4g26305 Nelumbo nucifera HOM05D005899 ORTHO05D007445 1.6e-81 307.0 234 61.5
Atru.chr2.732 Acer truncatum HOM05D005899 ORTHO05D007445 6.8e-80 301.6 238 61.8
Atru.chr2.745 Acer truncatum HOM05D005899 ORTHO05D007445 2.0e-79 300.1 235 62.1
FAN09G0887 Fragaria x ananassa HOM05D005899 ORTHO05D007445 1.1e-77 294.3 293 52.6
Pp3c6_4500 Physcomitrium patens HOM05D005899 ORTHO05D007445 1.5e-74 283.9 417 39.3
Peaxi162Scf00404g00009 Petunia axillaris HOM05D005899 ORTHO05D007445 8.9e-72 274.6 202 65.3
Haze_04330 Corylus avellana HOM05D005899 ORTHO05D007445 1.5e-71 273.9 272 50.7
Actinidia36917 Actinidia chinensis HOM05D005899 ORTHO05D007445 1.4e-69 267.3 205 65.4
Atru.chr2.742 Acer truncatum HOM05D005899 ORTHO05D007445 2.1e-68 263.5 232 57.3
Nitab4.5_0013433g0050 Nicotiana tabacum HOM05D005899 ORTHO05D007445 1.3e-65 254.2 191 61.3
Eucgr.B01712 Eucalyptus grandis HOM05D005899 ORTHO05D007445 4.8e-65 252.3 280 47.5
Eucgr.L02099 Eucalyptus grandis HOM05D005899 ORTHO05D007445 6.2e-65 251.9 198 58.1
Eucgr.L02186 Eucalyptus grandis HOM05D005899 ORTHO05D007445 1.4e-64 250.8 292 44.9
AUR62004985 Chenopodium quinoa HOM05D005899 ORTHO05D007445 2.5e-58 229.9 254 49.2
Ah.04g162380 Amaranthus hybridus HOM05D005899 ORTHO05D007445 3.6e-57 226.1 165 60.6
unitig_744.g24569 Utricularia gibba HOM05D005899 ORTHO05D007445 1.3e-54 217.6 191 59.2
Eucgr.B01710 Eucalyptus grandis HOM05D005899 ORTHO05D007445 2.1e-52 210.3 280 43.2
BcaNung06538 Brassica carinata HOM05D005899 ORTHO05D007445 3.9e-51 206.1 160 62.5
Medtr8g098320 Medicago truncatula HOM05D005899 ORTHO05D007445 6.7e-51 205.3 169 61.5
Dinv12477 Davidia involucrata HOM05D005899 ORTHO05D007445 1.3e-49 201.1 140 64.3
AUR62004976 Chenopodium quinoa HOM05D005899 ORTHO05D007445 3.7e-49 199.5 168 59.5
Carub.0003s0407 Capsella rubella HOM05D005899 ORTHO05D007445 1.8e-48 197.2 125 68.8
Medtr7g114730 Medicago truncatula HOM05D005899 ORTHO05D007445 2.5e-45 186.8 160 56.9
Sabra15G0057000 Salix brachista HOM05D005899 ORTHO05D007445 3.0e-43 179.9 146 54.8
Sabra15G0068600 Salix brachista HOM05D005899 ORTHO05D007445 3.0e-43 179.9 146 54.8
Sabra15G0056900 Salix brachista HOM05D005899 ORTHO05D007445 1.1e-42 177.9 127 59.1
FAN05G4786 Fragaria x ananassa HOM05D005899 ORTHO05D007445 1.5e-39 167.5 102 71.6
SGA_v2.0_scaffold31G12627 Striga asiatica HOM05D005899 ORTHO05D007445 2.9e-38 163.3 127 56.7
FAN05G4109 Fragaria x ananassa HOM05D005899 ORTHO05D007445 6.5e-38 162.2 147 57.1
TPR.G21843 Trifolium pratense HOM05D005899 ORTHO05D007445 3.5e-36 156.4 123 65.9
Cfa006462 Carpinus fangiana HOM05D005899 ORTHO05D007445 1.4e-32 144.4 128 53.1
Carub.0003s0408 Capsella rubella HOM05D005899 ORTHO05D007445 4.6e-28 129.4 98 64.3
AUR62000980 Chenopodium quinoa HOM05D005899 ORTHO05D007445 1.7e-22 110.9 84 66.7
TAR140G0002 Trochodendron aralioides HOM05D005899 ORTHO05D007445 2.7e-20 103.6 101 52.5
TAR623G1042 Trochodendron aralioides HOM05D005899 ORTHO05D007445 2.7e-20 103.6 101 52.5
TAR375G0990 Trochodendron aralioides HOM05D005899 ORTHO05D007445 1.0e-19 101.7 99 53.5
TAR636G1090 Trochodendron aralioides HOM05D005899 ORTHO05D007445 3.9e-19 99.8 101 50.5
RcHm_v2.0_Chr7g0217791 Rosa chinensis HOM05D005899 ORTHO05D007445 1.3e-17 94.7 142 39.4
TAR625G0400 Trochodendron aralioides HOM05D005899 ORTHO05D007445 1.8e-16 90.9 86 54.7
unitig_21.g20175 Utricularia gibba HOM05D005899 ORTHO05D007445 5.3e-16 89.4 77 53.2
PRCOL_00001982 Prasinoderma coloniale HOM05D005899 ORTHO05D007445 1.7e-14 84.3 174 32.2
TAR365G0745 Trochodendron aralioides HOM05D005899 ORTHO05D007445 3.7e-09 66.6 56 58.9
TAR375G0306 Trochodendron aralioides HOM05D005899 ORTHO05D007445 4.8e-09 66.2 58 60.3


User provided reference genes

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