Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr02g0056721 Helianthus annuus HOM05D004119 ORTHO05D004797 0.0e+00 1214.9 602 100.0
Lsat_1_v5_gn_6_49801 Lactuca sativa HOM05D004119 ORTHO05D004797 8.8e-297 1023.1 604 84.1
ECA233G2530 Erigeron canadensis HOM05D004119 ORTHO05D004797 1.6e-290 1002.3 537 89.4
HanXRQChr13g0404241 Helianthus annuus HOM05D004119 ORTHO05D004797 7.5e-288 993.4 605 81.5
Dinv36315 Davidia involucrata HOM05D004119 ORTHO05D004797 5.3e-286 987.3 584 81.8
GSVIVG01025352001 Vitis vinifera HOM05D004119 ORTHO05D004797 5.9e-285 983.8 545 85.5
DCAR_002029 Daucus carota HOM05D004119 ORTHO05D004797 1.1e-283 979.5 554 84.1
CANSAT54G1702 Cannabis sativa HOM05D004119 ORTHO05D004797 1.5e-283 979.2 547 84.3
MD03G1018700 Malus domestica HOM05D004119 ORTHO05D004797 6.1e-282 973.8 562 82.9
Aqoxy2G00086 Aquilegia oxysepala HOM05D004119 ORTHO05D004797 8.0e-282 973.4 615 78.0
Cc01_g03810 Coffea canephora HOM05D004119 ORTHO05D004797 1.0e-281 973.0 554 83.4
Atru.chr3.2433 Acer truncatum HOM05D004119 ORTHO05D004797 4.0e-281 971.1 581 80.7
PGR119G0026 Punica granatum HOM05D004119 ORTHO05D004797 4.0e-281 971.1 573 81.0
Atru.chr3.2434 Acer truncatum HOM05D004119 ORTHO05D004797 6.8e-281 970.3 581 80.6
CiPaw.14G126500 Carya illinoinensis HOM05D004119 ORTHO05D004797 2.6e-280 968.4 582 80.4
Prupe.6G017800 Prunus persica HOM05D004119 ORTHO05D004797 2.6e-280 968.4 550 83.5
QL01p009105 Quercus lobata HOM05D004119 ORTHO05D004797 1.3e-279 966.1 545 83.7
CSS0046641 Camellia sinensis var. sinensis HOM05D004119 ORTHO05D004797 3.7e-279 964.5 584 81.0
MD11G1020700 Malus domestica HOM05D004119 ORTHO05D004797 4.8e-279 964.1 542 84.5
ClCG03G013650 Citrullus lanatus HOM05D004119 ORTHO05D004797 1.4e-278 962.6 573 80.5
RcHm_v2.0_Chr5g0079321 Rosa chinensis HOM05D004119 ORTHO05D004797 1.4e-278 962.6 546 83.7
Potri.001G013900 Populus trichocarpa HOM05D004119 ORTHO05D004797 1.8e-278 962.2 596 77.7
Eucgr.B02600 Eucalyptus grandis HOM05D004119 ORTHO05D004797 2.4e-278 961.8 576 79.9
FAN25G0197 Fragaria x ananassa HOM05D004119 ORTHO05D004797 4.1e-278 961.1 597 78.7
CsaV3_1G042400 Cucumis sativus L. HOM05D004119 ORTHO05D004797 5.4e-278 960.7 609 76.5
Manes.14G015300 Manihot esculenta HOM05D004119 ORTHO05D004797 5.4e-278 960.7 573 80.1
FvH4_3g43840 Fragaria vesca HOM05D004119 ORTHO05D004797 9.1e-278 959.9 631 75.8
FAN11G1732 Fragaria x ananassa HOM05D004119 ORTHO05D004797 9.1e-278 959.9 603 78.4
CAN.G649.14 Capsicum annuum HOM05D004119 ORTHO05D004797 1.2e-277 959.5 545 83.7
Cpa.g.sc117.3 Carica papaya HOM05D004119 ORTHO05D004797 1.2e-277 959.5 547 83.0
Nn2g15648 Nelumbo nucifera HOM05D004119 ORTHO05D004797 1.2e-277 959.5 545 82.8
MELO3C015675.2 Cucumis melo HOM05D004119 ORTHO05D004797 1.6e-277 959.1 610 76.7
Peaxi162Scf00403g00212 Petunia axillaris HOM05D004119 ORTHO05D004797 2.0e-277 958.7 591 77.7
HanXRQChr11g0345481 Helianthus annuus HOM05D004119 ORTHO05D004797 3.5e-277 958.0 576 80.9
Sabra01G0010200 Salix brachista HOM05D004119 ORTHO05D004797 4.5e-277 957.6 588 78.4
Sopen01g002470 Solanum pennellii HOM05D004119 ORTHO05D004797 5.9e-277 957.2 545 83.7
TWI60G0817 Tripterygium wilfordii HOM05D004119 ORTHO05D004797 7.7e-277 956.8 573 80.3
Oeu043306.1 Olea europaea HOM05D004119 ORTHO05D004797 2.3e-276 955.3 547 83.0
Hma1.2p1_1169F.1_g263240 Hydrangea macrophylla HOM05D004119 ORTHO05D004797 2.9e-276 954.9 579 79.6
PGSC0003DMG400032205 Solanum tuberosum HOM05D004119 ORTHO05D004797 2.9e-276 954.9 545 83.9
Thecc.09G219300 Theobroma cacao HOM05D004119 ORTHO05D004797 3.8e-276 954.5 554 81.4
Nitab4.5_0001568g0150 Nicotiana tabacum HOM05D004119 ORTHO05D004797 1.1e-275 953.0 581 79.2
Duzib168G2002 Durio zibethinus HOM05D004119 ORTHO05D004797 5.5e-275 950.7 547 81.5
Ciclev10014571m.g Citrus clementina HOM05D004119 ORTHO05D004797 7.2e-275 950.3 593 77.9
Phvul.007G003400 Phaseolus vulgaris HOM05D004119 ORTHO05D004797 7.2e-275 950.3 602 76.7
TWI32G0563 Tripterygium wilfordii HOM05D004119 ORTHO05D004797 7.2e-275 950.3 573 79.6
CiPaw.13G168300 Carya illinoinensis HOM05D004119 ORTHO05D004797 1.2e-274 949.5 547 82.3
Gohir.A08G012900 Gossypium hirsutum HOM05D004119 ORTHO05D004797 1.2e-274 949.5 546 82.4
PSO339G4050 Papaver somniferum HOM05D004119 ORTHO05D004797 1.2e-274 949.5 576 78.5
PSO384G1641 Papaver somniferum HOM05D004119 ORTHO05D004797 1.2e-274 949.5 584 78.1
Medtr1g116875 Medicago truncatula HOM05D004119 ORTHO05D004797 1.6e-274 949.1 547 81.9
Solyc01g006490.4 Solanum lycopersicum HOM05D004119 ORTHO05D004797 2.1e-274 948.7 587 78.9
Gohir.D08G023300 Gossypium hirsutum HOM05D004119 ORTHO05D004797 3.6e-274 948.0 546 82.4
Gorai.004G018600 Gossypium raimondii HOM05D004119 ORTHO05D004797 3.6e-274 948.0 546 82.2
SalBow2G0171 Salvia bowleyana HOM05D004119 ORTHO05D004797 4.7e-274 947.6 582 77.5
COL.COLO4_10388 Corchorus olitorius HOM05D004119 ORTHO05D004797 6.1e-274 947.2 582 78.5
VMungo0720G1960 Vigna mungo HOM05D004119 ORTHO05D004797 8.0e-274 946.8 598 76.4
ECA248G2677 Erigeron canadensis HOM05D004119 ORTHO05D004797 1.8e-273 945.7 546 81.9
Lj5g0022671 Lotus japonicus HOM05D004119 ORTHO05D004797 3.0e-273 944.9 546 81.0
ATR0605G198 Amborella trichopoda HOM05D004119 ORTHO05D004797 5.2e-273 944.1 548 81.6
Peaxi162Scf00062g01417 Petunia axillaris HOM05D004119 ORTHO05D004797 5.2e-273 944.1 601 76.7
Lalb_Chr21g0307631 Lupinus albus HOM05D004119 ORTHO05D004797 6.8e-273 943.7 610 75.6
Nitab4.5_0004389g0050 Nicotiana tabacum HOM05D004119 ORTHO05D004797 1.5e-272 942.6 594 76.6
AUR62019225 Chenopodium quinoa HOM05D004119 ORTHO05D004797 4.4e-272 941.0 574 77.9
Lalb_Chr02g0144391 Lupinus albus HOM05D004119 ORTHO05D004797 5.7e-272 940.6 615 75.4
AUR62000053 Chenopodium quinoa HOM05D004119 ORTHO05D004797 7.5e-272 940.3 574 78.4
Haze_23030 Corylus avellana HOM05D004119 ORTHO05D004797 9.8e-272 939.9 629 73.9
Glyma.20G246800 Glycine max HOM05D004119 ORTHO05D004797 1.7e-271 939.1 545 80.6
SGA_v2.0_scaffold3G01554 Striga asiatica HOM05D004119 ORTHO05D004797 2.2e-271 938.7 624 73.9
Oeu055814.1 Olea europaea HOM05D004119 ORTHO05D004797 2.8e-271 938.3 577 78.7
Psat6g242880 Pisum sativum HOM05D004119 ORTHO05D004797 1.1e-270 936.4 545 81.5
Thhalv10012956m.g Eutrema salsugineum HOM05D004119 ORTHO05D004797 1.4e-270 936.0 588 76.7
Migut.N02286 Erythranthe guttata HOM05D004119 ORTHO05D004797 2.4e-270 935.3 555 78.4
Sp6g30940 Schrenkiella parvula HOM05D004119 ORTHO05D004797 2.4e-270 935.3 600 75.7
MSTRG.12487 Avicennia marina HOM05D004119 ORTHO05D004797 3.2e-270 934.9 577 76.9
AL6G23620 Arabidopsis lyrata HOM05D004119 ORTHO05D004797 4.1e-270 934.5 547 79.3
Ca_11408_v3 Cicer arietinum L. HOM05D004119 ORTHO05D004797 4.1e-270 934.5 573 78.7
THA.LOC104811125 Tarenaya hassleriana HOM05D004119 ORTHO05D004797 4.1e-270 934.5 547 80.3
Carub.0006s1120 Capsella rubella HOM05D004119 ORTHO05D004797 5.4e-270 934.1 547 79.2
Sed0015121 Sechium edule HOM05D004119 ORTHO05D004797 5.4e-270 934.1 573 77.8
Gohir.D05G069700 Gossypium hirsutum HOM05D004119 ORTHO05D004797 1.2e-269 932.9 547 80.8
BraA10t44578Z Brassica rapa HOM05D004119 ORTHO05D004797 7.8e-269 930.2 548 79.6
A10p25160 Brassica napus HOM05D004119 ORTHO05D004797 1.3e-268 929.5 548 79.6
AT5G13030 Arabidopsis thaliana HOM05D004119 ORTHO05D004797 1.7e-268 929.1 547 79.0
vmacro12703 Vaccinium macrocarpon HOM05D004119 ORTHO05D004797 2.3e-268 928.7 528 83.1
Gohir.A05G066800 Gossypium hirsutum HOM05D004119 ORTHO05D004797 5.0e-268 927.5 547 80.4
FAN21G0229 Fragaria x ananassa HOM05D004119 ORTHO05D004797 8.6e-268 926.8 599 76.3
MSTRG.18400 Avicennia marina HOM05D004119 ORTHO05D004797 1.1e-267 926.4 573 76.8
Nitab4.5_0001146g0130 Nicotiana tabacum HOM05D004119 ORTHO05D004797 1.5e-267 926.0 581 78.1
Os06g0320700 Oryza sativa ssp. japonica HOM05D004119 ORTHO05D004797 1.9e-267 925.6 543 80.5
Gorai.009G070700 Gossypium raimondii HOM05D004119 ORTHO05D004797 2.5e-267 925.2 547 80.3
Sed0006721 Sechium edule HOM05D004119 ORTHO05D004797 2.5e-267 925.2 546 80.0
Aa31LG3G14630 Aethionema arabicum HOM05D004119 ORTHO05D004797 4.3e-267 924.5 587 75.1
C09p64070 Brassica napus HOM05D004119 ORTHO05D004797 1.6e-266 922.5 604 74.0
CARHR200430 Cardamine hirsuta HOM05D004119 ORTHO05D004797 4.7e-266 921.0 615 72.0
TPR.G8893 Trifolium pratense HOM05D004119 ORTHO05D004797 8.0e-266 920.2 531 81.9
BolC9t59244H Brassica oleracea HOM05D004119 ORTHO05D004797 2.3e-265 918.7 604 73.8
Lj1C433G5 Lonicera japonica HOM05D004119 ORTHO05D004797 8.9e-265 916.8 583 78.2
Solyc12g100200.2 Solanum lycopersicum HOM05D004119 ORTHO05D004797 1.3e-263 912.9 594 75.1
CAN.G575.41 Capsicum annuum HOM05D004119 ORTHO05D004797 5.4e-262 907.5 583 75.3
Sopen12g034830 Solanum pennellii HOM05D004119 ORTHO05D004797 1.2e-261 906.4 594 74.7
A03p05770 Brassica napus HOM05D004119 ORTHO05D004797 4.6e-261 904.4 551 78.4
HPP92_018953 Vanilla planifolia HOM05D004119 ORTHO05D004797 4.6e-261 904.4 545 78.2
BraA03t09916Z Brassica rapa HOM05D004119 ORTHO05D004797 1.0e-260 903.3 551 78.2
Rhsim01G0187100 Rhododendron simsii HOM05D004119 ORTHO05D004797 1.0e-260 903.3 670 67.8
BolC3t13178H Brassica oleracea HOM05D004119 ORTHO05D004797 2.3e-260 902.1 613 73.2
C03p06720 Brassica napus HOM05D004119 ORTHO05D004797 1.5e-259 899.4 586 74.9
Lsat_1_v5_gn_1_68000 Lactuca sativa HOM05D004119 ORTHO05D004797 1.1e-257 893.3 552 79.0
CDE04G3728 Ceratophyllum demersum HOM05D004119 ORTHO05D004797 1.4e-254 882.9 532 78.2
BcaB01g05381 Brassica carinata HOM05D004119 ORTHO05D004797 3.1e-249 865.1 585 72.3
SEGI_31462 Sequoiadendron giganteum HOM05D004119 ORTHO05D004797 7.6e-248 860.5 554 74.0
Lj2C671G7 Lonicera japonica HOM05D004119 ORTHO05D004797 1.2e-245 853.2 574 73.2
Actinidia06316 Actinidia chinensis HOM05D004119 ORTHO05D004797 3.9e-236 821.6 571 70.9
Pp3c9_22190 Physcomitrium patens HOM05D004119 ORTHO05D004797 2.5e-235 818.9 547 71.1
Hund21812 Selenicereus undatus HOM05D004119 ORTHO05D004797 5.3e-233 811.2 490 78.4
unitig_22.g6210 Utricularia gibba HOM05D004119 ORTHO05D004797 9.9e-232 807.0 517 74.9
Lj1A436T13 Lonicera japonica HOM05D004119 ORTHO05D004797 4.2e-230 801.6 448 85.9
Mapoly0063s0012 Marchantia polymorpha HOM05D004119 ORTHO05D004797 1.6e-229 799.7 548 69.0
MBI04_g46409_MAGBIO Magnolia biondii HOM05D004119 ORTHO05D004797 2.3e-228 795.8 537 73.0
Sc16g0011910 Simmondsia chinensis HOM05D004119 ORTHO05D004797 8.7e-228 793.9 448 83.9
FAN16G3698 Fragaria x ananassa HOM05D004119 ORTHO05D004797 9.0e-225 783.9 439 85.0
AagrBONN_evm.TU.Sc2ySwM_344.3798 Anthoceros agrestis HOM05D004119 ORTHO05D004797 1.3e-223 780.0 549 68.7
SMO134G0253 Selaginella moellendorffii HOM05D004119 ORTHO05D004797 1.9e-203 713.0 515 66.8
TAR623G1465 Trochodendron aralioides HOM05D004119 ORTHO05D004797 1.2e-192 677.2 524 66.6
SEGI_38661 Sequoiadendron giganteum HOM05D004119 ORTHO05D004797 6.5e-191 671.4 451 72.1
CBR_g38091 Chara braunii HOM05D004119 ORTHO05D004797 5.1e-188 661.8 538 59.5
Zm00001eb381770 Zea mays HOM05D004119 ORTHO05D004797 2.1e-173 613.2 361 80.6
PGR119G0420 Punica granatum HOM05D004119 ORTHO05D004797 3.7e-162 575.9 344 79.7
Nn7g36025 Nelumbo nucifera HOM05D004119 ORTHO05D004797 6.6e-159 565.1 565 55.8
Cre16.g648900 Chlamydomonas reinhardtii HOM05D004119 ORTHO05D004797 4.0e-148 529.3 560 49.6
EL10Ac4g10322 Beta vulgaris HOM05D004119 ORTHO05D004797 2.3e-143 513.5 303 79.9
Oeu024459.1 Olea europaea HOM05D004119 ORTHO05D004797 7.3e-142 508.4 417 62.6
Dinv08059 Davidia involucrata HOM05D004119 ORTHO05D004797 1.5e-139 500.7 524 53.4
arahy.Tifrunner.gnm1.ann1.ZPWD91 Arachis hypogaea HOM05D004119 ORTHO05D004797 6.4e-138 495.4 280 83.2
CSS0049397 Camellia sinensis var. sinensis HOM05D004119 ORTHO05D004797 4.6e-136 489.2 278 84.2
arahy.Tifrunner.gnm1.ann1.J6MIXF Arachis hypogaea HOM05D004119 ORTHO05D004797 2.3e-127 460.3 323 71.5
PRCOL_00001378 Prasinoderma coloniale HOM05D004119 ORTHO05D004797 1.9e-113 414.1 576 42.2
Psat3g017080 Pisum sativum HOM05D004119 ORTHO05D004797 1.1e-108 398.3 288 66.7
Cre02.g108250 Chlamydomonas reinhardtii HOM05D004119 ORTHO05D004797 6.5e-98 362.5 656 36.6
RcHm_v2.0_Chr5g0079021 Rosa chinensis HOM05D004119 ORTHO05D004797 1.3e-90 338.2 184 85.3
FvH4_3g45150 Fragaria vesca HOM05D004119 ORTHO05D004797 2.7e-88 330.5 263 66.2
Cfa025573 Carpinus fangiana HOM05D004119 ORTHO05D004797 4.1e-84 316.6 622 36.2
RcHm_v2.0_Chr5g0079011 Rosa chinensis HOM05D004119 ORTHO05D004797 5.0e-82 309.7 179 83.8
TAR369G0071 Trochodendron aralioides HOM05D004119 ORTHO05D004797 9.4e-81 305.4 179 82.1
Glyma.10G296266 Glycine max HOM05D004119 ORTHO05D004797 7.9e-80 302.4 188 73.4
Pp3s34_210 Physcomitrium patens HOM05D000198 ORTHO05D004797 8.8e-79 298.9 531 36.3
Lj1P432T25 Lonicera japonica HOM05D004119 ORTHO05D004797 4.5e-75 286.6 167 81.4
PRCOL_00005150 Prasinoderma coloniale HOM05D004119 ORTHO05D004797 4.5e-75 286.6 587 34.1
MCO09G196 Micromonas commoda HOM05D004119 ORTHO05D004797 2.0e-67 261.2 609 32.5
TAR369G0199 Trochodendron aralioides HOM05D004119 ORTHO05D004797 6.1e-64 249.6 140 82.9
Actinidia39374 Actinidia chinensis HOM05D004119 ORTHO05D004797 4.0e-63 246.9 322 45.7
Psat3g137640 Pisum sativum HOM05D004119 ORTHO05D004797 1.7e-61 241.5 159 71.1
PRCOL_00005494 Prasinoderma coloniale HOM05D004119 ORTHO05D004797 4.7e-56 223.4 600 30.0
MD11G1020000 Malus domestica HOM05D004119 ORTHO05D004797 2.1e-48 198.0 120 80.8
TAR362G0095 Trochodendron aralioides HOM05D004119 ORTHO05D004797 2.8e-48 197.6 117 78.6
Manes.06G169401 Manihot esculenta HOM05D004119 ORTHO05D004797 7.0e-44 183.0 107 78.5
Ca_11410_v3 Cicer arietinum L. HOM05D004698 ORTHO05D005699 1.7e-42 178.3 100 84.0
VMungo0720G3038 Vigna mungo HOM05D004119 ORTHO05D004797 1.4e-39 168.7 155 56.1
TAR362G1239 Trochodendron aralioides HOM05D004119 ORTHO05D004797 1.6e-35 155.2 113 68.1
TPR.G14880 Trifolium pratense HOM05D004119 ORTHO05D004797 8.9e-31 139.4 77 80.5
Lsat_1_v5_gn_4_11801 Lactuca sativa HOM05D004119 ORTHO05D004797 2.2e-29 134.8 137 55.5
MBI04_g37845_MAGBIO Magnolia biondii HOM05D004119 ORTHO05D004797 5.4e-28 130.2 65 90.8
TAR369G0705 Trochodendron aralioides HOM05D004119 ORTHO05D004797 2.3e-26 124.8 100 65.0
Hund21661 Selenicereus undatus HOM05D002401 ORTHO05D007109 3.0e-26 124.4 67 83.6
Lj1A436G11 Lonicera japonica HOM05D004119 ORTHO05D004797 1.5e-22 112.1 97 58.8
RcHm_v2.0_Chr5g0079031 Rosa chinensis HOM05D004119 ORTHO05D004797 2.9e-21 107.8 64 79.7
TAR633G0263 Trochodendron aralioides HOM05D004119 ORTHO05D004797 1.2e-11 75.9 54 72.2
TPR.G25082 Trifolium pratense HOM05D004119 ORTHO05D004797 1.5e-09 68.9 120 40.0
HanXRQChr13g0426091 Helianthus annuus HOM05D004119 ORTHO05D004797 9.6e-09 66.2 38 78.9


User provided reference genes

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