Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr02g0049591 Helianthus annuus HOM05D007062 ORTHO05D008941 2.7e-108 396.0 308 100.0
Lsat_1_v5_gn_6_2361 Lactuca sativa HOM05D007062 ORTHO05D008941 4.2e-69 265.8 308 74.4
TAR375G0275 Trochodendron aralioides HOM05D007062 ORTHO05D008941 5.5e-61 238.8 310 70.0
Nitab4.5_0000993g0090 Nicotiana tabacum HOM05D007062 ORTHO05D008941 7.2e-61 238.4 309 68.9
ECA232G1654 Erigeron canadensis HOM05D007062 ORTHO05D008941 6.1e-60 235.3 211 89.1
VMungo1215G0274 Vigna mungo HOM05D007062 ORTHO05D008941 6.1e-60 235.3 309 69.6
CSS0040813 Camellia sinensis var. sinensis HOM05D007062 ORTHO05D008941 1.0e-59 234.6 311 69.5
Nitab4.5_0005649g0010 Nicotiana tabacum HOM05D007062 ORTHO05D008941 1.8e-59 233.8 309 68.3
Glyma.11G030700 Glycine max HOM05D007062 ORTHO05D008941 2.3e-59 233.4 308 69.5
CAN.G1217.21 Capsicum annuum HOM05D007062 ORTHO05D008941 5.2e-59 232.3 308 66.6
arahy.Tifrunner.gnm1.ann1.06MV4V Arachis hypogaea HOM05D007062 ORTHO05D008941 8.8e-59 231.5 209 90.4
arahy.Tifrunner.gnm1.ann1.FU46H2 Arachis hypogaea HOM05D007062 ORTHO05D008941 8.8e-59 231.5 209 90.4
CSS0025302 Camellia sinensis var. sinensis HOM05D007062 ORTHO05D008941 1.1e-58 231.1 317 68.5
Lalb_Chr16g0379721 Lupinus albus HOM05D007062 ORTHO05D008941 1.5e-58 230.7 209 90.0
Peaxi162Scf00002g00075 Petunia axillaris HOM05D007062 ORTHO05D008941 1.5e-58 230.7 308 66.6
Actinidia02105 Actinidia chinensis HOM05D007062 ORTHO05D008941 2.6e-58 229.9 310 71.6
Phvul.002G061100 Phaseolus vulgaris HOM05D007062 ORTHO05D008941 3.3e-58 229.6 308 68.5
GSVIVG01001267001 Vitis vinifera HOM05D007062 ORTHO05D008941 4.4e-58 229.2 209 91.4
Sopen08g027570 Solanum pennellii HOM05D007062 ORTHO05D008941 2.2e-57 226.9 308 68.8
Atru.chr9.1388 Acer truncatum HOM05D007062 ORTHO05D008941 2.8e-57 226.5 209 89.0
Solyc08g079110.4 Solanum lycopersicum HOM05D007062 ORTHO05D008941 4.8e-57 225.7 308 68.2
TWI60G0310 Tripterygium wilfordii HOM05D007062 ORTHO05D008941 4.8e-57 225.7 209 89.0
PGSC0003DMG400004788 Solanum tuberosum HOM05D007062 ORTHO05D008941 6.3e-57 225.3 308 66.9
TPR.G25898 Trifolium pratense HOM05D007062 ORTHO05D008941 6.3e-57 225.3 312 69.2
Prupe.5G075900 Prunus persica HOM05D007062 ORTHO05D008941 1.8e-56 223.8 209 86.1
CiPaw.12G106400 Carya illinoinensis HOM05D007062 ORTHO05D008941 3.1e-56 223.0 313 67.4
Sc06g0007370 Simmondsia chinensis HOM05D007062 ORTHO05D008941 4.1e-56 222.6 209 87.1
vmacro05405 Vaccinium macrocarpon HOM05D007062 ORTHO05D008941 1.2e-55 221.1 196 88.3
Cc08_g12960 Coffea canephora HOM05D007062 ORTHO05D008941 2.6e-55 219.9 206 89.3
BcaC07g41714 Brassica carinata HOM05D007062 ORTHO05D008941 3.5e-55 219.5 308 66.6
Lj2g0026876 Lotus japonicus HOM05D007062 ORTHO05D008941 3.5e-55 219.5 312 67.3
HPP92_003260 Vanilla planifolia HOM05D007062 ORTHO05D008941 4.5e-55 219.2 211 88.6
FAN08G1089 Fragaria x ananassa HOM05D007062 ORTHO05D008941 5.9e-55 218.8 205 90.7
FAN18G0001 Fragaria x ananassa HOM05D007062 ORTHO05D008941 5.9e-55 218.8 205 90.7
Os02g0643500 Oryza sativa ssp. japonica HOM05D007062 ORTHO05D008941 5.9e-55 218.8 206 76.7
Cpa.g.sc29.119 Carica papaya HOM05D007062 ORTHO05D008941 7.7e-55 218.4 308 67.2
RcHm_v2.0_Chr7g0202221 Rosa chinensis HOM05D007062 ORTHO05D008941 7.7e-55 218.4 205 90.2
THA.LOC104818475 Tarenaya hassleriana HOM05D007062 ORTHO05D008941 7.7e-55 218.4 308 65.6
BcaC07g42568 Brassica carinata HOM05D007062 ORTHO05D008941 1.7e-54 217.2 308 66.6
Manes.01G076100 Manihot esculenta HOM05D007062 ORTHO05D008941 1.7e-54 217.2 313 63.3
SalBow6G7097 Salvia bowleyana HOM05D007062 ORTHO05D008941 1.7e-54 217.2 309 67.3
Zm00001eb248670 Zea mays HOM05D007062 ORTHO05D008941 1.7e-54 217.2 209 85.6
PSO063G0503 Papaver somniferum HOM05D007062 ORTHO05D008941 2.2e-54 216.9 317 68.1
Medtr5g012110 Medicago truncatula HOM05D007062 ORTHO05D008941 3.8e-54 216.1 209 88.0
BolC8t52291H Brassica oleracea HOM05D007062 ORTHO05D008941 5.0e-54 215.7 313 66.1
Ciclev10021545m.g Citrus clementina HOM05D007062 ORTHO05D008941 5.0e-54 215.7 309 68.0
Duzib205G0297 Durio zibethinus HOM05D007062 ORTHO05D008941 6.5e-54 215.3 321 67.3
Ah.02g116970 Amaranthus hybridus HOM05D007062 ORTHO05D008941 8.5e-54 214.9 303 64.7
C08p47500 Brassica napus HOM05D007062 ORTHO05D008941 8.5e-54 214.9 313 66.1
Sp1g10870 Schrenkiella parvula HOM05D007062 ORTHO05D008941 8.5e-54 214.9 314 66.2
A09p63980 Brassica napus HOM05D007062 ORTHO05D008941 1.9e-53 213.8 313 65.8
Gohir.D08G190800 Gossypium hirsutum HOM05D007062 ORTHO05D008941 2.5e-53 213.4 308 64.0
Migut.A00806 Erythranthe guttata HOM05D007062 ORTHO05D008941 5.5e-53 212.2 314 63.7
Eucgr.D02028 Eucalyptus grandis HOM05D007062 ORTHO05D008941 5.5e-53 212.2 222 65.3
Thhalv10008422m.g Eutrema salsugineum HOM05D007062 ORTHO05D008941 7.2e-53 211.8 308 65.6
BraA09t41747Z Brassica rapa HOM05D007062 ORTHO05D008941 9.4e-53 211.5 313 65.5
PGR031G1282 Punica granatum HOM05D007062 ORTHO05D008941 9.4e-53 211.5 207 74.4
Hund11577 Selenicereus undatus HOM05D007062 ORTHO05D008941 9.4e-53 211.5 202 84.7
Thecc.03G257500 Theobroma cacao HOM05D007062 ORTHO05D008941 1.2e-52 211.1 321 61.7
MSTRG.25539 Avicennia marina HOM05D007062 ORTHO05D008941 1.6e-52 210.7 311 56.9
Sed0027513 Sechium edule HOM05D007062 ORTHO05D008941 1.6e-52 210.7 312 64.7
SEGI_22381 Sequoiadendron giganteum HOM05D007062 ORTHO05D008941 1.6e-52 210.7 204 87.3
FvH4_5g00330 Fragaria vesca HOM05D007062 ORTHO05D008941 2.1e-52 210.3 310 67.1
ATR0568G204 Amborella trichopoda HOM05D007062 ORTHO05D008941 2.7e-52 209.9 196 88.3
Aa31LG1G2430 Aethionema arabicum HOM05D007062 ORTHO05D008941 3.6e-52 209.5 316 55.4
Aqoxy5G03933 Aquilegia oxysepala HOM05D007062 ORTHO05D008941 3.6e-52 209.5 208 88.9
AL1G23540 Arabidopsis lyrata HOM05D007062 ORTHO05D008941 3.6e-52 209.5 309 66.0
Potri.003G112900 Populus trichocarpa HOM05D007062 ORTHO05D008941 3.6e-52 209.5 313 61.7
PSO782G2909 Papaver somniferum HOM05D007062 ORTHO05D008941 4.7e-52 209.1 322 64.3
SGA_v2.0_scaffold120G32845 Striga asiatica HOM05D007062 ORTHO05D008941 6.1e-52 208.8 308 68.2
AT1G12250 Arabidopsis thaliana HOM05D007062 ORTHO05D008941 8.0e-52 208.4 308 65.3
MELO3C005562.2 Cucumis melo HOM05D007062 ORTHO05D008941 1.0e-51 208.0 314 62.7
CsaV3_5G003940 Cucumis sativus L. HOM05D007062 ORTHO05D008941 1.0e-51 208.0 311 62.7
Carub.0001s1193 Capsella rubella HOM05D007062 ORTHO05D008941 3.0e-51 206.5 309 65.4
Gorai.004G200900 Gossypium raimondii HOM05D007062 ORTHO05D008941 3.0e-51 206.5 308 59.1
EL10Ac5g13006 Beta vulgaris HOM05D007062 ORTHO05D008941 4.0e-51 206.1 281 55.2
CANSAT21G0465 Cannabis sativa HOM05D007062 ORTHO05D008941 4.0e-51 206.1 315 66.0
ClCG01G003790 Citrullus lanatus HOM05D007062 ORTHO05D008941 4.0e-51 206.1 312 63.8
QL12p014002 Quercus lobata HOM05D007062 ORTHO05D008941 6.7e-51 205.3 345 41.7
FAN04G1528 Fragaria x ananassa HOM05D007062 ORTHO05D008941 3.3e-50 203.0 241 56.0
MD06G1065500 Malus domestica HOM05D007062 ORTHO05D008941 2.8e-49 199.9 210 86.2
Gohir.A08G172400 Gossypium hirsutum HOM05D007062 ORTHO05D008941 1.6e-47 194.1 193 75.6
Mapoly0083s0077 Marchantia polymorpha HOM05D007062 ORTHO05D008941 3.5e-47 193.0 205 69.8
Pp3c21_17930 Physcomitrium patens HOM05D007062 ORTHO05D008941 8.5e-46 188.3 206 78.2
AUR62007471 Chenopodium quinoa HOM05D007062 ORTHO05D008941 1.9e-45 187.2 183 82.5
Sabra03G0078200 Salix brachista HOM05D007062 ORTHO05D008941 2.1e-44 183.7 397 40.1
SMO137G0193 Selaginella moellendorffii HOM05D007062 ORTHO05D008941 4.7e-44 182.6 204 67.6
CBR_g19734 Chara braunii HOM05D007062 ORTHO05D008941 1.4e-43 181.0 192 70.3
FAN13G1422 Fragaria x ananassa HOM05D007062 ORTHO05D008941 4.5e-39 166.0 187 58.3
DCAR_004919 Daucus carota HOM05D007062 ORTHO05D008941 2.3e-38 163.7 87 92.0
CDE04G1356 Ceratophyllum demersum HOM05D007062 ORTHO05D008941 5.0e-38 162.5 85 91.8
Hma1.2p1_1691F.1_g297800 Hydrangea macrophylla HOM05D007062 ORTHO05D008941 8.6e-38 161.8 85 91.8
Hma1.2p1_1691F.1_g297810 Hydrangea macrophylla HOM05D007062 ORTHO05D008941 8.6e-38 161.8 85 91.8
COL.COLO4_37223 Corchorus olitorius HOM05D007062 ORTHO05D008941 1.0e-35 154.8 87 86.2
AUR62039929 Chenopodium quinoa HOM05D007062 ORTHO05D008941 3.4e-34 149.8 87 83.9
AUR62043761 Chenopodium quinoa HOM05D007062 ORTHO05D008941 3.4e-34 149.8 87 83.9
CARHR012560 Cardamine hirsuta HOM05D007062 ORTHO05D008941 7.5e-34 148.7 85 84.7
Glyma.01G211100 Glycine max HOM05D007062 ORTHO05D008941 9.2e-32 141.7 177 50.3
Dinv39100 Davidia involucrata HOM05D007062 ORTHO05D008941 2.8e-28 130.2 172 57.6
AagrBONN_evm.TU.Sc2ySwM_228.1920 Anthoceros agrestis HOM05D000741 ORTHO05D000506 1.9e-24 117.5 166 71.1
Haze_08582 Corylus avellana HOM05D007062 ORTHO05D008941 1.2e-20 104.8 143 58.0
Psat2g178680 Pisum sativum HOM05D007062 ORTHO05D008941 2.8e-20 103.6 144 90.3
Cfa012777 Carpinus fangiana HOM05D007062 ORTHO05D008941 3.6e-20 103.2 244 63.1
CDE04G0607 Ceratophyllum demersum HOM05D007062 ORTHO05D008941 5.8e-18 95.9 58 81.0
Nn6g34047 Nelumbo nucifera HOM05D007062 ORTHO05D008941 7.5e-18 95.5 157 43.9
GSVIVG01001268001 Vitis vinifera HOM05D007062 ORTHO05D008941 2.2e-17 94.0 58 81.0
CAN.G1293.1 Capsicum annuum HOM05D007062 ORTHO05D008941 6.0e-15 85.9 58 70.7
Lj8A257G61 Lonicera japonica HOM05D007062 ORTHO05D008941 3.3e-13 80.1 45 84.4
Cre17.g721700 Chlamydomonas reinhardtii HOM05D007062 ORTHO05D008941 9.5e-13 78.6 181 48.1
COL.COLO4_37221 Corchorus olitorius HOM05D007062 ORTHO05D008941 8.9e-11 72.0 45 75.6
MCO12G419 Micromonas commoda HOM05D007062 ORTHO05D008941 1.7e-09 67.8 44 72.7
Rhsim10G0100700 Rhododendron simsii HOM05D000726 ORTHO05D007554 2.4e-08 63.9 87 51.7
SEGI_25676 Sequoiadendron giganteum HOM05D007062 ORTHO05D008941 7.8e-07 58.9 40 72.5


User provided reference genes

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