Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr02g0041951 Helianthus annuus HOM05D003851 ORTHO05D023759 2.4e-119 432.2 215 100.0
HanXRQChr17g0567071 Helianthus annuus HOM05D003851 ORTHO05D005657 8.0e-51 204.5 113 91.2
HanXRQChr12g0377711 Helianthus annuus HOM05D003851 ORTHO05D005657 7.5e-49 198.0 125 80.8
ECA234G0471 Erigeron canadensis HOM05D003851 ORTHO05D005657 7.0e-47 191.4 129 74.4
Sabra08G0095800 Salix brachista HOM05D003851 ORTHO05D005657 2.9e-40 169.5 132 66.7
Potri.008G126900 Populus trichocarpa HOM05D003851 ORTHO05D005657 6.4e-40 168.3 134 65.7
Hma1.2p1_0114F.1_g055400 Hydrangea macrophylla HOM05D003851 ORTHO05D005657 1.1e-39 167.5 134 65.7
Manes.06G062600 Manihot esculenta HOM05D003851 ORTHO05D005657 3.2e-39 166.0 134 64.2
Ciclev10014287m.g Citrus clementina HOM05D003851 ORTHO05D005657 7.1e-39 164.9 139 63.3
ECA233G2027 Erigeron canadensis HOM05D003851 ORTHO05D005657 7.1e-39 164.9 130 66.2
FAN17G0190 Fragaria x ananassa HOM05D003851 ORTHO05D005657 1.2e-38 164.1 128 65.6
CiPaw.05G246300 Carya illinoinensis HOM05D003851 ORTHO05D005657 1.6e-38 163.7 128 64.1
FAN07G1894 Fragaria x ananassa HOM05D003851 ORTHO05D005657 1.6e-38 163.7 128 66.4
RcHm_v2.0_Chr4g0433861 Rosa chinensis HOM05D003851 ORTHO05D005657 1.6e-38 163.7 128 68.0
FvH4_4g26260 Fragaria vesca HOM05D003851 ORTHO05D005657 2.1e-38 163.3 128 65.6
FAN12G1256 Fragaria x ananassa HOM05D003851 ORTHO05D005657 2.1e-38 163.3 128 65.6
FAN12G3131 Fragaria x ananassa HOM05D003851 ORTHO05D005657 2.1e-38 163.3 128 65.6
Prupe.1G321000 Prunus persica HOM05D003851 ORTHO05D005657 2.7e-38 162.9 128 64.8
Dinv16173 Davidia involucrata HOM05D003851 ORTHO05D005657 1.7e-37 160.2 158 54.4
Sp1g13470 Schrenkiella parvula HOM05D003851 ORTHO05D005657 1.7e-37 160.2 131 64.9
Lsat_1_v5_gn_4_15461 Lactuca sativa HOM05D003851 ORTHO05D005657 3.0e-37 159.5 93 80.6
BcaC05g25444 Brassica carinata HOM05D003851 ORTHO05D005657 3.9e-37 159.1 134 61.9
A06p11140 Brassica napus HOM05D003851 ORTHO05D005657 3.9e-37 159.1 134 61.9
C05p13260 Brassica napus HOM05D003851 ORTHO05D005657 3.9e-37 159.1 134 61.9
BolC5t30063H Brassica oleracea HOM05D003851 ORTHO05D005657 3.9e-37 159.1 134 61.9
Cfa015793 Carpinus fangiana HOM05D003851 ORTHO05D005657 5.1e-37 158.7 128 64.8
Thhalv10006787m.g Eutrema salsugineum HOM05D003851 ORTHO05D005657 5.1e-37 158.7 131 64.1
PSO017G5384 Papaver somniferum HOM05D003851 ORTHO05D005657 5.1e-37 158.7 131 64.9
GSVIVG01011794001 Vitis vinifera HOM05D003851 ORTHO05D005657 6.6e-37 158.3 123 65.0
Rhsim09G0101400 Rhododendron simsii HOM05D003851 ORTHO05D005657 1.5e-36 157.1 142 61.3
CiPaw.06G014300 Carya illinoinensis HOM05D003851 ORTHO05D005657 2.5e-36 156.4 127 63.8
Haze_00700 Corylus avellana HOM05D003851 ORTHO05D005657 2.5e-36 156.4 130 63.8
PGR102G1971 Punica granatum HOM05D003851 ORTHO05D005657 2.5e-36 156.4 131 64.1
Atru.chr11.357 Acer truncatum HOM05D003851 ORTHO05D005657 3.3e-36 156.0 135 61.5
AT1G15130 Arabidopsis thaliana HOM05D003851 ORTHO05D005657 3.3e-36 156.0 132 62.1
Manes.14G136300 Manihot esculenta HOM05D003851 ORTHO05D005657 3.3e-36 156.0 119 65.5
TWI31G1382 Tripterygium wilfordii HOM05D003851 ORTHO05D005657 3.3e-36 156.0 113 68.1
DCAR_023618 Daucus carota HOM05D003851 ORTHO05D005657 4.3e-36 155.6 129 63.6
PSO478G0832 Papaver somniferum HOM05D003851 ORTHO05D005657 4.3e-36 155.6 131 63.4
Nitab4.5_0004524g0020 Nicotiana tabacum HOM05D003851 ORTHO05D005657 5.6e-36 155.2 134 61.2
AL1G27200 Arabidopsis lyrata HOM05D003851 ORTHO05D005657 7.3e-36 154.8 132 61.4
Carub.0001s1490 Capsella rubella HOM05D003851 ORTHO05D005657 7.3e-36 154.8 134 61.2
CARHR015650 Cardamine hirsuta HOM05D003851 ORTHO05D005657 7.3e-36 154.8 134 61.2
MD13G1031100 Malus domestica HOM05D003851 ORTHO05D005657 1.2e-35 154.1 129 65.1
MD16G1033300 Malus domestica HOM05D003851 ORTHO05D005657 1.2e-35 154.1 131 64.1
Nitab4.5_0000350g0210 Nicotiana tabacum HOM05D003851 ORTHO05D005657 1.2e-35 154.1 136 60.3
Ah.16g102720 Amaranthus hybridus HOM05D003851 ORTHO05D005657 1.6e-35 153.7 137 62.0
Nitab4.5_0001648g0010 Nicotiana tabacum HOM05D003851 ORTHO05D005657 1.6e-35 153.7 135 62.2
arahy.Tifrunner.gnm1.ann1.GYNY95 Arachis hypogaea HOM05D003851 ORTHO05D005657 2.8e-35 152.9 131 64.1
arahy.Tifrunner.gnm1.ann1.QBU7FE Arachis hypogaea HOM05D003851 ORTHO05D005657 2.8e-35 152.9 131 64.1
Cpa.g.sc65.100 Carica papaya HOM05D003851 ORTHO05D005657 3.6e-35 152.5 134 61.9
BcaB03g14554 Brassica carinata HOM05D003851 ORTHO05D005657 4.7e-35 152.1 131 61.8
Eucgr.B02881 Eucalyptus grandis HOM05D003851 ORTHO05D005657 4.7e-35 152.1 136 61.0
Lj3A876T45 Lonicera japonica HOM05D003851 ORTHO05D005657 4.7e-35 152.1 130 63.8
MSTRG.2194 Avicennia marina HOM05D003851 ORTHO05D005657 6.2e-35 151.8 135 63.7
MSTRG.878 Avicennia marina HOM05D003851 ORTHO05D005657 6.2e-35 151.8 135 60.7
CSS0002048 Camellia sinensis var. sinensis HOM05D003851 ORTHO05D005657 6.2e-35 151.8 137 62.0
CSS0020493 Camellia sinensis var. sinensis HOM05D003851 ORTHO05D005657 6.2e-35 151.8 132 63.6
AUR62014128 Chenopodium quinoa HOM05D003851 ORTHO05D005657 6.2e-35 151.8 138 60.9
Nitab4.5_0010188g0010 Nicotiana tabacum HOM05D003851 ORTHO05D005657 6.2e-35 151.8 135 62.2
TAR622G1410 Trochodendron aralioides HOM05D003851 ORTHO05D005657 1.1e-34 151.0 132 62.1
BcaB02g06581 Brassica carinata HOM05D003851 ORTHO05D005657 1.4e-34 150.6 120 64.2
AUR62039549 Chenopodium quinoa HOM05D003851 ORTHO05D005657 1.4e-34 150.6 136 61.0
Potri.010G116400 Populus trichocarpa HOM05D003851 ORTHO05D005657 1.4e-34 150.6 138 58.0
Lalb_Chr02g0145581 Lupinus albus HOM05D003851 ORTHO05D005657 1.8e-34 150.2 126 61.1
Glyma.10G266600 Glycine max HOM05D003851 ORTHO05D005657 2.3e-34 149.8 126 61.9
Lalb_Chr17g0338751 Lupinus albus HOM05D003851 ORTHO05D005657 2.3e-34 149.8 139 59.7
Peaxi162Scf00119g01313 Petunia axillaris HOM05D003851 ORTHO05D005657 2.3e-34 149.8 144 59.7
QL01p002786 Quercus lobata HOM05D003851 ORTHO05D005657 2.3e-34 149.8 128 60.2
ClCG01G006040 Citrullus lanatus HOM05D003851 ORTHO05D005657 3.1e-34 149.4 128 60.9
COL.COLO4_10968 Corchorus olitorius HOM05D003851 ORTHO05D005657 3.1e-34 149.4 133 60.2
Actinidia14940 Actinidia chinensis HOM05D003851 ORTHO05D005657 4.0e-34 149.1 133 60.9
Ca_23695_v3 Cicer arietinum L. HOM05D003851 ORTHO05D005657 4.0e-34 149.1 129 60.5
Migut.E00398 Erythranthe guttata HOM05D003851 ORTHO05D005657 5.2e-34 148.7 137 58.4
CAN.G822.7 Capsicum annuum HOM05D003851 ORTHO05D005657 6.8e-34 148.3 136 60.3
BcaNung05516 Brassica carinata HOM05D003851 ORTHO05D005657 8.9e-34 147.9 97 72.2
C08p45140 Brassica napus HOM05D003851 ORTHO05D005657 8.9e-34 147.9 97 72.2
BolC8t52062H Brassica oleracea HOM05D003851 ORTHO05D005657 8.9e-34 147.9 97 72.2
Sopen04g002640 Solanum pennellii HOM05D003851 ORTHO05D005657 8.9e-34 147.9 133 60.9
Actinidia15239 Actinidia chinensis HOM05D003851 ORTHO05D005657 1.2e-33 147.5 133 58.6
Solyc04g007560.3 Solanum lycopersicum HOM05D003851 ORTHO05D005657 1.2e-33 147.5 133 60.9
Actinidia36692 Actinidia chinensis HOM05D003851 ORTHO05D005657 2.6e-33 146.4 133 58.6
SGA_v2.0_scaffold170G38822 Striga asiatica HOM05D003851 ORTHO05D005657 2.6e-33 146.4 128 60.9
THA.LOC104824160 Tarenaya hassleriana HOM05D003851 ORTHO05D005657 2.6e-33 146.4 128 59.4
MBI06_g17215_MAGBIO Magnolia biondii HOM05D003851 ORTHO05D005657 3.4e-33 146.0 115 66.1
SGA_v2.0_scaffold376G50293 Striga asiatica HOM05D003851 ORTHO05D005657 4.4e-33 145.6 154 56.5
Thecc.02G217200 Theobroma cacao HOM05D003851 ORTHO05D005657 4.4e-33 145.6 133 57.9
Aqoxy3G00152 Aquilegia oxysepala HOM05D003851 ORTHO05D005657 5.8e-33 145.2 118 61.0
MELO3C005328.2 Cucumis melo HOM05D003851 ORTHO05D005657 5.8e-33 145.2 128 59.4
Lj5g0011385 Lotus japonicus HOM05D003851 ORTHO05D005657 5.8e-33 145.2 128 60.9
SalBow8G4927 Salvia bowleyana HOM05D003851 ORTHO05D005657 5.8e-33 145.2 135 60.0
CsaV3_5G028640 Cucumis sativus L. HOM05D003851 ORTHO05D005657 7.6e-33 144.8 128 59.4
Peaxi162Scf00205g00924 Petunia axillaris HOM05D003851 ORTHO05D005657 7.6e-33 144.8 133 58.6
Sed0026980 Sechium edule HOM05D003851 ORTHO05D005657 7.6e-33 144.8 130 60.8
TAR629G0727 Trochodendron aralioides HOM05D003851 ORTHO05D005657 7.6e-33 144.8 137 58.4
CAN.G1489.5 Capsicum annuum HOM05D003851 ORTHO05D005657 9.9e-33 144.4 135 59.3
Glyma.20G124000 Glycine max HOM05D003851 ORTHO05D005657 9.9e-33 144.4 127 61.4
Lsat_1_v5_gn_8_41561 Lactuca sativa HOM05D003851 ORTHO05D005657 1.3e-32 144.1 88 75.0
Nn4g24048 Nelumbo nucifera HOM05D003851 ORTHO05D005657 1.3e-32 144.1 139 56.8
TAR629G0282 Trochodendron aralioides HOM05D003851 ORTHO05D005657 1.7e-32 143.7 137 57.7
VMungo0720G3117 Vigna mungo HOM05D003851 ORTHO05D005657 1.7e-32 143.7 128 59.4
Gohir.A03G148400 Gossypium hirsutum HOM05D003851 ORTHO05D005657 2.2e-32 143.3 132 56.8
Gorai.005G192900 Gossypium raimondii HOM05D003851 ORTHO05D005657 2.2e-32 143.3 132 56.8
SalBow8G1489 Salvia bowleyana HOM05D003851 ORTHO05D005657 2.2e-32 143.3 162 53.1
PGSC0003DMG400030558 Solanum tuberosum HOM05D003851 ORTHO05D005657 2.2e-32 143.3 135 57.8
Cc11_g09150 Coffea canephora HOM05D003851 ORTHO05D005657 3.8e-32 142.5 124 59.7
ATR0602G154 Amborella trichopoda HOM05D003851 ORTHO05D005657 4.9e-32 142.1 153 54.2
EL10Ac6g14256 Beta vulgaris HOM05D003851 ORTHO05D005657 4.9e-32 142.1 114 63.2
Gohir.D02G171500 Gossypium hirsutum HOM05D003851 ORTHO05D005657 4.9e-32 142.1 132 56.8
THA.LOC104805047 Tarenaya hassleriana HOM05D003851 ORTHO05D005657 4.9e-32 142.1 163 50.9
Duzib268G1062 Durio zibethinus HOM05D003851 ORTHO05D005657 6.4e-32 141.7 134 57.5
Medtr1g108690 Medicago truncatula HOM05D003851 ORTHO05D005657 6.4e-32 141.7 129 59.7
Phvul.007G035300 Phaseolus vulgaris HOM05D003851 ORTHO05D005657 6.4e-32 141.7 128 59.4
Sopen05g004260 Solanum pennellii HOM05D003851 ORTHO05D005657 6.4e-32 141.7 135 57.0
Aa31LG1G30 Aethionema arabicum HOM05D003851 ORTHO05D005657 8.4e-32 141.4 129 58.1
Solyc05g008430.4 Solanum lycopersicum HOM05D003851 ORTHO05D005657 1.1e-31 141.0 118 61.0
A09p61550 Brassica napus HOM05D003851 ORTHO05D005657 1.4e-31 140.6 133 57.1
BraA09t41528Z Brassica rapa HOM05D003851 ORTHO05D005657 1.4e-31 140.6 133 57.1
CANSAT01G1493 Cannabis sativa HOM05D003851 ORTHO05D005657 1.4e-31 140.6 149 55.0
Zm00001eb044760 Zea mays HOM05D003851 ORTHO05D005657 1.4e-31 140.6 128 57.8
SEGI_09716 Sequoiadendron giganteum HOM05D003851 ORTHO05D005657 4.1e-31 139.0 132 58.3
TPR.G4868 Trifolium pratense HOM05D003851 ORTHO05D005657 4.1e-31 139.0 126 58.7
BraA06t24294Z Brassica rapa HOM05D003851 ORTHO05D005657 2.1e-30 136.7 118 61.9
Lalb_Chr21g0308571 Lupinus albus HOM05D003851 ORTHO05D005657 6.0e-30 135.2 126 56.3
Os10g0495300 Oryza sativa ssp. japonica HOM05D003851 ORTHO05D005657 7.8e-30 134.8 129 54.3
HPP92_013139 Vanilla planifolia HOM05D003851 ORTHO05D005657 7.8e-30 134.8 132 54.5
CDE04G2900 Ceratophyllum demersum HOM05D003851 ORTHO05D130495 6.6e-29 131.7 138 51.4
Oeu062877.3 Olea europaea HOM05D003851 ORTHO05D005657 6.6e-29 131.7 162 50.0
Mapoly0004s0114 Marchantia polymorpha HOM05D003851 ORTHO05D005657 1.1e-28 131.0 144 50.7
Zm00001eb221160 Zea mays HOM05D003851 ORTHO05D005657 6.2e-27 125.2 95 61.1
SMO141G0055 Selaginella moellendorffii HOM05D003851 ORTHO05D005657 8.1e-27 124.8 108 59.3
Pp3c24_13730 Physcomitrium patens HOM05D003851 ORTHO05D005657 1.8e-26 123.6 130 48.5
HanXRQChr15g0494861 Helianthus annuus HOM05D006120 ORTHO05D007913 3.1e-26 122.9 58 96.6
vmacro10621 Vaccinium macrocarpon HOM05D003851 ORTHO05D005657 3.1e-26 122.9 123 55.3
CDE04G3131 Ceratophyllum demersum HOM05D003851 ORTHO05D005657 5.2e-26 122.1 129 50.4
CDE08G0110 Ceratophyllum demersum HOM05D003851 ORTHO05D005657 8.9e-26 121.3 128 49.2
arahy.Tifrunner.gnm1.ann1.N6SBJA Arachis hypogaea HOM05D003851 ORTHO05D005657 1.5e-25 120.6 140 53.6
Hund25010 Selenicereus undatus HOM05D003851 ORTHO05D005657 1.3e-24 117.5 125 55.2
AagrBONN_evm.TU.Sc2ySwM_340.388 Anthoceros agrestis HOM05D003851 ORTHO05D005657 2.9e-24 116.3 134 50.0
Pp3c8_14930 Physcomitrium patens HOM05D003851 ORTHO05D005657 3.8e-24 115.9 129 43.4
QL01p041527 Quercus lobata HOM05D000176 ORTHO05D000106 6.6e-21 105.1 98 55.1
ECA233G2539 Erigeron canadensis HOM05D000004 ORTHO05D000002 3.6e-19 99.4 127 46.5
FAN07G0165 Fragaria x ananassa HOM05D003851 ORTHO05D023759 4.6e-14 82.4 46 82.6
CBR_g20272 Chara braunii HOM05D003851 ORTHO05D005657 1.8e-13 80.5 97 45.4
unitig_699.g19528 Utricularia gibba HOM05D003851 ORTHO05D005657 3.9e-13 79.3 58 65.5
HanXRQChr16g0507001 Helianthus annuus HOM05D006120 ORTHO05D219603 7.4e-12 75.1 34 94.1
CDE07G0047 Ceratophyllum demersum HOM05D003851 ORTHO05D130129 2.0e-09 67.0 51 54.9
QL03p031079 Quercus lobata HOM05D003851 ORTHO05D004072 2.6e-09 66.6 74 48.6
QL03p031464 Quercus lobata HOM05D003851 ORTHO05D004072 2.6e-09 66.6 74 48.6
arahy.Tifrunner.gnm1.ann1.BS651N Arachis hypogaea HOM05D002446 ORTHO05D023759 1.4e-07 60.8 73 47.9
Cre01.g004350 Chlamydomonas reinhardtii HOM05D003851 ORTHO05D005657 1.4e-07 60.8 80 32.5


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