Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr02g0036691 Helianthus annuus HOM05D008481 ORTHO05D010853 6.9e-223 776.9 376 100.0
HanXRQChr13g0406131 Helianthus annuus HOM05D008481 ORTHO05D010853 6.9e-199 697.2 375 90.1
HanXRQChr03g0068301 Helianthus annuus HOM05D008481 ORTHO05D010853 5.1e-178 627.9 377 80.6
HanXRQChr14g0443501 Helianthus annuus HOM05D001485 ORTHO05D001384 3.7e-152 542.0 355 73.8
HanXRQChr03g0068141 Helianthus annuus HOM05D008481 ORTHO05D010853 1.8e-146 523.1 374 63.4
HanXRQChr13g0421041 Helianthus annuus HOM05D008481 ORTHO05D010853 1.2e-139 500.4 374 61.5
HanXRQChr10g0304581 Helianthus annuus HOM05D008481 ORTHO05D010853 1.6e-139 500.0 366 62.3
HanXRQChr04g0123551 Helianthus annuus HOM05D008481 ORTHO05D010853 2.9e-136 489.2 319 70.2
HanXRQChr15g0467161 Helianthus annuus HOM05D008481 ORTHO05D010853 8.9e-130 467.6 370 58.4
HanXRQChr05g0143231 Helianthus annuus HOM05D008481 ORTHO05D010853 1.2e-126 457.2 369 58.8
HanXRQChr17g0545601 Helianthus annuus HOM05D008481 ORTHO05D010853 2.3e-125 453.0 287 73.5
HanXRQChr13g0403351 Helianthus annuus HOM05D008481 ORTHO05D010853 5.8e-113 411.8 375 52.5
HanXRQChr14g0444101 Helianthus annuus HOM05D008481 ORTHO05D010853 1.3e-112 410.6 375 51.5
HanXRQChr13g0425251 Helianthus annuus HOM05D008481 ORTHO05D010853 2.2e-112 409.8 370 52.4
HanXRQChr11g0333451 Helianthus annuus HOM05D008481 ORTHO05D010853 6.4e-112 408.3 377 51.2
HanXRQChr08g0221501 Helianthus annuus HOM05D008481 ORTHO05D010853 8.4e-112 407.9 373 49.3
HanXRQChr13g0404711 Helianthus annuus HOM05D008481 ORTHO05D010853 8.4e-112 407.9 378 49.2
HanXRQChr04g0098781 Helianthus annuus HOM05D008481 ORTHO05D010853 1.4e-111 407.1 377 52.0
HanXRQChr05g0132501 Helianthus annuus HOM05D008481 ORTHO05D010853 1.4e-111 407.1 377 50.9
HanXRQChr17g0537341 Helianthus annuus HOM05D008481 ORTHO05D010853 1.4e-111 407.1 376 50.0
HanXRQChr14g0447151 Helianthus annuus HOM05D000026 ORTHO05D000127 4.2e-111 405.6 377 50.1
HanXRQChr06g0165321 Helianthus annuus HOM05D008481 ORTHO05D010853 5.4e-111 405.2 376 51.1
HanXRQChr10g0279551 Helianthus annuus HOM05D008481 ORTHO05D010853 9.3e-111 404.4 377 51.7
HanXRQChr01g0028171 Helianthus annuus HOM05D008481 ORTHO05D010853 2.1e-110 403.3 370 52.2
HanXRQChr09g0247291 Helianthus annuus HOM05D000103 ORTHO05D000049 2.1e-110 403.3 378 49.5
HanXRQChr13g0424061 Helianthus annuus HOM05D000009 ORTHO05D010853 2.7e-110 402.9 369 48.8
HanXRQChr11g0323671 Helianthus annuus HOM05D008481 ORTHO05D010853 3.5e-110 402.5 378 49.5
HanXRQChr05g0131281 Helianthus annuus HOM05D008481 ORTHO05D010853 4.6e-110 402.1 313 60.4
HanXRQChr03g0080651 Helianthus annuus HOM05D008481 ORTHO05D010853 7.8e-110 401.4 370 48.9
HanXRQChr11g0345591 Helianthus annuus HOM05D008481 ORTHO05D010853 1.0e-109 401.0 373 53.9
HanXRQChr13g0424211 Helianthus annuus HOM05D008481 ORTHO05D010853 1.7e-109 400.2 378 47.9
HanXRQChr04g0119421 Helianthus annuus HOM05D008481 ORTHO05D010853 5.1e-109 398.7 374 50.0
HanXRQChr04g0119441 Helianthus annuus HOM05D008481 ORTHO05D010853 1.9e-108 396.7 376 49.5
HanXRQChr06g0175741 Helianthus annuus HOM05D008481 ORTHO05D010853 1.4e-106 390.6 503 40.2
HanXRQChr06g0176691 Helianthus annuus HOM05D008481 ORTHO05D010853 2.6e-105 386.3 362 48.6
HanXRQChr01g0014081 Helianthus annuus HOM05D008481 ORTHO05D010853 1.0e-101 374.4 409 45.2
HanXRQChr12g0372911 Helianthus annuus HOM05D008481 ORTHO05D010853 1.0e-101 374.4 266 66.5
HanXRQChr04g0099031 Helianthus annuus HOM05D008481 ORTHO05D010853 8.7e-93 344.7 330 48.5
HanXRQChr02g0039311 Helianthus annuus HOM05D008481 ORTHO05D010853 3.1e-90 336.3 236 66.1
HanXRQChr10g0292931 Helianthus annuus HOM05D008481 ORTHO05D010853 1.2e-89 334.3 324 49.1
HanXRQChr08g0216321 Helianthus annuus HOM05D000374 ORTHO05D000238 1.8e-85 320.5 377 42.4
HanXRQChr09g0238771 Helianthus annuus HOM05D008481 ORTHO05D010853 1.0e-77 294.7 266 48.1
HanXRQChr06g0175731 Helianthus annuus HOM05D008481 ORTHO05D010853 9.7e-76 288.1 190 70.0
HanXRQChr13g0423431 Helianthus annuus HOM05D008481 ORTHO05D010853 1.9e-63 247.3 181 60.8
HanXRQChr17g0555551 Helianthus annuus HOM05D000430 ORTHO05D010853 3.0e-61 240.0 165 69.1
HanXRQChr06g0178781 Helianthus annuus HOM05D008481 ORTHO05D010853 5.0e-48 196.1 347 34.0
HanXRQChr10g0293981 Helianthus annuus HOM05D000352 ORTHO05D010853 4.1e-34 149.8 126 54.0
ECA247G0145 Erigeron canadensis HOM05D008481 ORTHO05D020572 9.8e-28 128.6 365 27.4
HanXRQChr06g0175721 Helianthus annuus HOM05D000259 ORTHO05D000155 4.1e-26 123.2 403 24.8
ECA240G4703 Erigeron canadensis HOM05D008481 ORTHO05D020572 9.2e-26 122.1 371 26.7
HanXRQChr04g0116991 Helianthus annuus HOM05D000103 ORTHO05D000049 3.6e-22 110.2 352 25.6
HanXRQChr11g0332071 Helianthus annuus HOM05D002629 ORTHO05D015691 6.2e-22 109.4 363 24.8
HanXRQChr02g0035101 Helianthus annuus HOM05D008481 ORTHO05D010853 5.2e-21 106.3 98 51.0
HanXRQChr03g0093141 Helianthus annuus HOM05D002629 ORTHO05D003221 6.8e-21 105.9 361 24.7
HanXRQChr13g0421571 Helianthus annuus HOM05D002629 ORTHO05D015691 8.9e-21 105.5 363 25.6
HanXRQChr13g0421581 Helianthus annuus HOM05D002629 ORTHO05D015691 8.9e-21 105.5 363 25.6
HanXRQChr16g0527861 Helianthus annuus HOM05D002629 ORTHO05D015691 8.9e-21 105.5 364 25.0
HanXRQChr01g0014131 Helianthus annuus HOM05D002629 ORTHO05D015691 2.0e-20 104.4 363 25.3
HanXRQChr08g0223151 Helianthus annuus HOM05D002629 ORTHO05D015691 2.0e-20 104.4 363 25.3
HanXRQChr01g0009301 Helianthus annuus HOM05D002629 ORTHO05D015691 2.6e-20 104.0 357 24.6
HanXRQChr13g0423421 Helianthus annuus HOM05D008481 ORTHO05D010853 2.2e-19 100.9 70 65.7
HanXRQChr07g0196561 Helianthus annuus HOM05D008481 ORTHO05D010853 1.2e-17 95.1 102 46.1
HanXRQChr02g0054601 Helianthus annuus HOM05D002629 ORTHO05D015691 2.0e-17 94.4 410 23.9
HanXRQChr07g0196831 Helianthus annuus HOM05D002629 ORTHO05D015691 1.7e-16 91.3 324 24.4
ECA247G2483 Erigeron canadensis HOM05D008481 ORTHO05D020572 1.9e-15 87.8 378 24.6
HanXRQChr01g0016981 Helianthus annuus HOM05D002629 ORTHO05D015691 4.3e-15 86.7 217 30.0
ECA236G1121 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.8e-13 81.3 225 27.6
HanXRQChr13g0387641 Helianthus annuus HOM05D002629 ORTHO05D015691 1.8e-13 81.3 308 23.4
ECA238G1460 Erigeron canadensis HOM05D008481 ORTHO05D020572 6.8e-13 79.3 170 29.4
Sopen09g022940 Solanum pennellii HOM05D000002 ORTHO05D000001 6.8e-13 79.3 185 27.0
Sopen05g021360 Solanum pennellii HOM05D000002 ORTHO05D000001 9.8e-12 75.5 224 25.9
PGSC0003DMG400013513 Solanum tuberosum HOM05D000002 ORTHO05D000001 1.1e-10 72.0 156 26.9
Sopen04g021420 Solanum pennellii HOM05D000002 ORTHO05D000001 1.9e-10 71.2 169 26.0
HanXRQChr14g0429821 Helianthus annuus HOM05D000002 ORTHO05D000001 2.4e-10 70.9 163 26.4
HanXRQChr01g0010101 Helianthus annuus HOM05D002629 ORTHO05D015691 3.2e-10 70.5 286 23.1
MSTRG.17282 Avicennia marina HOM05D000773 ORTHO05D000588 5.4e-10 69.7 102 33.3
HanXRQChr10g0310951 Helianthus annuus HOM05D000002 ORTHO05D000001 9.2e-10 68.9 155 30.3
DCAR_000625 Daucus carota HOM05D000773 ORTHO05D000588 2.7e-09 67.4 87 39.1
HanXRQChr14g0456471 Helianthus annuus HOM05D000103 ORTHO05D000001 2.7e-09 67.4 161 25.5
HanXRQChr02g0038571 Helianthus annuus HOM05D000002 ORTHO05D000001 3.5e-09 67.0 156 25.6
HanXRQChr06g0174011 Helianthus annuus HOM05D000002 ORTHO05D000001 4.6e-09 66.6 161 25.5
Nitab4.5_0001702g0140 Nicotiana tabacum HOM05D000773 ORTHO05D000588 4.6e-09 66.6 65 43.1
ECA240G3418 Erigeron canadensis HOM05D000773 ORTHO05D000588 7.8e-09 65.9 96 33.3
SHI04496 Sapria himalayana HOM05D000002 ORTHO05D000001 7.8e-09 65.9 165 24.8
Sopen05g028320 Solanum pennellii HOM05D000773 ORTHO05D000588 7.8e-09 65.9 65 40.0
GSVIVG01027004001 Vitis vinifera HOM05D000773 ORTHO05D000588 7.8e-09 65.9 87 35.6
Nitab4.5_0003779g0070 Nicotiana tabacum HOM05D000773 ORTHO05D000588 1.0e-08 65.5 80 37.5
Peaxi162Scf00191g01433 Petunia axillaris HOM05D000773 ORTHO05D000588 1.0e-08 65.5 65 41.5
Solyc05g049960.4 Solanum lycopersicum HOM05D000773 ORTHO05D000588 1.0e-08 65.5 65 40.0
CSS0012492 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.3e-08 65.1 206 23.3
HanXRQChr10g0279691 Helianthus annuus HOM05D000129 ORTHO05D000144 1.3e-08 65.1 109 30.3
PGSC0003DMG400021657 Solanum tuberosum HOM05D000773 ORTHO05D000588 1.3e-08 65.1 65 40.0
DCAR_008615 Daucus carota HOM05D000773 ORTHO05D000588 2.3e-08 64.3 85 35.3
HanXRQChr11g0342821 Helianthus annuus HOM05D000002 ORTHO05D000001 2.3e-08 64.3 155 28.4
Sabra15G0058200 Salix brachista HOM05D000002 ORTHO05D000001 2.3e-08 64.3 178 23.6
Sopen04g023400 Solanum pennellii HOM05D000002 ORTHO05D000001 3.0e-08 63.9 167 25.7
AL6G45830 Arabidopsis lyrata HOM05D000773 ORTHO05D000588 3.9e-08 63.5 92 34.8
HanXRQChr13g0426641 Helianthus annuus HOM05D000773 ORTHO05D000588 3.9e-08 63.5 83 31.3
SHI07801 Sapria himalayana HOM05D000002 ORTHO05D000001 3.9e-08 63.5 165 23.6
CDE06G0322 Ceratophyllum demersum HOM05D004394 ORTHO05D005208 5.1e-08 63.2 84 36.9
ECA232G1928 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.1e-08 63.2 166 26.5
Ciclev10019137m.g Citrus clementina HOM05D000773 ORTHO05D000588 6.6e-08 62.8 93 33.3
HanXRQChr15g0467201 Helianthus annuus HOM05D000002 ORTHO05D000001 6.6e-08 62.8 157 26.8
Peaxi162Scf00020g00813 Petunia axillaris HOM05D000773 ORTHO05D000588 8.6e-08 62.4 65 40.0
Hma1.2p1_1123F.1_g259420 Hydrangea macrophylla HOM05D000773 ORTHO05D000588 1.1e-07 62.0 100 32.0
SHI25733 Sapria himalayana HOM05D000002 ORTHO05D000001 1.1e-07 62.0 163 22.1
TAR629G1697 Trochodendron aralioides HOM05D000773 ORTHO05D000588 1.1e-07 62.0 124 28.2
Lsat_1_v5_gn_3_137381 Lactuca sativa HOM05D000773 ORTHO05D000588 1.5e-07 61.6 98 27.6
Sabra14G0062900 Salix brachista HOM05D000773 ORTHO05D000588 1.5e-07 61.6 97 35.1
SHI05308 Sapria himalayana HOM05D000002 ORTHO05D000001 1.5e-07 61.6 167 22.8
ECA247G1667 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.9e-07 61.2 167 25.1
SHI27456 Sapria himalayana HOM05D000002 ORTHO05D000001 1.9e-07 61.2 157 23.6
SHI28896 Sapria himalayana HOM05D000002 ORTHO05D000001 1.9e-07 61.2 163 22.1
CSS0020078 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.5e-07 60.8 206 22.8
CSS0036723 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.5e-07 60.8 206 24.3
Duzib235G1468 Durio zibethinus HOM05D000002 ORTHO05D000001 2.5e-07 60.8 162 27.8
HanXRQChr02g0050541 Helianthus annuus HOM05D000002 ORTHO05D000001 2.5e-07 60.8 155 25.8
Nitab4.5_0000583g0230 Nicotiana tabacum HOM05D000773 ORTHO05D000588 2.5e-07 60.8 65 36.9
Sabra02G0128100 Salix brachista HOM05D000773 ORTHO05D000588 2.5e-07 60.8 88 35.2
SalBow3G0125 Salvia bowleyana HOM05D000773 ORTHO05D000588 2.5e-07 60.8 117 29.9
SHI29707 Sapria himalayana HOM05D000002 ORTHO05D000001 2.5e-07 60.8 157 22.9
DCAR_006936 Daucus carota HOM05D000773 ORTHO05D000588 3.3e-07 60.5 98 32.7
HanXRQChr02g0045931 Helianthus annuus HOM05D000583 ORTHO05D000442 3.3e-07 60.5 53 43.4
SHI00860 Sapria himalayana HOM05D000002 ORTHO05D000001 3.3e-07 60.5 170 22.4
SHI02145 Sapria himalayana HOM05D000002 ORTHO05D000001 3.3e-07 60.5 163 21.5
SHI10121 Sapria himalayana HOM05D000002 ORTHO05D000001 3.3e-07 60.5 157 23.6
Cpa.g.sc1258.5 Carica papaya HOM05D000773 ORTHO05D000588 4.3e-07 60.1 66 34.8
Ciclev10019313m.g Citrus clementina HOM05D000773 ORTHO05D000588 4.3e-07 60.1 105 30.5
ECA246G4004 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.3e-07 60.1 290 22.4
HanXRQChr12g0366491 Helianthus annuus HOM05D000002 ORTHO05D000001 4.3e-07 60.1 156 24.4
Potri.014G086700 Populus trichocarpa HOM05D000773 ORTHO05D000588 4.3e-07 60.1 88 35.2
CAN.G78.96 Capsicum annuum HOM05D000773 ORTHO05D000588 5.6e-07 59.7 81 34.6
HanXRQChr11g0322801 Helianthus annuus HOM05D000002 ORTHO05D000001 5.6e-07 59.7 164 23.2
SHI18782 Sapria himalayana HOM05D000002 ORTHO05D000001 5.6e-07 59.7 167 23.4
CSS0008639 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 7.3e-07 59.3 179 24.6
vmacro20920 Vaccinium macrocarpon HOM05D000773 ORTHO05D000588 7.3e-07 59.3 103 32.0
AL4G45260 Arabidopsis lyrata HOM05D000773 ORTHO05D000588 9.5e-07 58.9 87 34.5
CDE05G1437 Ceratophyllum demersum HOM05D000773 ORTHO05D000588 9.5e-07 58.9 96 31.2
ECA232G4777 Erigeron canadensis HOM05D000002 ORTHO05D000001 9.5e-07 58.9 187 20.9
Manes.01G255100 Manihot esculenta HOM05D000773 ORTHO05D000588 9.5e-07 58.9 97 30.9
Potri.002G161100 Populus trichocarpa HOM05D000773 ORTHO05D000588 9.5e-07 58.9 93 33.3
HanXRQChr05g0136641 Helianthus annuus HOM05D000309 ORTHO05D000001 1.2e-06 58.5 161 23.6
SHI22731 Sapria himalayana HOM05D000002 ORTHO05D000001 1.2e-06 58.5 164 21.3
TWI32G0558 Tripterygium wilfordii HOM05D000773 ORTHO05D000588 1.2e-06 58.5 83 33.7
GSVIVG01019386001 Vitis vinifera HOM05D000773 ORTHO05D000588 1.2e-06 58.5 87 33.3
GSVIVG01037631001 Vitis vinifera HOM05D000092 ORTHO05D000042 1.2e-06 58.5 188 22.3
Lsat_1_v5_gn_6_5381 Lactuca sativa HOM05D000773 ORTHO05D000588 1.6e-06 58.2 105 30.5
SHI10423 Sapria himalayana HOM05D000002 ORTHO05D000001 1.6e-06 58.2 163 20.9
HanXRQChr11g0351931 Helianthus annuus HOM05D001126 ORTHO05D000991 2.1e-06 57.8 51 43.1
FvH4_7g13272 Fragaria vesca HOM05D000002 ORTHO05D000001 2.8e-06 57.4 162 24.1
SHI26423 Sapria himalayana HOM05D000002 ORTHO05D000001 2.8e-06 57.4 157 22.9
Actinidia02834 Actinidia chinensis HOM05D000773 ORTHO05D000588 3.6e-06 57.0 98 30.6
AUR62010710 Chenopodium quinoa HOM05D000773 ORTHO05D000588 3.6e-06 57.0 100 32.0
HanXRQChr02g0049901 Helianthus annuus HOM05D000002 ORTHO05D000001 3.6e-06 57.0 156 25.0
Hma1.2p1_0432F.1_g151640 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 3.6e-06 57.0 115 29.6
Hma1.2p1_0498F.1_g166620 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 3.6e-06 57.0 93 29.0
Lj7A510G35 Lonicera japonica HOM05D000773 ORTHO05D000588 3.6e-06 57.0 103 30.1
PGR004G1580 Punica granatum HOM05D000002 ORTHO05D000001 3.6e-06 57.0 194 22.2
SHI12349 Sapria himalayana HOM05D000002 ORTHO05D000001 3.6e-06 57.0 157 21.7
SHI27161 Sapria himalayana HOM05D000002 ORTHO05D000001 3.6e-06 57.0 169 22.5
SHI46254 Sapria himalayana HOM05D000002 ORTHO05D000001 3.6e-06 57.0 157 22.3
TWI59G0423 Tripterygium wilfordii HOM05D000773 ORTHO05D000588 3.6e-06 57.0 90 32.2
MSTRG.13849 Avicennia marina HOM05D000773 ORTHO05D000588 4.7e-06 56.6 91 31.9
CiPaw.12G091700 Carya illinoinensis HOM05D000773 ORTHO05D000588 4.7e-06 56.6 95 31.6
ECA246G5016 Erigeron canadensis HOM05D008481 ORTHO05D020572 4.7e-06 56.6 237 23.2
HanXRQChr14g0436351 Helianthus annuus HOM05D000002 ORTHO05D000001 4.7e-06 56.6 114 23.7
SHI07029 Sapria himalayana HOM05D000002 ORTHO05D000001 4.7e-06 56.6 157 22.3
SHI12752 Sapria himalayana HOM05D000002 ORTHO05D000001 4.7e-06 56.6 165 23.0
SHI16435 Sapria himalayana HOM05D000002 ORTHO05D000001 4.7e-06 56.6 157 22.9
GSVIVG01038695001 Vitis vinifera HOM05D000906 ORTHO05D000713 4.7e-06 56.6 185 24.3
CARHR141300 Cardamine hirsuta HOM05D000773 ORTHO05D000588 6.2e-06 56.2 88 31.8
Haze_15529 Corylus avellana HOM05D000773 ORTHO05D000588 6.2e-06 56.2 81 32.1
Gorai.008G120900 Gossypium raimondii HOM05D000773 ORTHO05D000588 6.2e-06 56.2 80 30.0
HanXRQChr14g0436881 Helianthus annuus HOM05D000352 ORTHO05D000001 6.2e-06 56.2 146 23.3
Sabra17G0031400 Salix brachista HOM05D000002 ORTHO05D000001 6.2e-06 56.2 179 22.3
Atru.chr5.519 Acer truncatum HOM05D000773 ORTHO05D000588 8.1e-06 55.8 84 32.1
CSS0037299 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 8.1e-06 55.8 114 27.2
AUR62027257 Chenopodium quinoa HOM05D000773 ORTHO05D000588 8.1e-06 55.8 80 36.2
Ca_14263_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 8.1e-06 55.8 189 22.8
ECA248G2246 Erigeron canadensis HOM05D000002 ORTHO05D000001 8.1e-06 55.8 185 20.5
Hma1.2p1_3199F.1_g333880 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 8.1e-06 55.8 128 25.8


User provided reference genes

Program Settings