Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr01g0027941 Helianthus annuus HOM05D001879 ORTHO05D007957 0.0e+00 1558.9 857 100.0
ECA246G2822 Erigeron canadensis HOM05D001879 ORTHO05D007957 6.2e-280 967.6 750 69.9
Dinv44961 Davidia involucrata HOM05D001879 ORTHO05D007957 2.2e-248 862.8 787 61.0
Lj4A759G42 Lonicera japonica HOM05D001879 ORTHO05D007957 2.9e-245 852.4 895 56.1
Hma1.2p1_0210F.1_g089520 Hydrangea macrophylla HOM05D001879 ORTHO05D007957 2.5e-244 849.4 813 58.9
Actinidia38101 Actinidia chinensis HOM05D001879 ORTHO05D007957 1.5e-241 840.1 833 56.5
Lsat_1_v5_gn_6_112340 Lactuca sativa HOM05D001879 ORTHO05D007957 3.1e-239 832.4 880 57.7
Nitab4.5_0000164g0140 Nicotiana tabacum HOM05D001879 ORTHO05D007957 5.3e-239 831.6 923 52.7
Nitab4.5_0003803g0010 Nicotiana tabacum HOM05D001879 ORTHO05D007957 7.0e-239 831.2 921 52.6
Actinidia08249 Actinidia chinensis HOM05D001879 ORTHO05D007957 4.2e-236 822.0 785 58.3
Cc10_g05700 Coffea canephora HOM05D001879 ORTHO05D007957 4.2e-236 822.0 761 58.5
Potri.014G016900 Populus trichocarpa HOM05D001879 ORTHO05D007957 3.6e-235 818.9 924 53.2
Gohir.A01G122900 Gossypium hirsutum HOM05D001879 ORTHO05D007957 1.4e-234 817.0 883 56.1
CAN.G724.12 Capsicum annuum HOM05D001879 ORTHO05D007957 1.5e-233 813.5 783 56.7
Manes.05G181300 Manihot esculenta HOM05D001879 ORTHO05D007957 1.5e-233 813.5 785 56.7
Cfa013682 Carpinus fangiana HOM05D001879 ORTHO05D007957 3.4e-233 812.4 933 54.3
TWI56G1363 Tripterygium wilfordii HOM05D001879 ORTHO05D007957 3.4e-233 812.4 927 55.3
QL12p037915 Quercus lobata HOM05D001879 ORTHO05D007957 4.4e-233 812.0 910 54.0
Ca_15906_v3 Cicer arietinum L. HOM05D001879 ORTHO05D007957 2.8e-232 809.3 879 54.3
Gorai.002G135500 Gossypium raimondii HOM05D001879 ORTHO05D007957 3.1e-231 805.8 922 53.6
Glyma.04G045100 Glycine max HOM05D001879 ORTHO05D007957 2.3e-229 799.7 874 55.0
CANSAT11G0135 Cannabis sativa HOM05D001879 ORTHO05D007957 5.0e-229 798.5 889 52.9
Phvul.009G071000 Phaseolus vulgaris HOM05D001879 ORTHO05D007957 5.0e-229 798.5 883 53.3
Solyc04g077930.4 Solanum lycopersicum HOM05D001879 ORTHO05D007957 1.5e-228 797.0 838 53.3
FvH4_2g33210 Fragaria vesca HOM05D001879 ORTHO05D007957 1.9e-228 796.6 928 52.5
vmacro22058 Vaccinium macrocarpon HOM05D001879 ORTHO05D007957 2.5e-228 796.2 871 53.8
Sopen04g031530 Solanum pennellii HOM05D001879 ORTHO05D007957 5.5e-228 795.0 838 53.2
VMungo1309G0716 Vigna mungo HOM05D001879 ORTHO05D007957 7.2e-228 794.7 884 53.8
arahy.Tifrunner.gnm1.ann1.0Z12M9 Arachis hypogaea HOM05D001879 ORTHO05D007957 3.6e-227 792.3 890 53.4
Lj1g0023876 Lotus japonicus HOM05D001879 ORTHO05D007957 4.7e-227 792.0 890 52.5
PGR031G1956 Punica granatum HOM05D001879 ORTHO05D007957 8.0e-227 791.2 889 53.7
Gohir.D01G110700 Gossypium hirsutum HOM05D001879 ORTHO05D007957 3.0e-226 789.3 934 52.9
GSVIVG01009355001 Vitis vinifera HOM05D001879 ORTHO05D007957 5.2e-226 788.5 821 54.3
arahy.Tifrunner.gnm1.ann1.D4I9HU Arachis hypogaea HOM05D001879 ORTHO05D007957 1.2e-225 787.3 887 53.2
MELO3C016811.2 Cucumis melo HOM05D001879 ORTHO05D007648 1.2e-225 787.3 909 51.2
CsaV3_4G035000 Cucumis sativus L. HOM05D001879 ORTHO05D007957 4.4e-225 785.4 908 51.1
MD15G1071100 Malus domestica HOM05D001879 ORTHO05D007957 9.8e-225 784.3 900 54.6
Medtr3g103040 Medicago truncatula HOM05D001879 ORTHO05D007957 9.8e-225 784.3 903 51.7
FAN15G2911 Fragaria x ananassa HOM05D001879 ORTHO05D007957 2.2e-224 783.1 928 51.4
Psat0s3943g0040 Pisum sativum HOM05D001879 ORTHO05D007957 2.2e-224 783.1 881 52.6
Migut.N02775 Erythranthe guttata HOM05D001879 ORTHO05D007957 2.8e-224 782.7 794 54.3
MD08G1085900 Malus domestica HOM05D001879 ORTHO05D007957 3.7e-224 782.3 920 54.6
CiPaw.07G175800 Carya illinoinensis HOM05D001879 ORTHO05D007957 4.9e-224 781.9 821 54.8
Glyma.06G045600 Glycine max HOM05D001879 ORTHO05D007957 6.3e-224 781.6 880 52.7
FAN27G1994 Fragaria x ananassa HOM05D001879 ORTHO05D007957 1.4e-223 780.4 925 53.8
Sabra14G0010700 Salix brachista HOM05D001879 ORTHO05D007957 9.2e-223 777.7 937 51.0
RcHm_v2.0_Chr6g0309461 Rosa chinensis HOM05D001879 ORTHO05D007957 5.9e-222 775.0 789 56.3
FAN20G0243 Fragaria x ananassa HOM05D001879 ORTHO05D007957 1.0e-221 774.2 784 56.4
Oeu057374.1 Olea europaea HOM05D001879 ORTHO05D007957 1.0e-221 774.2 846 53.3
COL.COLO4_28516 Corchorus olitorius HOM05D001879 ORTHO05D007957 1.5e-220 770.4 759 56.9
Lalb_Chr11g0062861 Lupinus albus HOM05D001879 ORTHO05D007957 1.9e-220 770.0 797 54.3
Eucgr.F02257 Eucalyptus grandis HOM05D001879 ORTHO05D007957 9.5e-220 767.7 835 53.7
TPR.G33684 Trifolium pratense HOM05D001879 ORTHO05D007957 8.0e-219 764.6 909 53.9
ClCG05G020560 Citrullus lanatus HOM05D001879 ORTHO05D007957 2.0e-217 760.0 940 48.6
SalBow6G3417 Salvia bowleyana HOM05D001879 ORTHO05D007957 2.9e-216 756.1 904 50.7
FAN24G3463 Fragaria x ananassa HOM05D001879 ORTHO05D007957 4.9e-216 755.4 970 52.1
THA.LOC104820515 Tarenaya hassleriana HOM05D001879 ORTHO05D007957 1.2e-214 750.7 795 52.2
AUR62037429 Chenopodium quinoa HOM05D001879 ORTHO05D007957 1.6e-214 750.4 786 54.5
SGA_v2.0_scaffold152G36803 Striga asiatica HOM05D001879 ORTHO05D007957 6.0e-214 748.4 771 54.0
Sp1g23990 Schrenkiella parvula HOM05D001879 ORTHO05D007957 7.8e-214 748.0 794 52.8
AT1G27752 Arabidopsis thaliana HOM05D001879 ORTHO05D007957 3.0e-213 746.1 817 52.1
EL10Ac1g02390 Beta vulgaris HOM05D001879 ORTHO05D007957 6.6e-213 745.0 814 51.5
AL1G41290 Arabidopsis lyrata HOM05D001879 ORTHO05D007957 1.5e-212 743.8 808 51.9
Ah.05g167110 Amaranthus hybridus HOM05D001879 ORTHO05D007957 4.7e-211 738.8 788 53.2
Carub.0001s2627 Capsella rubella HOM05D001879 ORTHO05D007957 4.0e-210 735.7 792 52.0
Sc26g0004180 Simmondsia chinensis HOM05D001879 ORTHO05D007957 5.2e-210 735.3 776 52.7
Thhalv10006764m.g Eutrema salsugineum HOM05D001879 ORTHO05D007957 6.8e-210 734.9 784 52.0
A08p26070 Brassica napus HOM05D001879 ORTHO05D007957 8.9e-210 734.6 766 53.4
Prupe.1G423800 Prunus persica HOM05D001879 ORTHO05D007957 2.6e-209 733.0 901 51.8
BraA08t34557Z Brassica rapa HOM05D001879 ORTHO05D007957 4.4e-209 732.3 766 53.3
Hund05306 Selenicereus undatus HOM05D001879 ORTHO05D007957 5.8e-209 731.9 887 49.5
Cpa.g.sc142.17 Carica papaya HOM05D001879 ORTHO05D007957 1.7e-208 730.3 918 51.4
C03p74580 Brassica napus HOM05D001879 ORTHO05D007957 6.4e-208 728.4 793 52.1
BolC3t19706H Brassica oleracea HOM05D001879 ORTHO05D007957 1.4e-207 727.2 808 51.2
AUR62038791 Chenopodium quinoa HOM05D001879 ORTHO05D007957 1.2e-206 724.2 830 51.7
Aa31sc113G40 Aethionema arabicum HOM05D001879 ORTHO05D007957 2.7e-206 723.0 795 49.9
THA.LOC104812592 Tarenaya hassleriana HOM05D001879 ORTHO05D007957 3.5e-206 722.6 925 47.4
Aqoxy6G02668 Aquilegia oxysepala HOM05D001879 ORTHO05D007957 4.7e-203 712.2 774 51.0
Ciclev10003334m.g Citrus clementina HOM05D001879 ORTHO05D007648 6.0e-198 695.3 900 47.8
PSO541G1802 Papaver somniferum HOM05D001879 ORTHO05D007957 1.3e-197 694.1 761 51.2
Nn1g04585 Nelumbo nucifera HOM05D001879 ORTHO05D007957 8.6e-197 691.4 830 50.1
BcaC01g01572 Brassica carinata HOM05D001879 ORTHO05D007957 6.8e-194 681.8 808 49.8
PSO675G4263 Papaver somniferum HOM05D001879 ORTHO05D007957 5.8e-193 678.7 837 47.8
SalBow8G5177 Salvia bowleyana HOM05D001879 ORTHO05D007957 9.9e-193 677.9 903 47.1
CDE02G0795 Ceratophyllum demersum HOM05D001879 ORTHO05D007957 8.7e-189 664.8 696 52.6
unitig_578.g16146 Utricularia gibba HOM05D001879 ORTHO05D007957 5.8e-185 652.1 777 48.9
ATR0208G030 Amborella trichopoda HOM05D001879 ORTHO05D007957 4.5e-177 625.9 785 46.4
PGSC0003DMG400021524 Solanum tuberosum HOM05D001879 ORTHO05D007957 5.4e-175 619.0 650 54.0
Zm00001eb007600 Zea mays HOM05D001879 ORTHO05D007957 3.8e-168 596.3 806 44.3
Sed0020869 Sechium edule HOM05D001879 ORTHO05D007957 1.6e-166 590.9 733 48.6
Os03g0205000 Oryza sativa ssp. japonica HOM05D001879 ORTHO05D007957 4.3e-164 582.8 761 44.9
Thecc.08G089900 Theobroma cacao HOM05D001879 ORTHO05D007957 7.1e-159 565.5 626 52.7
Atru.chr13.820 Acer truncatum HOM05D001879 ORTHO05D007648 2.6e-153 547.0 449 63.3
HPP92_009537 Vanilla planifolia HOM05D001879 ORTHO05D007957 4.5e-153 546.2 683 46.3
TAR381G0637 Trochodendron aralioides HOM05D001879 ORTHO05D007957 1.1e-148 531.6 455 61.5
CARHR027270 Cardamine hirsuta HOM05D001879 ORTHO05D007957 1.3e-144 518.1 574 49.3
CSS0023334 Camellia sinensis var. sinensis HOM05D001879 ORTHO05D007957 2.9e-144 516.9 411 63.7
DCAR_009884 Daucus carota HOM05D001879 ORTHO05D007957 1.4e-133 481.5 813 41.6
Peaxi162Scf00081g00176 Petunia axillaris HOM05D001879 ORTHO05D007957 1.4e-122 444.9 531 48.8
Haze_22326 Corylus avellana HOM05D001879 ORTHO05D007957 5.2e-117 426.4 498 50.8
MD03G1160700 Malus domestica HOM05D001879 ORTHO05D007957 5.9e-113 412.9 396 55.6
Mapoly0067s0042 Marchantia polymorpha HOM05D001879 ORTHO05D007957 7.8e-105 386.0 732 35.1
CANSAT25G3038 Cannabis sativa HOM05D001879 ORTHO05D007957 3.6e-86 323.9 222 69.8
SHI08396 Sapria himalayana HOM05D001879 ORTHO05D007957 1.4e-85 322.0 444 43.5
SMO347G0602 Selaginella moellendorffii HOM05D001879 ORTHO05D007957 6.6e-80 303.1 691 33.4
Pp3c2_23190 Physcomitrium patens HOM05D001879 ORTHO05D007957 1.5e-76 292.0 581 32.9
AagrBONN_evm.TU.Sc2ySwM_362.2893 Anthoceros agrestis HOM05D001879 ORTHO05D007957 7.6e-76 289.7 672 30.7
TAR381G1515 Trochodendron aralioides HOM05D001879 ORTHO05D007957 1.3e-67 262.3 329 50.2
CBR_g57086 Chara braunii HOM05D001879 ORTHO05D007957 4.3e-63 247.3 1019 25.0
Haze_22325 Corylus avellana HOM05D001879 ORTHO05D007957 1.8e-56 225.3 220 58.6
SEGI_28261 Sequoiadendron giganteum HOM05D001879 ORTHO05D007957 1.5e-55 222.2 282 45.4
BraA09t40950Z Brassica rapa HOM05D001879 ORTHO05D007957 2.7e-49 201.4 128 75.0
SHI08398 Sapria himalayana HOM05D001879 ORTHO05D007957 8.5e-35 153.3 193 46.6
Atru.chr13.821 Acer truncatum HOM05D001879 ORTHO05D007957 4.1e-29 134.4 285 43.9
HanXRQChr05g0145561 Helianthus annuus HOM05D001879 ORTHO05D007957 9.1e-29 133.3 64 98.4
CSS0041216 Camellia sinensis var. sinensis HOM05D001879 ORTHO05D007957 5.1e-24 117.5 148 48.0
SHI08400 Sapria himalayana HOM05D001879 ORTHO05D007957 3.6e-17 94.7 94 55.3
Cfa000625 Carpinus fangiana HOM05D001879 ORTHO05D007957 1.1e-15 89.7 159 44.7
HPP92_009536 Vanilla planifolia HOM05D001879 ORTHO05D007957 1.1e-13 83.2 93 49.5
C05p26450 Brassica napus HOM05D001879 ORTHO05D007957 2.2e-11 75.5 54 68.5
BolC5t31366H Brassica oleracea HOM05D001879 ORTHO05D007957 2.2e-11 75.5 54 68.5
Cre13.g568750 Chlamydomonas reinhardtii HOM05D001879 ORTHO05D007957 8.5e-11 73.6 60 55.0
Cfa010565 Carpinus fangiana HOM05D001879 ORTHO05D007957 3.2e-10 71.6 108 49.1
MCO02G333 Micromonas commoda HOM05D001879 ORTHO05D007957 3.2e-10 71.6 759 22.7
AagrBONN_evm.TU.Sc2ySwM_368.1487 Anthoceros agrestis HOM05D001879 ORTHO05D007957 6.8e-08 63.9 72 45.8


User provided reference genes

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