Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr01g0024671 Helianthus annuus HOM05D000319 ORTHO05D003924 1.8e-26 121.7 58 100.0
Aa31LG9G6710 Aethionema arabicum HOM05D000319 ORTHO05D003924 3.0e-24 114.4 57 93.0
HanXRQChr04g0114291 Helianthus annuus HOM05D000319 ORTHO05D003924 5.0e-24 113.6 57 94.7
Peaxi162Scf00307g00095 Petunia axillaris HOM05D000319 ORTHO05D003924 5.0e-24 113.6 57 94.7
SGA_v2.0_scaffold106G30654 Striga asiatica HOM05D000319 ORTHO05D003924 1.1e-23 112.5 57 93.0
SGA_v2.0_scaffold51G18637 Striga asiatica HOM05D000319 ORTHO05D003924 1.1e-23 112.5 57 93.0
CDE02G3451 Ceratophyllum demersum HOM05D000319 ORTHO05D003924 1.5e-23 112.1 57 91.2
Atru.chr10.1215 Acer truncatum HOM05D000319 ORTHO05D003924 1.9e-23 111.7 57 93.0
Actinidia16707 Actinidia chinensis HOM05D000319 ORTHO05D003924 1.9e-23 111.7 57 93.0
Actinidia27541 Actinidia chinensis HOM05D000319 ORTHO05D003924 1.9e-23 111.7 57 93.0
Actinidia33698 Actinidia chinensis HOM05D000319 ORTHO05D003924 1.9e-23 111.7 57 93.0
ATR1098G147 Amborella trichopoda HOM05D000319 ORTHO05D003924 1.9e-23 111.7 57 93.0
arahy.Tifrunner.gnm1.ann1.0GN70T Arachis hypogaea HOM05D000319 ORTHO05D003924 1.9e-23 111.7 57 93.0
arahy.Tifrunner.gnm1.ann1.503TH3 Arachis hypogaea HOM05D000319 ORTHO05D003924 1.9e-23 111.7 57 93.0
arahy.Tifrunner.gnm1.ann1.K9BQ1G Arachis hypogaea HOM05D000319 ORTHO05D003924 1.9e-23 111.7 57 93.0
arahy.Tifrunner.gnm1.ann1.XPBU9Q Arachis hypogaea HOM05D000319 ORTHO05D003924 1.9e-23 111.7 57 93.0
MSTRG.14776 Avicennia marina HOM05D000319 ORTHO05D003924 1.9e-23 111.7 57 93.0
Cpa.g.sc166.1 Carica papaya HOM05D000319 ORTHO05D003924 1.9e-23 111.7 57 93.0
CiPaw.10G091300 Carya illinoinensis HOM05D000319 ORTHO05D003924 1.9e-23 111.7 57 93.0
Ciclev10014310m.g Citrus clementina HOM05D000319 ORTHO05D003924 1.9e-23 111.7 57 93.0
Haze_05612 Corylus avellana HOM05D000319 ORTHO05D003924 1.9e-23 111.7 57 93.0
Dinv30756 Davidia involucrata HOM05D000319 ORTHO05D003924 1.9e-23 111.7 57 93.0
ECA236G0438 Erigeron canadensis HOM05D000319 ORTHO05D003924 1.9e-23 111.7 57 93.0
Glyma.13G218600 Glycine max HOM05D000319 ORTHO05D003924 1.9e-23 111.7 57 93.0
Glyma.15G093600 Glycine max HOM05D000319 ORTHO05D003924 1.9e-23 111.7 57 93.0
HanXRQChr15g0480871 Helianthus annuus HOM05D000319 ORTHO05D003924 1.9e-23 111.7 57 93.0
Lsat_1_v5_gn_7_28440 Lactuca sativa HOM05D000319 ORTHO05D003924 1.9e-23 111.7 57 93.0
MBI02_g35823_MAGBIO Magnolia biondii HOM05D000319 ORTHO05D003924 1.9e-23 111.7 57 93.0
MD05G1283200 Malus domestica HOM05D000319 ORTHO05D003924 1.9e-23 111.7 57 93.0
Manes.15G122100 Manihot esculenta HOM05D000319 ORTHO05D003924 1.9e-23 111.7 57 93.0
Manes.17G070701 Manihot esculenta HOM05D000319 ORTHO05D003924 1.9e-23 111.7 57 93.0
Nn3g20828 Nelumbo nucifera HOM05D000319 ORTHO05D003924 1.9e-23 111.7 57 93.0
Nn4g26557 Nelumbo nucifera HOM05D000319 ORTHO05D003924 1.9e-23 111.7 57 93.0
Nitab4.5_0000717g0060 Nicotiana tabacum HOM05D000319 ORTHO05D003924 1.9e-23 111.7 57 93.0
Nitab4.5_0006498g0010 Nicotiana tabacum HOM05D000319 ORTHO05D003924 1.9e-23 111.7 57 93.0
Nitab4.5_0028708g0010 Nicotiana tabacum HOM05D000319 ORTHO05D003924 1.9e-23 111.7 57 93.0
Phvul.006G165300 Phaseolus vulgaris HOM05D000319 ORTHO05D003924 1.9e-23 111.7 57 93.0
Potri.004G132900 Populus trichocarpa HOM05D000319 ORTHO05D003924 1.9e-23 111.7 57 93.0
Potri.011G084400 Populus trichocarpa HOM05D000319 ORTHO05D003924 1.9e-23 111.7 57 93.0
Prupe.4G081400 Prunus persica HOM05D000319 ORTHO05D003924 1.9e-23 111.7 57 93.0
QL11p052014 Quercus lobata HOM05D000319 ORTHO05D003924 1.9e-23 111.7 57 93.0
QL11p052236 Quercus lobata HOM05D000319 ORTHO05D003924 1.9e-23 111.7 57 93.0
Sabra04G0085100 Salix brachista HOM05D000319 ORTHO05D003924 1.9e-23 111.7 57 93.0
TWI53G0954 Tripterygium wilfordii HOM05D000319 ORTHO05D003924 1.9e-23 111.7 57 93.0
TWI73G0864 Tripterygium wilfordii HOM05D000319 ORTHO05D003924 1.9e-23 111.7 57 93.0
TAR624G1128 Trochodendron aralioides HOM05D000319 ORTHO05D003924 1.9e-23 111.7 57 93.0
vmacro10958 Vaccinium macrocarpon HOM05D000319 ORTHO05D003924 1.9e-23 111.7 57 93.0
VMungo0540G0819 Vigna mungo HOM05D000319 ORTHO05D003924 1.9e-23 111.7 57 93.0
GSVIVG01021502001 Vitis vinifera HOM05D000319 ORTHO05D003924 1.9e-23 111.7 57 93.0
CANSAT35G1549 Cannabis sativa HOM05D000319 ORTHO05D003924 2.5e-23 111.3 57 91.2
Gohir.D10G042300 Gossypium hirsutum HOM05D000319 ORTHO05D003924 2.5e-23 111.3 57 91.2
Gorai.011G044900 Gossypium raimondii HOM05D000319 ORTHO05D003924 2.5e-23 111.3 57 91.2
Sopen02g019550 Solanum pennellii HOM05D000319 ORTHO05D003924 2.5e-23 111.3 57 91.2
Ah.14g086430 Amaranthus hybridus HOM05D000319 ORTHO05D003924 4.3e-23 110.5 57 91.2
Aqoxy1G01695 Aquilegia oxysepala HOM05D000319 ORTHO05D003924 4.3e-23 110.5 57 91.2
EL10Ac8g19675 Beta vulgaris HOM05D000319 ORTHO05D003924 4.3e-23 110.5 57 91.2
CSS0010305 Camellia sinensis var. sinensis HOM05D000319 ORTHO05D003924 4.3e-23 110.5 57 91.2
CSS0033707 Camellia sinensis var. sinensis HOM05D000319 ORTHO05D003924 4.3e-23 110.5 57 91.2
CAN.G39.2 Capsicum annuum HOM05D000319 ORTHO05D003924 4.3e-23 110.5 57 91.2
CDE08G0075 Ceratophyllum demersum HOM05D000319 ORTHO05D003924 4.3e-23 110.5 57 89.5
Ca_00538_v3 Cicer arietinum L. HOM05D000319 ORTHO05D003924 4.3e-23 110.5 57 91.2
COL.COLO4_31063 Corchorus olitorius HOM05D000319 ORTHO05D003924 4.3e-23 110.5 57 91.2
DCAR_007888 Daucus carota HOM05D000319 ORTHO05D003924 4.3e-23 110.5 57 91.2
Duzib160G0315 Durio zibethinus HOM05D000319 ORTHO05D003924 4.3e-23 110.5 57 91.2
Duzib192G0511 Durio zibethinus HOM05D000319 ORTHO05D003924 4.3e-23 110.5 57 91.2
Duzib235G0530 Durio zibethinus HOM05D000319 ORTHO05D003924 4.3e-23 110.5 57 91.2
Migut.H01359 Erythranthe guttata HOM05D000319 ORTHO05D003924 4.3e-23 110.5 57 91.2
FvH4_3g05480 Fragaria vesca HOM05D000319 ORTHO05D003924 4.3e-23 110.5 57 91.2
FAN11G4009 Fragaria x ananassa HOM05D000319 ORTHO05D003924 4.3e-23 110.5 57 91.2
FAN16G3086 Fragaria x ananassa HOM05D000319 ORTHO05D003924 4.3e-23 110.5 57 91.2
FAN21G3114 Fragaria x ananassa HOM05D000319 ORTHO05D003924 4.3e-23 110.5 57 91.2
FAN25G0737 Fragaria x ananassa HOM05D000319 ORTHO05D003924 4.3e-23 110.5 57 91.2
Glyma.05G140800 Glycine max HOM05D000319 ORTHO05D003924 4.3e-23 110.5 57 91.2
Gohir.A06G137800 Gossypium hirsutum HOM05D000319 ORTHO05D003924 4.3e-23 110.5 57 91.2
Lj1A1191G70 Lonicera japonica HOM05D000319 ORTHO05D003924 4.3e-23 110.5 57 91.2
Lj6g0003521 Lotus japonicus HOM05D000319 ORTHO05D003924 4.3e-23 110.5 57 91.2
Lalb_Chr20g0117891 Lupinus albus HOM05D000319 ORTHO05D003924 4.3e-23 110.5 57 91.2
MD10G1261500 Malus domestica HOM05D000319 ORTHO05D003924 4.3e-23 110.5 57 91.2
Medtr2g019260 Medicago truncatula HOM05D000319 ORTHO05D003924 4.3e-23 110.5 57 91.2
PSO541G2488 Papaver somniferum HOM05D000319 ORTHO05D003924 4.3e-23 110.5 57 91.2
PSO675G5949 Papaver somniferum HOM05D000319 ORTHO05D003924 4.3e-23 110.5 57 91.2
Psat1g188720 Pisum sativum HOM05D000319 ORTHO05D003924 4.3e-23 110.5 57 91.2
PGR042G1498 Punica granatum HOM05D000319 ORTHO05D003924 4.3e-23 110.5 57 91.2
Rhsim02G0158900 Rhododendron simsii HOM05D000319 ORTHO05D003924 4.3e-23 110.5 57 91.2
RcHm_v2.0_Chr5g0014271 Rosa chinensis HOM05D000319 ORTHO05D003924 4.3e-23 110.5 57 91.2
Sabra11G0066900 Salix brachista HOM05D000319 ORTHO05D003924 4.3e-23 110.5 57 91.2
SalBow7G1096 Salvia bowleyana HOM05D000319 ORTHO05D003924 4.3e-23 110.5 57 91.2
Hund17814 Selenicereus undatus HOM05D000319 ORTHO05D003924 4.3e-23 110.5 57 91.2
Sc05g0006170 Simmondsia chinensis HOM05D000319 ORTHO05D003924 4.3e-23 110.5 57 91.2
Sc24g0001770 Simmondsia chinensis HOM05D000319 ORTHO05D003924 4.3e-23 110.5 57 91.2
Solyc02g021470.4 Solanum lycopersicum HOM05D000319 ORTHO05D003924 4.3e-23 110.5 57 91.2
Sopen02g005950 Solanum pennellii HOM05D000319 ORTHO05D003924 4.3e-23 110.5 57 91.2
Thecc.06G149700 Theobroma cacao HOM05D000319 ORTHO05D003924 4.3e-23 110.5 57 91.2
TPR.G26227 Trifolium pratense HOM05D000319 ORTHO05D003924 4.3e-23 110.5 57 91.2
TAR627G0327 Trochodendron aralioides HOM05D000319 ORTHO05D003924 4.3e-23 110.5 57 91.2
HPP92_019548 Vanilla planifolia HOM05D000319 ORTHO05D003924 4.3e-23 110.5 57 91.2
AT5G46210 Arabidopsis thaliana HOM05D000319 ORTHO05D003924 5.6e-23 110.2 57 89.5
BcaB07g30848 Brassica carinata HOM05D000319 ORTHO05D003924 5.6e-23 110.2 57 89.5
BcaC04g21717 Brassica carinata HOM05D000319 ORTHO05D003924 5.6e-23 110.2 57 89.5
A09p22170 Brassica napus HOM05D000319 ORTHO05D003924 5.6e-23 110.2 57 89.5
C07p29430 Brassica napus HOM05D000319 ORTHO05D003924 5.6e-23 110.2 57 89.5
C09p28330 Brassica napus HOM05D000319 ORTHO05D003924 5.6e-23 110.2 57 89.5
BolC7t43491H Brassica oleracea HOM05D000319 ORTHO05D003924 5.6e-23 110.2 57 89.5
BolC9t55708H Brassica oleracea HOM05D000319 ORTHO05D003924 5.6e-23 110.2 57 89.5
BraA09t37822Z Brassica rapa HOM05D000319 ORTHO05D003924 5.6e-23 110.2 57 89.5
CSS0009461 Camellia sinensis var. sinensis HOM05D000319 ORTHO05D003924 5.6e-23 110.2 57 89.5
CSS0037482 Camellia sinensis var. sinensis HOM05D000319 ORTHO05D003924 5.6e-23 110.2 57 89.5
Carub.0008s0171 Capsella rubella HOM05D000319 ORTHO05D003924 5.6e-23 110.2 57 89.5
CARHR175580 Cardamine hirsuta HOM05D000319 ORTHO05D003924 5.6e-23 110.2 57 89.5
Thhalv10000782m.g Eutrema salsugineum HOM05D000319 ORTHO05D003924 5.6e-23 110.2 57 89.5
Rhsim13G0114000 Rhododendron simsii HOM05D000319 ORTHO05D003924 5.6e-23 110.2 57 89.5
Sp2g11070 Schrenkiella parvula HOM05D000319 ORTHO05D003924 5.6e-23 110.2 57 89.5
Solyc02g070460.3 Solanum lycopersicum HOM05D000319 ORTHO05D003924 5.6e-23 110.2 57 89.5
ClCG03G006820 Citrullus lanatus HOM05D000319 ORTHO05D003924 7.3e-23 109.8 57 91.2
MELO3C002738.2 Cucumis melo HOM05D000319 ORTHO05D003924 7.3e-23 109.8 57 91.2
CsaV3_1G032400 Cucumis sativus L. HOM05D000319 ORTHO05D003924 7.3e-23 109.8 57 91.2
Gohir.A10G041500 Gossypium hirsutum HOM05D000319 ORTHO05D003924 7.3e-23 109.8 57 89.5
Sed0009613 Sechium edule HOM05D000319 ORTHO05D003924 7.3e-23 109.8 57 91.2
Sed0018157 Sechium edule HOM05D000319 ORTHO05D003924 7.3e-23 109.8 57 91.2
Aa31LG6G1000 Aethionema arabicum HOM05D000319 ORTHO05D003924 9.5e-23 109.4 57 89.5
CiPaw.09G122800 Carya illinoinensis HOM05D000319 ORTHO05D003924 9.5e-23 109.4 57 91.2
THA.LOC104806130 Tarenaya hassleriana HOM05D000319 ORTHO05D003924 9.5e-23 109.4 57 89.5
Zm00001eb059990 Zea mays HOM05D000319 ORTHO05D003924 9.5e-23 109.4 57 89.5
Zm00001eb213380 Zea mays HOM05D000319 ORTHO05D003924 9.5e-23 109.4 57 89.5
AL8G12250 Arabidopsis lyrata HOM05D000319 ORTHO05D003924 1.2e-22 109.0 57 87.7
Lalb_Chr18g0055391 Lupinus albus HOM05D000319 ORTHO05D003924 1.2e-22 109.0 57 91.2
TWI09G0761 Tripterygium wilfordii HOM05D000319 ORTHO05D003924 1.2e-22 109.0 57 91.2
Ah.09g232590 Amaranthus hybridus HOM05D000319 ORTHO05D003924 1.6e-22 108.6 57 89.5
MSTRG.13254 Avicennia marina HOM05D000319 ORTHO05D003924 1.6e-22 108.6 57 89.5
A06p46090 Brassica napus HOM05D000319 ORTHO05D003924 1.6e-22 108.6 57 89.5
BraA06t27474Z Brassica rapa HOM05D000319 ORTHO05D003924 1.6e-22 108.6 57 89.5
AUR62002747 Chenopodium quinoa HOM05D000319 ORTHO05D003924 1.6e-22 108.6 57 89.5
AUR62030195 Chenopodium quinoa HOM05D000319 ORTHO05D003924 1.6e-22 108.6 57 89.5
Lj2A304T50 Lonicera japonica HOM05D000319 ORTHO05D003924 1.6e-22 108.6 57 89.5
TAR626G0281 Trochodendron aralioides HOM05D000319 ORTHO05D003924 1.6e-22 108.6 57 91.2
Gohir.D06G143000 Gossypium hirsutum HOM05D000319 ORTHO05D003924 2.8e-22 107.8 57 89.5
Gorai.010G166800 Gossypium raimondii HOM05D000319 ORTHO05D003924 2.8e-22 107.8 57 89.5
Hma1.2p1_0020F.1_g014000 Hydrangea macrophylla HOM05D000319 ORTHO05D003924 2.8e-22 107.8 57 87.7
Oeu030933.1 Olea europaea HOM05D000319 ORTHO05D003924 2.8e-22 107.8 57 89.5
SMO134G0287 Selaginella moellendorffii HOM05D000319 ORTHO05D003924 2.8e-22 107.8 57 86.0
vmacro03331 Vaccinium macrocarpon HOM05D000319 ORTHO05D003924 2.8e-22 107.8 57 87.7
BcaC03g16838 Brassica carinata HOM05D000319 ORTHO05D003924 3.6e-22 107.5 57 87.7
A02p29760 Brassica napus HOM05D000319 ORTHO05D003924 3.6e-22 107.5 57 87.7
C02p47170 Brassica napus HOM05D000319 ORTHO05D003924 3.6e-22 107.5 57 87.7
BolC2t10761H Brassica oleracea HOM05D000319 ORTHO05D003924 3.6e-22 107.5 57 87.7
BraA02t07998Z Brassica rapa HOM05D000319 ORTHO05D003924 3.6e-22 107.5 57 87.7
Eucgr.E02414 Eucalyptus grandis HOM05D000319 ORTHO05D003924 3.6e-22 107.5 57 87.7
Gohir.A06G196800 Gossypium hirsutum HOM05D000319 ORTHO05D003924 3.6e-22 107.5 57 89.5
Gorai.010G238300 Gossypium raimondii HOM05D000319 ORTHO05D003924 3.6e-22 107.5 57 89.5
Oeu031275.1 Olea europaea HOM05D000319 ORTHO05D003924 3.6e-22 107.5 57 89.5
Glyma.08G096100 Glycine max HOM05D000319 ORTHO05D003924 4.7e-22 107.1 57 87.7
Gohir.D06G204300 Gossypium hirsutum HOM05D000319 ORTHO05D003924 4.7e-22 107.1 57 87.7
Mapoly0043s0127 Marchantia polymorpha HOM05D000319 ORTHO05D003924 4.7e-22 107.1 57 87.7
Pp3c3_20200 Physcomitrium patens HOM05D000319 ORTHO05D003924 4.7e-22 107.1 57 87.7
SHI24899 Sapria himalayana HOM05D000319 ORTHO05D003924 4.7e-22 107.1 57 87.7
CBR_g54200 Chara braunii HOM05D000319 ORTHO05D003924 6.2e-22 106.7 57 86.0
Oeu034142.3 Olea europaea HOM05D000319 ORTHO05D003924 6.2e-22 106.7 57 87.7
Pp3c4_7910 Physcomitrium patens HOM05D000319 ORTHO05D003924 6.2e-22 106.7 57 86.0
unitig_0.g929 Utricularia gibba HOM05D000319 ORTHO05D003924 6.2e-22 106.7 57 87.7
Actinidia07702 Actinidia chinensis HOM05D000319 ORTHO05D003924 8.0e-22 106.3 57 87.7
Thhalv10024458m.g Eutrema salsugineum HOM05D000319 ORTHO05D003924 1.4e-21 105.5 57 86.0
Sp7g15740 Schrenkiella parvula HOM05D000319 ORTHO05D003924 1.4e-21 105.5 57 86.0
unitig_61.g26081 Utricularia gibba HOM05D000319 ORTHO05D003924 1.4e-21 105.5 57 87.7
AagrBONN_evm.TU.Sc2ySwM_344.1299 Anthoceros agrestis HOM05D000319 ORTHO05D003924 2.3e-21 104.8 57 86.0
Pp3c12_14490 Physcomitrium patens HOM05D000319 ORTHO05D003924 4.0e-21 104.0 57 86.0
HanXRQChr07g0200821 Helianthus annuus HOM05D000319 ORTHO05D003924 5.4e-18 93.6 44 95.5
CAN.G702.31 Capsicum annuum HOM05D000319 ORTHO05D003924 4.6e-17 90.5 47 87.2
PRCOL_00005444 Prasinoderma coloniale HOM05D000319 ORTHO05D003924 4.7e-14 80.5 58 67.2
Aa31LG6G1040 Aethionema arabicum HOM05D000319 ORTHO05D003924 1.2e-12 75.9 42 81.0
MCO13G363 Micromonas commoda HOM05D000319 ORTHO05D003924 2.2e-11 71.6 58 58.6
Cre12.g516500 Chlamydomonas reinhardtii HOM05D000319 ORTHO05D003924 4.9e-11 70.5 56 57.1
Haze_27236 Corylus avellana HOM05D000319 ORTHO05D003924 7.8e-09 63.2 57 52.6
Lsat_1_v5_gn_7_84401 Lactuca sativa HOM05D000319 ORTHO05D003924 1.2e-06 55.8 28 85.7
Dinv32244 Davidia involucrata HOM05D000319 ORTHO05D003924 2.8e-06 54.7 57 57.9
Peaxi162Scf00417g00411 Petunia axillaris HOM05D000319 ORTHO05D003924 3.6e-06 54.3 58 50.0
Peaxi162Scf00026g03215 Petunia axillaris HOM05D000319 ORTHO05D002646 8.1e-06 53.1 50 46.0


User provided reference genes

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