Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr01g0023901 Helianthus annuus HOM05D004315 ORTHO05D005089 1.4e-204 716.1 354 100.0
ECA248G0068 Erigeron canadensis HOM05D004315 ORTHO05D005089 3.5e-184 648.3 349 90.5
Lsat_1_v5_gn_2_30700 Lactuca sativa HOM05D004315 ORTHO05D005089 6.6e-159 564.3 350 80.3
GSVIVG01020802001 Vitis vinifera HOM05D004315 ORTHO05D005089 9.5e-158 560.5 349 79.4
MBI18_g11296_MAGBIO Magnolia biondii HOM05D004315 ORTHO05D005089 2.1e-157 559.3 351 79.8
Dinv05044 Davidia involucrata HOM05D004315 ORTHO05D005089 4.7e-157 558.1 349 81.4
TAR629G1010 Trochodendron aralioides HOM05D004315 ORTHO05D005089 8.9e-156 553.9 350 79.1
Hma1.2p1_0583F.1_g183050 Hydrangea macrophylla HOM05D004315 ORTHO05D005089 1.3e-154 550.1 349 79.4
DCAR_013332 Daucus carota HOM05D004315 ORTHO05D005089 3.7e-154 548.5 351 77.2
Eucgr.A00888 Eucalyptus grandis HOM05D004315 ORTHO05D005089 4.1e-153 545.0 348 79.0
HanXRQChr14g0432981 Helianthus annuus HOM05D004315 ORTHO05D005089 7.0e-153 544.3 354 77.1
HanXRQChr04g0115031 Helianthus annuus HOM05D004315 ORTHO05D005089 9.2e-153 543.9 354 77.4
RcHm_v2.0_Chr2g0152961 Rosa chinensis HOM05D004315 ORTHO05D005089 2.0e-152 542.7 349 77.4
CSS0039894 Camellia sinensis var. sinensis HOM05D004315 ORTHO05D005089 2.7e-152 542.3 348 77.9
Ciclev10031991m.g Citrus clementina HOM05D004315 ORTHO05D005089 3.5e-152 542.0 343 78.4
Nn3g20219 Nelumbo nucifera HOM05D004315 ORTHO05D005089 6.0e-152 541.2 352 77.3
FvH4_6g39150 Fragaria vesca HOM05D004315 ORTHO05D005089 1.0e-151 540.4 349 77.4
FAN14G1093 Fragaria x ananassa HOM05D004315 ORTHO05D005089 1.0e-151 540.4 349 77.4
MD09G1144800 Malus domestica HOM05D004315 ORTHO05D005089 1.3e-151 540.0 349 76.8
Thecc.01G165100 Theobroma cacao HOM05D004315 ORTHO05D005089 3.9e-151 538.5 348 79.0
FAN05G3231 Fragaria x ananassa HOM05D004315 ORTHO05D005089 5.0e-151 538.1 349 76.8
MD17G1131300 Malus domestica HOM05D004315 ORTHO05D005089 6.6e-151 537.7 349 77.1
Prupe.3G183100 Prunus persica HOM05D004315 ORTHO05D005089 3.3e-150 535.4 349 76.2
CiPaw.03G190700 Carya illinoinensis HOM05D004315 ORTHO05D005089 7.3e-150 534.3 357 75.6
PGR031G0720 Punica granatum HOM05D004315 ORTHO05D005089 1.2e-149 533.5 349 77.4
Duzib264G0097 Durio zibethinus HOM05D004315 ORTHO05D005089 2.1e-149 532.7 348 78.2
Potri.014G143500 Populus trichocarpa HOM05D004315 ORTHO05D005089 2.1e-149 532.7 349 76.2
Cc05_g00540 Coffea canephora HOM05D004315 ORTHO05D005089 2.8e-149 532.3 358 75.1
CANSAT64G0449 Cannabis sativa HOM05D004315 ORTHO05D005089 1.8e-148 529.6 352 76.1
Aqoxy1G01576 Aquilegia oxysepala HOM05D004315 ORTHO05D005089 2.3e-148 529.3 349 76.8
Gohir.A05G380500 Gossypium hirsutum HOM05D004315 ORTHO05D005089 3.1e-148 528.9 348 78.2
PSO675G7088 Papaver somniferum HOM05D004315 ORTHO05D005089 3.1e-148 528.9 350 75.4
Gorai.012G039600 Gossypium raimondii HOM05D004315 ORTHO05D005089 4.0e-148 528.5 348 78.2
ATR0165G021 Amborella trichopoda HOM05D004315 ORTHO05D005089 6.8e-148 527.7 335 78.5
Nitab4.5_0001843g0170 Nicotiana tabacum HOM05D004315 ORTHO05D005089 1.5e-147 526.6 356 74.7
Glyma.02G281300 Glycine max HOM05D004315 ORTHO05D005089 2.0e-147 526.2 354 75.1
TWI14G0586 Tripterygium wilfordii HOM05D004315 ORTHO05D005089 2.0e-147 526.2 351 75.2
Sopen07g023340 Solanum pennellii HOM05D004315 ORTHO05D005089 4.9e-146 521.5 353 73.7
MBI02_g32064_MAGBIO Magnolia biondii HOM05D004315 ORTHO05D005089 6.4e-146 521.2 336 77.7
TWI59G1372 Tripterygium wilfordii HOM05D004315 ORTHO05D005089 1.1e-145 520.4 351 74.1
LjContig00049g0028236 Lotus japonicus HOM05D004315 ORTHO05D005089 2.4e-145 519.2 350 74.3
arahy.Tifrunner.gnm1.ann1.8V1VF7 Arachis hypogaea HOM05D004315 ORTHO05D005089 3.2e-145 518.8 356 74.7
Medtr5g090130 Medicago truncatula HOM05D004315 ORTHO05D005089 4.1e-145 518.5 349 75.4
Solyc07g044750.3 Solanum lycopersicum HOM05D004315 ORTHO05D005089 5.4e-145 518.1 353 72.8
Peaxi162Scf00351g00818 Petunia axillaris HOM05D004315 ORTHO05D005089 7.1e-145 517.7 354 73.7
CAN.G1316.2 Capsicum annuum HOM05D004315 ORTHO05D005089 6.0e-144 514.6 356 73.0
PGSC0003DMG400021156 Solanum tuberosum HOM05D004315 ORTHO05D005089 6.0e-144 514.6 357 73.1
Psat2g018080 Pisum sativum HOM05D004315 ORTHO05D005089 1.7e-143 513.1 350 73.7
VMungo0647G0619 Vigna mungo HOM05D004315 ORTHO05D005089 3.0e-143 512.3 349 73.4
Migut.H01268 Erythranthe guttata HOM05D004315 ORTHO05D005089 5.1e-143 511.5 353 73.7
Oeu044867.2 Olea europaea HOM05D004315 ORTHO05D005089 5.1e-143 511.5 380 70.5
arahy.Tifrunner.gnm1.ann1.VQL6P1 Arachis hypogaea HOM05D004315 ORTHO05D005089 6.6e-143 511.1 363 73.0
Lalb_Chr10g0106401 Lupinus albus HOM05D004315 ORTHO05D005089 1.5e-142 510.0 348 73.3
Sabra14G0108500 Salix brachista HOM05D004315 ORTHO05D005089 1.5e-142 510.0 363 72.7
TPR.G24734 Trifolium pratense HOM05D004315 ORTHO05D005089 1.5e-142 510.0 354 72.6
vmacro03380 Vaccinium macrocarpon HOM05D004315 ORTHO05D005089 1.5e-142 510.0 353 71.4
GSVIVG01021661001 Vitis vinifera HOM05D004315 ORTHO05D005089 2.1e-141 506.1 345 74.2
MELO3C026388.2 Cucumis melo HOM05D004315 ORTHO05D005089 2.8e-141 505.8 353 72.5
CSS0023242 Camellia sinensis var. sinensis HOM05D004315 ORTHO05D005089 6.2e-141 504.6 356 71.1
SEGI_10868 Sequoiadendron giganteum HOM05D004315 ORTHO05D005089 1.1e-140 503.8 351 72.1
Gohir.D04G035100 Gossypium hirsutum HOM05D004315 ORTHO05D005089 1.4e-140 503.4 330 78.2
Phvul.008G199600 Phaseolus vulgaris HOM05D004315 ORTHO05D005089 2.4e-140 502.7 351 71.8
Potri.011G164500 Populus trichocarpa HOM05D004315 ORTHO05D005089 4.0e-140 501.9 344 74.1
Lj1A584G30 Lonicera japonica HOM05D004315 ORTHO05D005089 1.2e-139 500.4 342 74.6
CiPaw.10G109400 Carya illinoinensis HOM05D004315 ORTHO05D005089 1.5e-139 500.0 327 74.9
Rhsim13G0121900 Rhododendron simsii HOM05D004315 ORTHO05D005089 2.6e-139 499.2 378 68.0
Cfa000809 Carpinus fangiana HOM05D004315 ORTHO05D005089 9.9e-139 497.3 338 73.4
PSO541G6471 Papaver somniferum HOM05D004315 ORTHO05D005089 1.7e-138 496.5 329 75.4
Potri.001G466900 Populus trichocarpa HOM05D004315 ORTHO05D005089 2.9e-138 495.7 337 73.6
MELO3C016194.2 Cucumis melo HOM05D004315 ORTHO05D005089 6.4e-138 494.6 353 70.8
ClCG07G010830 Citrullus lanatus HOM05D004315 ORTHO05D005089 1.4e-137 493.4 350 70.6
Lj2A329G54 Lonicera japonica HOM05D004315 ORTHO05D005089 1.4e-137 493.4 326 73.3
Nitab4.5_0006724g0010 Nicotiana tabacum HOM05D004315 ORTHO05D005089 1.9e-137 493.0 335 74.3
Oeu015176.1 Olea europaea HOM05D004315 ORTHO05D005089 5.4e-137 491.5 332 72.3
Cpa.g.sc1123.2 Carica papaya HOM05D004315 ORTHO05D005089 1.6e-136 490.0 353 69.7
COL.COLO4_29897 Corchorus olitorius HOM05D004315 ORTHO05D005089 1.6e-136 490.0 308 80.5
Oeu041105.1 Olea europaea HOM05D004315 ORTHO05D005089 3.9e-135 485.3 331 71.3
Sed0001791 Sechium edule HOM05D004315 ORTHO05D005089 8.7e-135 484.2 355 69.0
CDE05G3605 Ceratophyllum demersum HOM05D003391 ORTHO05D005563 2.5e-134 482.6 350 68.3
Dinv10789 Davidia involucrata HOM05D004315 ORTHO05D005089 3.3e-134 482.3 328 73.2
ClCG11G016660 Citrullus lanatus HOM05D004315 ORTHO05D005089 4.3e-134 481.9 408 62.7
Cc09_g07890 Coffea canephora HOM05D004315 ORTHO05D005089 5.6e-134 481.5 339 69.6
CsaV3_4G007480 Cucumis sativus L. HOM05D004315 ORTHO05D005089 5.6e-134 481.5 353 68.8
Sabra16G0316700 Salix brachista HOM05D004315 ORTHO05D005089 2.8e-133 479.2 360 68.3
Migut.M01899 Erythranthe guttata HOM05D004315 ORTHO05D005089 3.6e-133 478.8 342 68.7
SalBow8G0183 Salvia bowleyana HOM05D004315 ORTHO05D005089 1.4e-132 476.9 331 68.6
CANSAT35G0713 Cannabis sativa HOM05D004315 ORTHO05D005089 4.0e-132 475.3 345 69.9
Nitab4.5_0000076g0250 Nicotiana tabacum HOM05D004315 ORTHO05D005089 2.0e-131 473.0 338 70.4
Os09g0133700 Oryza sativa ssp. japonica HOM05D004315 ORTHO05D005089 4.4e-131 471.9 343 71.4
CAN.G304.4 Capsicum annuum HOM05D004315 ORTHO05D005089 2.9e-130 469.2 329 70.5
Zm00001eb299940 Zea mays HOM05D004315 ORTHO05D005089 1.9e-129 466.5 349 68.5
Aa31LG10G6590 Aethionema arabicum HOM05D004315 ORTHO05D005089 3.2e-129 465.7 349 66.5
MSTRG.16294 Avicennia marina HOM05D004315 ORTHO05D005089 4.2e-129 465.3 329 69.9
Os07g0147700 Oryza sativa ssp. japonica HOM05D004315 ORTHO05D005089 4.2e-129 465.3 341 70.1
AT1G30540 Arabidopsis thaliana HOM05D004315 ORTHO05D005089 1.2e-128 463.8 321 71.3
BraA09t39115Z Brassica rapa HOM05D004315 ORTHO05D005089 1.6e-128 463.4 341 68.3
Lsat_1_v5_gn_1_91760 Lactuca sativa HOM05D004315 ORTHO05D005089 1.6e-128 463.4 340 67.1
Atru.chr10.841 Acer truncatum HOM05D004315 ORTHO05D005089 2.1e-128 463.0 329 70.8
Carub.0001s2880 Capsella rubella HOM05D004315 ORTHO05D005089 2.1e-128 463.0 345 67.5
Thhalv10008046m.g Eutrema salsugineum HOM05D004315 ORTHO05D005089 2.7e-128 462.6 324 71.0
BcaC05g27075 Brassica carinata HOM05D004315 ORTHO05D005089 6.0e-128 461.5 324 70.7
Sabra11G0140700 Salix brachista HOM05D004315 ORTHO05D005089 7.8e-128 461.1 380 65.3
Sp1g26410 Schrenkiella parvula HOM05D004315 ORTHO05D005089 7.8e-128 461.1 334 68.9
Zm00001eb261810 Zea mays HOM05D004315 ORTHO05D005089 1.0e-127 460.7 327 72.8
Solyc02g023980.3 Solanum lycopersicum HOM05D004315 ORTHO05D005089 1.3e-127 460.3 325 71.1
A09p35900 Brassica napus HOM05D004315 ORTHO05D005089 3.0e-127 459.1 341 67.7
BcaB07g32690 Brassica carinata HOM05D004315 ORTHO05D005089 3.9e-127 458.8 325 70.2
CARHR029950 Cardamine hirsuta HOM05D004315 ORTHO05D005089 5.1e-127 458.4 347 66.0
C05p29560 Brassica napus HOM05D004315 ORTHO05D005089 1.1e-126 457.2 325 70.5
BolC5t31687H Brassica oleracea HOM05D004315 ORTHO05D005089 1.5e-126 456.8 325 70.5
HPP92_005880 Vanilla planifolia HOM05D004315 ORTHO05D005089 2.5e-126 456.1 323 72.4
AL1G44580 Arabidopsis lyrata HOM05D004315 ORTHO05D005089 5.6e-126 454.9 321 70.1
THA.LOC104798598 Tarenaya hassleriana HOM05D004315 ORTHO05D005089 5.6e-126 454.9 371 63.6
Ah.09g232250 Amaranthus hybridus HOM05D004315 ORTHO05D005089 3.6e-125 452.2 333 65.8
Nitab4.5_0011274g0010 Nicotiana tabacum HOM05D004315 ORTHO05D005089 8.1e-125 451.1 316 71.5
SGA_v2.0_scaffold223G42867 Striga asiatica HOM05D004315 ORTHO05D005089 1.4e-124 450.3 356 62.6
Peaxi162Scf00395g00318 Petunia axillaris HOM05D004315 ORTHO05D005089 6.9e-124 448.0 331 68.9
unitig_37.g12072 Utricularia gibba HOM05D004315 ORTHO05D005089 6.9e-124 448.0 337 65.0
Duzib147G0966 Durio zibethinus HOM05D004315 ORTHO05D005089 3.4e-123 445.7 348 67.5
DCAR_007839 Daucus carota HOM05D004315 ORTHO05D005089 9.9e-123 444.1 321 70.1
Actinidia12522 Actinidia chinensis HOM05D004315 ORTHO05D005089 6.4e-122 441.4 331 69.5
PGSC0003DMG401028079 Solanum tuberosum HOM05D004315 ORTHO05D005089 1.9e-121 439.9 307 71.7
SHI10516 Sapria himalayana HOM05D004315 ORTHO05D005089 1.2e-120 437.2 327 66.7
Manes.02G090600 Manihot esculenta HOM05D004315 ORTHO05D005089 6.0e-120 434.9 265 79.6
Atru.chr6.2011 Acer truncatum HOM05D004315 ORTHO05D005089 6.2e-117 424.9 276 78.6
BcaB07g32692 Brassica carinata HOM05D004315 ORTHO05D005089 1.4e-116 423.7 329 66.6
CsaV3_4G032170 Cucumis sativus L. HOM05D004315 ORTHO05D005089 1.8e-116 423.3 353 63.2
QL05p061983 Quercus lobata HOM05D004315 ORTHO05D005089 2.2e-114 416.4 549 44.8
Glyma.14G033300 Glycine max HOM05D004315 ORTHO05D005089 7.1e-113 411.4 269 77.0
Lsat_1_v5_gn_1_77721 Lactuca sativa HOM05D004315 ORTHO05D005089 1.3e-111 407.1 227 88.1
Sed0020733 Sechium edule HOM05D004315 ORTHO05D005089 1.3e-109 400.6 286 72.7
BcaB07g32666 Brassica carinata HOM05D004315 ORTHO05D005089 5.7e-102 375.2 327 61.2
Mapoly0122s0046 Marchantia polymorpha HOM05D004315 ORTHO05D005089 3.1e-100 369.4 346 54.6
SMO334G0132 Selaginella moellendorffii HOM05D004315 ORTHO05D005089 2.9e-98 362.8 336 55.7
Haze_05864 Corylus avellana HOM05D004315 ORTHO05D005089 1.9e-89 333.6 281 62.3
Hma1.2p1_0067F.1_g036960 Hydrangea macrophylla HOM05D004315 ORTHO05D005089 2.1e-88 330.1 206 77.7
Manes.14G123700 Manihot esculenta HOM05D004315 ORTHO05D005089 1.1e-86 324.3 244 65.2
Pp3c17_6390 Physcomitrium patens HOM05D004315 ORTHO05D005089 6.3e-85 318.5 290 56.2
Actinidia01578 Actinidia chinensis HOM05D004315 ORTHO05D005089 3.1e-84 316.2 229 70.7
Haze_05859 Corylus avellana HOM05D004315 ORTHO05D005089 1.7e-82 310.5 267 61.0
Sopen02g006690 Solanum pennellii HOM05D004315 ORTHO05D005089 2.9e-82 309.7 203 77.8
Sc10g0005420 Simmondsia chinensis HOM05D004315 ORTHO05D005089 1.9e-81 307.0 225 69.3
Cfa023542 Carpinus fangiana HOM05D004315 ORTHO05D005089 3.2e-73 279.6 189 73.0
Haze_13622 Corylus avellana HOM05D004315 ORTHO05D005089 2.2e-69 266.9 162 80.2
CBR_g20100 Chara braunii HOM05D004315 ORTHO05D005089 9.4e-65 251.5 375 40.8
Hund21564 Selenicereus undatus HOM05D004315 ORTHO05D005089 2.6e-62 243.4 183 67.2
Actinidia33709 Actinidia chinensis HOM05D004315 ORTHO05D005089 2.0e-59 233.8 165 72.1
QL05p062039 Quercus lobata HOM05D004315 ORTHO05D005089 1.7e-58 230.7 213 57.7
Hund21563 Selenicereus undatus HOM05D004315 ORTHO05D005089 3.8e-58 229.6 165 69.1
Zm00001eb058170 Zea mays HOM05D004315 ORTHO05D005089 6.6e-58 228.8 188 64.9
AagrBONN_evm.TU.Sc2ySwM_117.2193 Anthoceros agrestis HOM05D004315 ORTHO05D005089 1.8e-52 210.7 272 43.8
PRCOL_00003495 Prasinoderma coloniale HOM05D004315 ORTHO05D005089 6.1e-48 195.7 339 39.5
TPR.G1178 Trifolium pratense HOM05D003586 ORTHO05D004036 4.4e-46 189.5 227 50.7
Manes.01G131701 Manihot esculenta HOM05D004315 ORTHO05D005089 1.2e-43 181.4 145 64.8
Manes.01G131702 Manihot esculenta HOM05D004315 ORTHO05D005089 1.9e-36 157.5 112 73.2
SEGI_40766 Sequoiadendron giganteum HOM05D004315 ORTHO05D005089 6.4e-29 132.5 139 51.1
MCO07G054 Micromonas commoda HOM05D004315 ORTHO05D005089 1.3e-26 124.8 382 30.9
Cre17.g720528 Chlamydomonas reinhardtii HOM05D004315 ORTHO05D005089 5.1e-26 122.9 258 32.6
Pp3s34_420 Physcomitrium patens HOM05D000198 ORTHO05D309562 1.8e-23 114.4 302 31.8
SEGI_21833 Sequoiadendron giganteum HOM05D004315 ORTHO05D005089 5.2e-23 112.8 206 36.9
QL04p059944 Quercus lobata HOM05D004315 ORTHO05D005089 1.5e-22 111.3 71 74.6
Atru.chr6.2012 Acer truncatum HOM05D004315 ORTHO05D005089 4.6e-19 99.8 64 73.4
Hma1.2p1_0067F.1_g036930 Hydrangea macrophylla HOM05D004315 ORTHO05D005089 5.1e-18 96.3 57 78.9
Cfa023541 Carpinus fangiana HOM05D004315 ORTHO05D005089 8.7e-18 95.5 56 83.9
TAR624G0620 Trochodendron aralioides HOM05D004315 ORTHO05D005089 2.5e-17 94.0 60 73.3
DCAR_009744 Daucus carota HOM05D004315 ORTHO05D018839 2.6e-14 84.0 86 51.2
Ah.03g146620 Amaranthus hybridus HOM05D004315 ORTHO05D005089 3.6e-08 63.5 56 55.4
CDE04G1567 Ceratophyllum demersum HOM05D001307 ORTHO05D005089 5.3e-07 59.7 79 41.8
Gohir.D08G092932 Gossypium hirsutum HOM05D004315 ORTHO05D217518 2.6e-06 57.4 63 52.4
Cfa023540 Carpinus fangiana HOM05D000112 ORTHO05D001327 5.8e-06 56.2 54 51.9


User provided reference genes

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