Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr01g0018971 Helianthus annuus HOM05D004870 ORTHO05D006061 1.3e-263 912.5 461 100.0
Lsat_1_v5_gn_1_81660 Lactuca sativa HOM05D004870 ORTHO05D006061 8.4e-239 830.1 456 91.7
ECA234G2132 Erigeron canadensis HOM05D004870 ORTHO05D006061 5.1e-236 820.8 462 90.0
CSS0023232 Camellia sinensis var. sinensis HOM05D004870 ORTHO05D006061 1.5e-227 792.7 464 85.1
Actinidia04336 Actinidia chinensis HOM05D004870 ORTHO05D006061 9.6e-227 790.0 462 85.5
Dinv17644 Davidia involucrata HOM05D004870 ORTHO05D006061 1.8e-225 785.8 462 85.7
Dinv25387 Davidia involucrata HOM05D004870 ORTHO05D006061 1.5e-224 782.7 465 86.2
CAN.G282.44 Capsicum annuum HOM05D004870 ORTHO05D006061 1.3e-220 769.6 461 83.9
Sc06g0006850 Simmondsia chinensis HOM05D004870 ORTHO05D006061 1.3e-220 769.6 454 84.6
Solyc01g008290.3 Solanum lycopersicum HOM05D004870 ORTHO05D006061 8.7e-220 766.9 462 83.3
Sopen01g003810 Solanum pennellii HOM05D004870 ORTHO05D006061 1.1e-219 766.5 461 83.1
Potri.005G089700 Populus trichocarpa HOM05D004870 ORTHO05D006061 4.3e-219 764.6 461 82.6
PGSC0003DMG401016396 Solanum tuberosum HOM05D004870 ORTHO05D006061 1.3e-218 763.1 466 82.8
DCAR_026881 Daucus carota HOM05D004870 ORTHO05D006061 2.1e-218 762.3 461 82.4
TAR629G3247 Trochodendron aralioides HOM05D004870 ORTHO05D006061 2.1e-218 762.3 461 83.7
MBI03_g13828_MAGBIO Magnolia biondii HOM05D004870 ORTHO05D006061 3.7e-218 761.5 461 81.8
CiPaw.05G171200 Carya illinoinensis HOM05D004870 ORTHO05D006061 2.9e-215 751.9 461 81.3
QL03p045749 Quercus lobata HOM05D004870 ORTHO05D006061 2.9e-215 751.9 453 82.6
Thecc.02G155600 Theobroma cacao HOM05D004870 ORTHO05D006061 2.9e-215 751.9 431 86.5
Ciclev10031476m.g Citrus clementina HOM05D004870 ORTHO05D006061 8.4e-215 750.4 446 85.0
Prupe.4G061300 Prunus persica HOM05D004870 ORTHO05D006061 8.4e-215 750.4 460 80.4
Sed0016006 Sechium edule HOM05D004870 ORTHO05D006061 2.5e-214 748.8 442 84.6
Gohir.D02G189300 Gossypium hirsutum HOM05D004870 ORTHO05D006061 5.5e-214 747.7 462 81.8
Gorai.005G212000 Gossypium raimondii HOM05D004870 ORTHO05D006061 5.5e-214 747.7 462 81.8
Gohir.A03G166000 Gossypium hirsutum HOM05D004870 ORTHO05D006061 7.1e-214 747.3 462 81.8
Medtr1g114530 Medicago truncatula HOM05D004870 ORTHO05D006061 1.6e-213 746.1 437 84.2
Duzib132G1043 Durio zibethinus HOM05D004870 ORTHO05D006061 3.5e-213 745.0 459 81.7
Glyma.10G286200 Glycine max HOM05D004870 ORTHO05D006061 3.5e-213 745.0 427 85.9
Phvul.007G014700 Phaseolus vulgaris HOM05D004870 ORTHO05D006061 3.5e-213 745.0 427 86.2
Cc11_g00600 Coffea canephora HOM05D004870 ORTHO05D006061 1.0e-212 743.4 466 81.1
arahy.Tifrunner.gnm1.ann1.NQ58Z6 Arachis hypogaea HOM05D004870 ORTHO05D006061 1.8e-212 742.7 454 81.3
arahy.Tifrunner.gnm1.ann1.GVRL8L Arachis hypogaea HOM05D004870 ORTHO05D006061 3.9e-212 741.5 454 81.3
Haze_11781 Corylus avellana HOM05D004870 ORTHO05D006061 3.9e-212 741.5 469 80.0
SGA_v2.0_scaffold91G28011 Striga asiatica HOM05D004870 ORTHO05D006061 3.9e-212 741.5 469 81.4
Lalb_Chr02g0143631 Lupinus albus HOM05D004870 ORTHO05D006061 5.1e-212 741.1 441 83.7
Manes.15G107800 Manihot esculenta HOM05D004870 ORTHO05D006061 5.1e-212 741.1 461 80.7
Eucgr.I02621 Eucalyptus grandis HOM05D004870 ORTHO05D006061 8.7e-212 740.3 443 82.6
DCAR_002602 Daucus carota HOM05D004870 ORTHO05D006061 1.1e-211 740.0 483 77.4
TPR.G4052 Trifolium pratense HOM05D004870 ORTHO05D006061 1.1e-211 740.0 447 81.7
SalBow5G5328 Salvia bowleyana HOM05D004870 ORTHO05D006061 1.5e-211 739.6 467 79.7
VMungo0720G1992 Vigna mungo HOM05D004870 ORTHO05D006061 1.5e-211 739.6 427 85.5
Migut.N00083 Erythranthe guttata HOM05D004870 ORTHO05D006061 1.9e-211 739.2 468 80.3
Glyma.20G103100 Glycine max HOM05D004870 ORTHO05D006061 1.9e-211 739.2 427 84.8
ClCG01G008090 Citrullus lanatus HOM05D004870 ORTHO05D006061 2.5e-211 738.8 433 85.5
RcHm_v2.0_Chr5g0010781 Rosa chinensis HOM05D004870 ORTHO05D006061 3.3e-211 738.4 461 79.2
MD05G1301200 Malus domestica HOM05D004870 ORTHO05D006061 7.4e-211 737.3 461 79.8
Ah.08g211980 Amaranthus hybridus HOM05D004870 ORTHO05D006061 1.3e-210 736.5 436 83.3
COL.COLO4_33098 Corchorus olitorius HOM05D004870 ORTHO05D006061 1.6e-210 736.1 431 84.7
SGA_v2.0_scaffold428G51528 Striga asiatica HOM05D004870 ORTHO05D006061 1.6e-210 736.1 480 78.5
Psat6g233800 Pisum sativum HOM05D004870 ORTHO05D006061 3.7e-210 734.9 427 85.2
THA.LOC104800685 Tarenaya hassleriana HOM05D004870 ORTHO05D006061 3.7e-210 734.9 454 80.8
TWI74G1525 Tripterygium wilfordii HOM05D004870 ORTHO05D006061 3.7e-210 734.9 461 79.8
HanXRQChr01g0018951 Helianthus annuus HOM05D004870 ORTHO05D006061 4.8e-210 734.6 464 80.8
CsaV3_1G039280 Cucumis sativus L. HOM05D004870 ORTHO05D006061 6.3e-210 734.2 433 85.0
Ca_11257_v3 Cicer arietinum L. HOM05D004870 ORTHO05D006061 8.2e-210 733.8 443 82.4
MELO3C005067.2 Cucumis melo HOM05D004870 ORTHO05D006061 8.2e-210 733.8 428 85.0
CsaV3_5G020740 Cucumis sativus L. HOM05D004870 ORTHO05D006061 2.4e-209 732.3 433 84.5
TWI53G0925 Tripterygium wilfordii HOM05D004870 ORTHO05D006061 3.1e-209 731.9 461 80.7
PSO063G7087 Papaver somniferum HOM05D004870 ORTHO05D006061 1.2e-208 729.9 466 78.5
PSO782G4799 Papaver somniferum HOM05D004870 ORTHO05D006061 2.6e-208 728.8 467 78.2
PGR142G2596 Punica granatum HOM05D004870 ORTHO05D006061 2.6e-208 728.8 418 85.6
Aqoxy5G04369 Aquilegia oxysepala HOM05D004870 ORTHO05D006061 7.6e-208 727.2 415 86.3
MD10G1280100 Malus domestica HOM05D004870 ORTHO05D006061 1.3e-207 726.5 461 78.7
CARHR190240 Cardamine hirsuta HOM05D004870 ORTHO05D006061 2.9e-207 725.3 454 80.0
AT5G23300 Arabidopsis thaliana HOM05D004870 ORTHO05D006061 3.8e-207 724.9 454 79.7
Lj5g0006106 Lotus japonicus HOM05D004870 ORTHO05D006061 3.8e-207 724.9 427 83.8
Sabra05G0073800 Salix brachista HOM05D004870 ORTHO05D006061 6.5e-207 724.2 509 73.5
Aa31LG11G2760 Aethionema arabicum HOM05D004870 ORTHO05D006061 8.4e-207 723.8 465 78.9
CDE05G3274 Ceratophyllum demersum HOM05D004870 ORTHO05D006061 1.1e-206 723.4 461 78.1
Hund08594 Selenicereus undatus HOM05D004870 ORTHO05D006061 1.4e-206 723.0 487 77.0
EL10Ac7g17331 Beta vulgaris HOM05D004870 ORTHO05D006061 1.9e-206 722.6 457 80.3
Oeu063362.5 Olea europaea HOM05D004870 ORTHO05D006061 1.9e-206 722.6 485 77.1
FAN25G2081 Fragaria x ananassa HOM05D004870 ORTHO05D006061 7.2e-206 720.7 462 77.9
Sp2g23850 Schrenkiella parvula HOM05D004870 ORTHO05D006061 7.2e-206 720.7 438 81.5
BraA09t36349Z Brassica rapa HOM05D004870 ORTHO05D006061 9.3e-206 720.3 462 78.8
AL6G34560 Arabidopsis lyrata HOM05D004870 ORTHO05D006061 1.2e-205 719.9 438 81.7
Thhalv10004171m.g Eutrema salsugineum HOM05D004870 ORTHO05D006061 1.6e-205 719.5 429 83.0
FAN16G1105 Fragaria x ananassa HOM05D004870 ORTHO05D006061 2.1e-205 719.2 437 81.2
C07p44260 Brassica napus HOM05D004870 ORTHO05D006061 2.7e-205 718.8 439 81.3
BolC7t44949H Brassica oleracea HOM05D004870 ORTHO05D006061 2.7e-205 718.8 439 81.3
Carub.0006s2107 Capsella rubella HOM05D004870 ORTHO05D006061 2.7e-205 718.8 454 79.5
HPP92_014771 Vanilla planifolia HOM05D004870 ORTHO05D006061 3.5e-205 718.4 437 82.6
FvH4_3g07800 Fragaria vesca HOM05D004870 ORTHO05D006061 4.6e-205 718.0 462 77.7
A09p07010 Brassica napus HOM05D004870 ORTHO05D006061 6.1e-205 717.6 462 78.6
A06p34260 Brassica napus HOM05D004870 ORTHO05D006061 1.0e-204 716.8 439 81.1
BraA06t26358Z Brassica rapa HOM05D004870 ORTHO05D006061 1.0e-204 716.8 439 81.1
PSO339G5988 Papaver somniferum HOM05D004870 ORTHO05D006061 3.0e-204 715.3 466 77.0
Atru.chr11.1102 Acer truncatum HOM05D004870 ORTHO05D006061 5.1e-204 714.5 405 87.2
Atru.chr11.1106 Acer truncatum HOM05D004870 ORTHO05D006061 5.1e-204 714.5 405 87.2
Lj3A847T44 Lonicera japonica HOM05D004870 ORTHO05D006061 6.7e-204 714.1 391 89.5
FAN11G2678 Fragaria x ananassa HOM05D004870 ORTHO05D006061 8.7e-204 713.8 467 77.1
C09p07820 Brassica napus HOM05D004870 ORTHO05D006061 1.5e-203 713.0 433 81.3
BolC9t53698H Brassica oleracea HOM05D004870 ORTHO05D006061 1.5e-203 713.0 433 81.3
FAN21G1781 Fragaria x ananassa HOM05D004870 ORTHO05D006061 2.5e-203 712.2 467 76.9
Cfa008769 Carpinus fangiana HOM05D004870 ORTHO05D006061 3.3e-203 711.8 442 80.5
GSVIVG01026142001 Vitis vinifera HOM05D004870 ORTHO05D006061 3.3e-203 711.8 463 77.8
Rhsim09G0069200 Rhododendron simsii HOM05D004870 ORTHO05D006061 2.8e-202 708.8 438 81.7
Lsat_1_v5_gn_1_81640 Lactuca sativa HOM05D004870 ORTHO05D006061 4.8e-202 708.0 453 80.1
Os04g0676300 Oryza sativa ssp. japonica HOM05D004870 ORTHO05D006061 1.4e-201 706.4 420 82.6
ATR0618G304 Amborella trichopoda HOM05D004870 ORTHO05D006061 9.0e-201 703.7 427 81.3
Zm00001eb433680 Zea mays HOM05D004870 ORTHO05D006061 9.0e-201 703.7 470 75.5
ECA248G2791 Erigeron canadensis HOM05D004870 ORTHO05D006061 1.4e-196 689.9 455 78.7
AUR62030167 Chenopodium quinoa HOM05D004870 ORTHO05D006061 1.1e-193 680.2 381 87.1
AUR62002708 Chenopodium quinoa HOM05D004870 ORTHO05D006061 7.7e-192 674.1 381 86.1
Nitab4.5_0006274g0020 Nicotiana tabacum HOM05D004870 ORTHO05D006061 2.9e-191 672.2 464 74.8
QL06p048547 Quercus lobata HOM05D004870 ORTHO05D006061 6.3e-186 654.4 529 66.0
unitig_749.g13388 Utricularia gibba HOM05D004870 ORTHO05D006061 3.2e-182 642.1 414 78.5
Nn3g18601 Nelumbo nucifera HOM05D004870 ORTHO05D006061 5.5e-182 641.3 402 80.3
BcaB04g19879 Brassica carinata HOM05D004870 ORTHO05D006061 2.7e-181 639.0 433 74.4
BcaC04g23488 Brassica carinata HOM05D004870 ORTHO05D006061 6.1e-181 637.9 454 72.9
Peaxi162Scf00021g02316 Petunia axillaris HOM05D004870 ORTHO05D006061 8.0e-181 637.5 461 72.7
Prupe.6G003700 Prunus persica HOM05D004870 ORTHO05D006061 8.0e-181 637.5 460 71.7
SMO351G0256 Selaginella moellendorffii HOM05D004870 ORTHO05D006061 2.0e-179 632.9 413 76.3
Mapoly0020s0155 Marchantia polymorpha HOM05D004870 ORTHO05D006061 5.7e-179 631.3 441 73.0
Pp3c9_12870 Physcomitrium patens HOM05D004870 ORTHO05D006061 2.4e-177 625.9 441 72.3
Duzib248G0882 Durio zibethinus HOM05D004870 ORTHO05D006061 5.0e-175 618.2 462 70.1
Pp3c15_6200 Physcomitrium patens HOM05D004870 ORTHO05D006061 5.2e-172 608.2 465 66.9
Nitab4.5_0000069g0140 Nicotiana tabacum HOM05D004870 ORTHO05D006061 3.4e-171 605.5 493 67.3
SHI28437 Sapria himalayana HOM05D004870 ORTHO05D006061 8.3e-162 574.3 425 70.4
vmacro15993 Vaccinium macrocarpon HOM05D004870 ORTHO05D006061 4.1e-161 572.0 587 56.2
CBR_g49488 Chara braunii HOM05D004870 ORTHO05D006061 3.4e-147 525.8 429 61.1
MELO3C015352.2 Cucumis melo HOM05D004870 ORTHO05D006061 1.7e-143 513.5 307 84.4
CDE05G3051 Ceratophyllum demersum HOM05D004870 ORTHO05D006061 4.0e-140 502.3 330 77.0
CBR_g53542 Chara braunii HOM05D004870 ORTHO05D006061 2.3e-132 476.5 411 57.9
Cre03.g199423 Chlamydomonas reinhardtii HOM05D004870 ORTHO05D006061 1.1e-121 441.0 369 61.0
PSO339G2837 Papaver somniferum HOM05D004870 ORTHO05D006061 1.7e-114 417.2 405 56.0
AagrBONN_evm.TU.Sc2ySwM_340.305 Anthoceros agrestis HOM05D004870 ORTHO05D006061 7.1e-113 411.8 257 78.6
MCO08G060 Micromonas commoda HOM05D004870 ORTHO05D006061 1.8e-108 397.1 454 50.0
Potri.007G074201 Populus trichocarpa HOM05D004870 ORTHO05D006061 1.2e-107 394.4 251 78.5
AagrBONN_evm.TU.Sc2ySwM_228.5917 Anthoceros agrestis HOM05D004870 ORTHO05D006061 2.6e-107 393.3 458 50.4
Thecc.02G156000 Theobroma cacao HOM05D004870 ORTHO05D006061 1.2e-80 304.7 173 86.1
Potri.007G074101 Populus trichocarpa HOM05D004870 ORTHO05D006061 1.5e-78 297.7 188 81.4
Haze_27018 Corylus avellana HOM05D004870 ORTHO05D006061 3.3e-78 296.6 409 42.8
PSO782G3529 Papaver somniferum HOM05D004870 ORTHO05D006061 5.0e-74 282.7 282 56.0
Ca_29057_v3 Cicer arietinum L. HOM05D004870 ORTHO05D006061 1.4e-60 238.0 361 39.6
SEGI_23530 Sequoiadendron giganteum HOM05D004870 ORTHO05D006061 1.5e-57 228.0 157 73.9
Cfa021670 Carpinus fangiana HOM05D004870 ORTHO05D006061 2.0e-46 191.0 477 32.1
SEGI_39125 Sequoiadendron giganteum HOM05D004870 ORTHO05D006061 3.1e-44 183.7 117 79.5
vmacro15994 Vaccinium macrocarpon HOM05D004870 ORTHO05D006061 1.2e-30 138.7 72 91.7
C08p27210 Brassica napus HOM05D004870 ORTHO05D006061 1.5e-30 138.3 83 79.5
Thecc.02G156100 Theobroma cacao HOM05D004870 ORTHO05D006061 6.4e-29 132.9 69 89.9
RcHm_v2.0_Chr5g0064321 Rosa chinensis HOM05D004870 ORTHO05D006061 9.2e-28 129.0 81 84.0
C04p22220 Brassica napus HOM05D004870 ORTHO05D006061 1.3e-21 108.6 100 62.0
BcaC02g11010 Brassica carinata HOM05D004870 ORTHO05D006061 2.2e-21 107.8 76 72.4
RcHm_v2.0_Chr5g0050031 Rosa chinensis HOM05D004870 ORTHO05D006061 4.9e-21 106.7 66 86.4
arahy.Tifrunner.gnm1.ann1.7S4D4S Arachis hypogaea HOM05D004870 ORTHO05D000194 4.3e-17 93.6 61 75.4
PGR142G1834 Punica granatum HOM05D004870 ORTHO05D006061 1.1e-15 89.0 88 60.2
Pp3s46_240 Physcomitrium patens HOM05D003658 ORTHO05D004457 1.4e-15 88.6 296 26.4
RcHm_v2.0_Chr5g0050041 Rosa chinensis HOM05D004870 ORTHO05D347201 1.5e-09 68.6 50 66.0
C02p39510 Brassica napus HOM05D000461 ORTHO05D016800 4.7e-08 63.5 86 45.3
BolC2t09964H Brassica oleracea HOM05D000461 ORTHO05D016800 4.7e-08 63.5 86 45.3
CDE05G3312 Ceratophyllum demersum HOM05D004870 ORTHO05D130477 3.1e-07 60.8 77 44.2


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