Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr01g0018841 Helianthus annuus HOM05D003444 ORTHO05D003963 6.0e-72 274.2 155 100.0
HanXRQChr02g0035691 Helianthus annuus HOM05D003444 ORTHO05D003963 3.0e-31 139.0 84 92.9
Lsat_1_v5_gn_1_28101 Lactuca sativa HOM05D003444 ORTHO05D003963 6.7e-15 84.7 73 65.8
ECA247G0281 Erigeron canadensis HOM05D003444 ORTHO05D003963 4.1e-12 75.5 67 58.2
GSVIVG01007683001 Vitis vinifera HOM05D003444 ORTHO05D003963 1.4e-09 67.0 69 49.3
Actinidia19346 Actinidia chinensis HOM05D003444 ORTHO05D003963 1.9e-09 66.6 67 53.7
Dinv38555 Davidia involucrata HOM05D003444 ORTHO05D003963 5.5e-09 65.1 61 60.7
PGR083G1868 Punica granatum HOM05D003444 ORTHO05D003963 5.5e-09 65.1 69 49.3
CSS0017244 Camellia sinensis var. sinensis HOM05D003444 ORTHO05D003963 7.2e-09 64.7 63 50.8
Lj5A128T62 Lonicera japonica HOM05D003444 ORTHO05D003963 9.4e-09 64.3 53 56.6
Ciclev10020974m.g Citrus clementina HOM05D003444 ORTHO05D003963 1.2e-08 63.9 71 49.3
Actinidia33091 Actinidia chinensis HOM05D003444 ORTHO05D003963 1.6e-08 63.5 67 49.3
EL10Ac5g10690 Beta vulgaris HOM05D003444 ORTHO05D003963 2.1e-08 63.2 52 61.5
CSS0007999 Camellia sinensis var. sinensis HOM05D003444 ORTHO05D003963 4.6e-08 62.0 66 47.0
Haze_07554 Corylus avellana HOM05D003444 ORTHO05D003963 4.6e-08 62.0 58 51.7
TAR629G1253 Trochodendron aralioides HOM05D003444 ORTHO05D003963 4.6e-08 62.0 58 53.4
Cfa019176 Carpinus fangiana HOM05D003444 ORTHO05D003963 1.0e-07 60.8 58 50.0
FAN04G2640 Fragaria x ananassa HOM05D003444 ORTHO05D003963 1.0e-07 60.8 63 49.2
Potri.002G197600 Populus trichocarpa HOM05D003444 ORTHO05D003963 1.0e-07 60.8 69 49.3
VMungo1309G2319 Vigna mungo HOM05D003444 ORTHO05D003963 1.0e-07 60.8 64 48.4
AUR62008171 Chenopodium quinoa HOM05D003444 ORTHO05D003963 1.4e-07 60.5 69 50.7
FvH4_5g05840 Fragaria vesca HOM05D003444 ORTHO05D003963 1.4e-07 60.5 70 44.3
FAN18G3108 Fragaria x ananassa HOM05D003444 ORTHO05D003963 1.4e-07 60.5 70 44.3
Oeu046785.1 Olea europaea HOM05D003444 ORTHO05D003963 1.4e-07 60.5 51 54.9
Prupe.5G169400 Prunus persica HOM05D003444 ORTHO05D003963 1.4e-07 60.5 64 45.3
QL10p008500 Quercus lobata HOM05D003444 ORTHO05D003963 1.4e-07 60.5 51 56.9
QL10p008629 Quercus lobata HOM05D003444 ORTHO05D003963 1.4e-07 60.5 51 56.9
MSTRG.23156 Avicennia marina HOM05D003444 ORTHO05D003963 1.8e-07 60.1 69 47.8
Nn4g22663 Nelumbo nucifera HOM05D003444 ORTHO05D003963 1.8e-07 60.1 52 57.7
arahy.Tifrunner.gnm1.ann1.GAE861 Arachis hypogaea HOM05D003444 ORTHO05D003963 3.0e-07 59.3 59 47.5
AUR62028748 Chenopodium quinoa HOM05D003444 ORTHO05D003963 3.0e-07 59.3 69 49.3
HanXRQChr16g0504631 Helianthus annuus HOM05D003444 ORTHO05D003963 3.0e-07 59.3 68 50.0
Ca_16152_v3 Cicer arietinum L. HOM05D003444 ORTHO05D003963 3.9e-07 58.9 65 44.6
Phvul.002G107400 Phaseolus vulgaris HOM05D003444 ORTHO05D003963 3.9e-07 58.9 64 46.9
Hund09457 Selenicereus undatus HOM05D003444 ORTHO05D003963 3.9e-07 58.9 59 54.2
CSS0033661 Camellia sinensis var. sinensis HOM05D003444 ORTHO05D003963 5.1e-07 58.5 68 47.1
MD06G1169900 Malus domestica HOM05D003444 ORTHO05D003963 5.1e-07 58.5 70 45.7
Rhsim08G0175500 Rhododendron simsii HOM05D003444 ORTHO05D003963 5.1e-07 58.5 61 54.1
FAN08G2080 Fragaria x ananassa HOM05D003444 ORTHO05D003963 6.7e-07 58.2 70 42.9
RcHm_v2.0_Chr7g0192981 Rosa chinensis HOM05D003444 ORTHO05D003963 6.7e-07 58.2 60 51.7
TPR.G31058 Trifolium pratense HOM05D003444 ORTHO05D003963 6.7e-07 58.2 48 54.2
Cc04_g12590 Coffea canephora HOM05D003444 ORTHO05D003963 8.8e-07 57.8 57 47.4
Cpa.g.sc35.80 Carica papaya HOM05D003444 ORTHO05D003963 1.1e-06 57.4 66 45.5
CiPaw.12G029000 Carya illinoinensis HOM05D003444 ORTHO05D003963 1.1e-06 57.4 58 46.6
Manes.14G062700 Manihot esculenta HOM05D003444 ORTHO05D003963 1.1e-06 57.4 52 55.8
TPR.G37557 Trifolium pratense HOM05D003444 ORTHO05D003963 1.5e-06 57.0 60 45.0
Eucgr.B03880 Eucalyptus grandis HOM05D003444 ORTHO05D003963 2.0e-06 56.6 59 47.5
TAR374G1632 Trochodendron aralioides HOM05D003444 ORTHO05D003963 2.5e-06 56.2 56 46.4
Migut.G00959 Erythranthe guttata HOM05D003444 ORTHO05D003963 3.3e-06 55.8 87 40.2
Glyma.17G086600 Glycine max HOM05D003444 ORTHO05D003963 4.3e-06 55.5 71 45.1
arahy.Tifrunner.gnm1.ann1.NDZJ5A Arachis hypogaea HOM05D003444 ORTHO05D003963 5.7e-06 55.1 59 45.8
CANSAT80G2021 Cannabis sativa HOM05D003444 ORTHO05D003963 5.7e-06 55.1 67 43.3
Peaxi162Scf00089g01529 Petunia axillaris HOM05D003444 ORTHO05D003963 5.7e-06 55.1 61 47.5
PSO478G2857 Papaver somniferum HOM05D003444 ORTHO05D003963 7.4e-06 54.7 70 44.3
Sed0021330 Sechium edule HOM05D003444 ORTHO05D003963 7.4e-06 54.7 70 45.7
Sc12g0005160 Simmondsia chinensis HOM05D003444 ORTHO05D003963 7.4e-06 54.7 57 49.1
CiPaw.11G022500 Carya illinoinensis HOM05D003444 ORTHO05D003963 9.7e-06 54.3 59 47.5
Ca_21949_v3 Cicer arietinum L. HOM05D003444 ORTHO05D003963 9.7e-06 54.3 49 51.0
COL.COLO4_30111 Corchorus olitorius HOM05D003444 ORTHO05D003963 9.7e-06 54.3 57 54.4
Sc12g0005130 Simmondsia chinensis HOM05D003444 ORTHO05D003963 9.7e-06 54.3 35 65.7


User provided reference genes

Program Settings