Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr01g0002901 Helianthus annuus HOM05D003625 ORTHO05D004382 1.0e-48 196.4 100 100.0
HanXRQChr12g0370771 Helianthus annuus HOM05D003625 ORTHO05D004382 1.5e-23 112.8 98 61.2
HanXRQChr12g0370811 Helianthus annuus HOM05D003625 ORTHO05D004382 3.3e-23 111.7 98 60.2
Aqoxy2G00575 Aquilegia oxysepala HOM05D003625 ORTHO05D004382 2.6e-12 75.5 101 43.6
Dinv32982 Davidia involucrata HOM05D003625 ORTHO05D004382 3.4e-12 75.1 101 43.6
Lsat_1_v5_gn_5_189721 Lactuca sativa HOM05D003625 ORTHO05D004382 5.8e-12 74.3 97 45.4
vmacro02517 Vaccinium macrocarpon HOM05D003625 ORTHO05D004382 5.8e-12 74.3 101 45.5
GSVIVG01011024001 Vitis vinifera HOM05D003625 ORTHO05D004382 5.8e-12 74.3 97 43.3
Manes.03G013700 Manihot esculenta HOM05D003625 ORTHO05D004382 7.6e-12 73.9 101 45.5
Ciclev10018730m.g Citrus clementina HOM05D003625 ORTHO05D004382 1.0e-11 73.6 98 41.8
Haze_24021 Corylus avellana HOM05D003625 ORTHO05D004382 1.0e-11 73.6 102 42.2
RcHm_v2.0_Chr6g0292351 Rosa chinensis HOM05D003625 ORTHO05D004382 1.0e-11 73.6 101 43.6
Hma1.2p1_0209F.1_g089230 Hydrangea macrophylla HOM05D003625 ORTHO05D004382 1.3e-11 73.2 97 44.3
Cfa006055 Carpinus fangiana HOM05D003625 ORTHO05D006197 2.2e-11 72.4 102 43.1
Lsat_1_v5_gn_8_55721 Lactuca sativa HOM05D003625 ORTHO05D004382 2.2e-11 72.4 98 45.9
CAN.G426.9 Capsicum annuum HOM05D003625 ORTHO05D004382 2.9e-11 72.0 98 44.9
Hma1.2p1_0358F.1_g134790 Hydrangea macrophylla HOM05D003625 ORTHO05D004382 3.8e-11 71.6 99 41.4
Cfa011439 Carpinus fangiana HOM05D003625 ORTHO05D004382 4.9e-11 71.2 101 42.6
COL.COLO4_09853 Corchorus olitorius HOM05D003625 ORTHO05D004382 4.9e-11 71.2 99 43.4
Lj3g0001853 Lotus japonicus HOM05D003625 ORTHO05D004382 4.9e-11 71.2 101 41.6
Psat5g282480 Pisum sativum HOM05D003625 ORTHO05D004382 4.9e-11 71.2 100 41.0
Prupe.8G250800 Prunus persica HOM05D003625 ORTHO05D004382 4.9e-11 71.2 101 42.6
Glyma.13G332300 Glycine max HOM05D003625 ORTHO05D004382 6.5e-11 70.9 101 42.6
CANSAT25G1777 Cannabis sativa HOM05D003625 ORTHO05D004382 8.4e-11 70.5 101 42.6
Glyma.15G042000 Glycine max HOM05D003625 ORTHO05D004382 8.4e-11 70.5 101 41.6
Nn3g21233 Nelumbo nucifera HOM05D003625 ORTHO05D004382 8.4e-11 70.5 103 41.7
Phvul.L001843 Phaseolus vulgaris HOM05D003625 ORTHO05D004382 8.4e-11 70.5 101 42.6
QL12p023448 Quercus lobata HOM05D003625 ORTHO05D004382 8.4e-11 70.5 101 45.5
VMungo1080G0322 Vigna mungo HOM05D003625 ORTHO05D004382 8.4e-11 70.5 101 41.6
HanXRQChr05g0150041 Helianthus annuus HOM05D003625 ORTHO05D004382 1.1e-10 70.1 98 41.8
HanXRQChr06g0164001 Helianthus annuus HOM05D003625 ORTHO05D004382 1.1e-10 70.1 97 42.3
Psat5g051000 Pisum sativum HOM05D003625 ORTHO05D004382 1.1e-10 70.1 100 40.0
Rhsim13G0018500 Rhododendron simsii HOM05D003625 ORTHO05D004382 1.1e-10 70.1 101 44.6
Solyc09g074330.3 Solanum lycopersicum HOM05D003625 ORTHO05D004382 1.1e-10 70.1 98 44.9
Sopen09g029170 Solanum pennellii HOM05D003625 ORTHO05D004382 1.1e-10 70.1 98 44.9
Ca_01352_v3 Cicer arietinum L. HOM05D003625 ORTHO05D004382 1.4e-10 69.7 101 39.6
MD02G1277900 Malus domestica HOM05D003625 ORTHO05D004382 1.4e-10 69.7 107 40.2
QL93p2003_0013 Quercus lobata HOM05D003625 ORTHO05D004382 1.4e-10 69.7 101 45.5
Atru.chr5.1297 Acer truncatum HOM05D003625 ORTHO05D004382 1.9e-10 69.3 101 42.6
Lalb_Chr22g0350011 Lupinus albus HOM05D003625 ORTHO05D004382 1.9e-10 69.3 100 40.0
AUR62034443 Chenopodium quinoa HOM05D003625 ORTHO05D004382 4.2e-10 68.2 101 41.6
Cc01_g20080 Coffea canephora HOM05D003625 ORTHO05D004382 4.2e-10 68.2 100 40.0
Peaxi162Scf00006g03621 Petunia axillaris HOM05D003625 ORTHO05D004382 4.2e-10 68.2 98 42.9
Potri.014G135700 Populus trichocarpa HOM05D003625 ORTHO05D004382 5.5e-10 67.8 100 42.0
Dinv11285 Davidia involucrata HOM05D003625 ORTHO05D004382 7.1e-10 67.4 97 42.3
AUR62028969 Chenopodium quinoa HOM05D003625 ORTHO05D004382 9.3e-10 67.0 101 41.6
ECA236G1413 Erigeron canadensis HOM05D003625 ORTHO05D004382 9.3e-10 67.0 98 42.9
Nitab4.5_0001651g0100 Nicotiana tabacum HOM05D003625 ORTHO05D004382 9.3e-10 67.0 98 42.9
Nitab4.5_0010231g0010 Nicotiana tabacum HOM05D003625 ORTHO05D004382 9.3e-10 67.0 98 42.9
arahy.Tifrunner.gnm1.ann1.TJRY6P Arachis hypogaea HOM05D003625 ORTHO05D004382 1.2e-09 66.6 100 40.0
TPR.G34306 Trifolium pratense HOM05D003625 ORTHO05D004382 1.2e-09 66.6 101 39.6
Ca_19197_v3 Cicer arietinum L. HOM05D003625 ORTHO05D004382 1.6e-09 66.2 101 42.6
FAN15G0592 Fragaria x ananassa HOM05D003625 ORTHO05D004382 1.6e-09 66.2 99 41.4
Medtr2g096290 Medicago truncatula HOM05D003625 ORTHO05D004382 1.6e-09 66.2 101 39.6
Psat7g219280 Pisum sativum HOM05D003625 ORTHO05D004382 1.6e-09 66.2 101 42.6
CSS0039297 Camellia sinensis var. sinensis HOM05D003625 ORTHO05D004382 2.1e-09 65.9 98 41.8
AUR62034492 Chenopodium quinoa HOM05D003625 ORTHO05D004382 2.7e-09 65.5 101 41.6
AUR62034599 Chenopodium quinoa HOM05D003625 ORTHO05D004382 2.7e-09 65.5 101 40.6
FAN20G2140 Fragaria x ananassa HOM05D003625 ORTHO05D004382 2.7e-09 65.5 97 42.3
Lalb_Chr01g0003851 Lupinus albus HOM05D003625 ORTHO05D004382 2.7e-09 65.5 99 39.4
TPR.G1039 Trifolium pratense HOM05D003625 ORTHO05D004382 2.7e-09 65.5 101 41.6
TWI59G0316 Tripterygium wilfordii HOM05D003625 ORTHO05D004382 2.7e-09 65.5 100 45.0
FvH4_2g24490 Fragaria vesca HOM05D003625 ORTHO05D004382 3.5e-09 65.1 97 41.2
FvH4_2g24530 Fragaria vesca HOM05D003625 ORTHO05D004382 3.5e-09 65.1 97 41.2
FAN24G2516 Fragaria x ananassa HOM05D003625 ORTHO05D004382 4.6e-09 64.7 97 40.2
Duzib170G0264 Durio zibethinus HOM05D003625 ORTHO05D004382 6.0e-09 64.3 102 39.2
Potri.002G213400 Populus trichocarpa HOM05D003625 ORTHO05D004382 6.0e-09 64.3 100 41.0
Thecc.07G010400 Theobroma cacao HOM05D003625 ORTHO05D004382 6.0e-09 64.3 99 40.4
Gohir.A04G004900 Gossypium hirsutum HOM05D003625 ORTHO05D004382 7.9e-09 63.9 100 41.0
TAR365G1186 Trochodendron aralioides HOM05D003625 ORTHO05D004382 7.9e-09 63.9 103 41.7
ATR0626G050 Amborella trichopoda HOM05D003625 ORTHO05D004382 1.0e-08 63.5 103 37.9
Duzib268G0343 Durio zibethinus HOM05D003625 ORTHO05D004382 1.0e-08 63.5 101 39.6
Gorai.009G451700 Gossypium raimondii HOM05D003625 ORTHO05D004382 1.0e-08 63.5 100 40.0
EL10Ac7g17149 Beta vulgaris HOM05D003625 ORTHO05D004382 1.3e-08 63.2 101 41.6
Duzib213G0855 Durio zibethinus HOM05D003625 ORTHO05D004382 1.3e-08 63.2 101 39.6
FAN27G0529 Fragaria x ananassa HOM05D003625 ORTHO05D004382 1.3e-08 63.2 97 41.2
Lj3g0005082 Lotus japonicus HOM05D003625 ORTHO05D004382 1.8e-08 62.8 98 39.8
MBI19_g35956_MAGBIO Magnolia biondii HOM05D003625 ORTHO05D004382 1.8e-08 62.8 105 38.1
Medtr4g063030 Medicago truncatula HOM05D003625 ORTHO05D004382 1.8e-08 62.8 101 40.6
QL01p033546 Quercus lobata HOM05D003625 ORTHO05D004382 2.3e-08 62.4 89 41.6
Sabra02G0149300 Salix brachista HOM05D003625 ORTHO05D004382 2.3e-08 62.4 100 40.0
arahy.Tifrunner.gnm1.ann1.L6Y1E3 Arachis hypogaea HOM05D003625 ORTHO05D004382 3.0e-08 62.0 100 38.0
MELO3C020662.2 Cucumis melo HOM05D003625 ORTHO05D004382 3.0e-08 62.0 99 38.4
CsaV3_1G033940 Cucumis sativus L. HOM05D003625 ORTHO05D004382 3.0e-08 62.0 99 38.4
Eucgr.C03805 Eucalyptus grandis HOM05D003625 ORTHO05D004382 3.0e-08 62.0 101 37.6
Gohir.D05G385000 Gossypium hirsutum HOM05D003625 ORTHO05D004382 3.9e-08 61.6 100 39.0
Sc17g0003660 Simmondsia chinensis HOM05D003625 ORTHO05D004382 3.9e-08 61.6 102 41.2
arahy.Tifrunner.gnm1.ann1.6HBC95 Arachis hypogaea HOM05D003625 ORTHO05D004382 6.7e-08 60.8 101 39.6
arahy.Tifrunner.gnm1.ann1.E19P6N Arachis hypogaea HOM05D003625 ORTHO05D004382 6.7e-08 60.8 101 39.6
ClCG03G001700 Citrullus lanatus HOM05D003625 ORTHO05D004382 6.7e-08 60.8 99 37.4
PGR044G2464 Punica granatum HOM05D003625 ORTHO05D004382 8.7e-08 60.5 98 39.8
Sed0013189 Sechium edule HOM05D003625 ORTHO05D004382 1.1e-07 60.1 100 37.0
HPP92_011331 Vanilla planifolia HOM05D003625 ORTHO05D004382 1.1e-07 60.1 102 38.2
CiPaw.08G101000 Carya illinoinensis HOM05D003625 ORTHO05D004382 1.9e-07 59.3 99 41.4
Cpa.g.sc60.39 Carica papaya HOM05D003625 ORTHO05D004382 3.3e-07 58.5 98 40.8
Oeu022807.1 Olea europaea HOM05D003625 ORTHO05D004382 3.3e-07 58.5 100 40.0
THA.LOC104801203 Tarenaya hassleriana HOM05D003625 ORTHO05D004382 3.3e-07 58.5 101 36.6
CSS0005803 Camellia sinensis var. sinensis HOM05D003625 ORTHO05D004382 7.4e-07 57.4 90 40.0
MSTRG.18201 Avicennia marina HOM05D003625 ORTHO05D004382 1.6e-06 56.2 96 34.4
Sabra14G0102100 Salix brachista HOM05D003625 ORTHO05D004382 2.8e-06 55.5 133 32.3
CDE05G3415 Ceratophyllum demersum HOM05D003625 ORTHO05D004382 3.7e-06 55.1 103 36.9
PSO170G6480 Papaver somniferum HOM05D003625 ORTHO05D004382 6.2e-06 54.3 100 35.0
Pp3c15_10800 Physcomitrium patens HOM05D003625 ORTHO05D004382 8.2e-06 53.9 100 32.0
SalBow3G1663 Salvia bowleyana HOM05D003625 ORTHO05D004382 8.2e-06 53.9 100 39.0


User provided reference genes

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