Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr00c0759g0577191 Helianthus annuus HOM05D000806 ORTHO05D002320 2.6e-33 144.8 74 100.0
HanXRQChr02g0041561 Helianthus annuus HOM05D000806 ORTHO05D002320 5.4e-31 137.1 74 95.9
HanXRQChr08g0210341 Helianthus annuus HOM05D000806 ORTHO05D002320 5.4e-31 137.1 74 95.9
ECA074G0009 Erigeron canadensis HOM05D000806 ORTHO05D002324 6.0e-22 107.1 58 94.8
ECA077G0001 Erigeron canadensis HOM05D000806 ORTHO05D002324 6.0e-22 107.1 58 94.8
ECA236G1817 Erigeron canadensis HOM05D000806 ORTHO05D000001 6.0e-22 107.1 58 94.8
HanXRQChr01g0020371 Helianthus annuus HOM05D000806 ORTHO05D002320 6.0e-22 107.1 58 94.8
HanXRQChr02g0044911 Helianthus annuus HOM05D000806 ORTHO05D002320 6.0e-22 107.1 58 94.8
HanXRQChr10g0283541 Helianthus annuus HOM05D000806 ORTHO05D002320 6.0e-22 107.1 58 94.8
HanXRQChr10g0284231 Helianthus annuus HOM05D000806 ORTHO05D002320 6.0e-22 107.1 58 94.8
HanXRQChr10g0289251 Helianthus annuus HOM05D000806 ORTHO05D002320 6.0e-22 107.1 58 94.8
HanXRQChr11g0326811 Helianthus annuus HOM05D000806 ORTHO05D002320 6.0e-22 107.1 58 94.8
HanXRQCPg0580021 Helianthus annuus HOM05D000806 ORTHO05D002320 6.0e-22 107.1 58 94.8
Lsat_1_v5_gn_8_144641 Lactuca sativa HOM05D000806 ORTHO05D002320 1.3e-21 105.9 58 93.1
Dinv26731 Davidia involucrata HOM05D001133 ORTHO05D000941 6.6e-21 103.6 58 91.4
Cfa021575 Carpinus fangiana HOM05D000806 ORTHO05D002324 8.7e-21 103.2 66 81.8
Potri.013G162600 Populus trichocarpa HOM05D000806 ORTHO05D002320 8.7e-21 103.2 58 89.7
Gohir.1Z049999 Gossypium hirsutum HOM05D000806 ORTHO05D002320 1.5e-20 102.4 58 89.7
Gohir.A07G163654 Gossypium hirsutum HOM05D000806 ORTHO05D002320 1.5e-20 102.4 58 89.7
Gorai.012G151800 Gossypium raimondii HOM05D000806 ORTHO05D002320 1.5e-20 102.4 58 89.7
Sed0010807 Sechium edule HOM05D000806 ORTHO05D002320 1.5e-20 102.4 58 89.7
Sed0026664 Sechium edule HOM05D000806 ORTHO05D002320 1.5e-20 102.4 58 89.7
PGR111G0026 Punica granatum HOM05D000806 ORTHO05D002320 1.9e-20 102.1 58 87.9
Sabra10G0056300 Salix brachista HOM05D000806 ORTHO05D002320 1.9e-20 102.1 58 87.9
SabraPtG0003400 Salix brachista HOM05D000806 ORTHO05D002324 1.9e-20 102.1 58 87.9
DCAR_032493 Daucus carota HOM05D000806 ORTHO05D002320 2.5e-20 101.7 58 89.7
Hma1.2p1_0242F.1_g100623 Hydrangea macrophylla HOM05D000806 ORTHO05D002320 2.5e-20 101.7 58 89.7
Hma1.2p1_0242F.1_g100626 Hydrangea macrophylla HOM05D000806 ORTHO05D002320 2.5e-20 101.7 58 89.7
Hma1.2p1_0242F.1_g100629 Hydrangea macrophylla HOM05D000806 ORTHO05D002320 2.5e-20 101.7 58 89.7
Hma1.2p1_0355F.1_g133923 Hydrangea macrophylla HOM05D000806 ORTHO05D002320 2.5e-20 101.7 58 89.7
QL93p0311_0018 Quercus lobata HOM05D000806 ORTHO05D002320 3.3e-20 101.3 66 81.8
Lsat_1_v5_gn_9_98941 Lactuca sativa HOM05D000806 ORTHO05D002320 5.6e-20 100.5 58 89.7
LjContig00318g0000728 Lotus japonicus HOM05D000806 ORTHO05D002320 5.6e-20 100.5 66 78.8
MD02G1049400 Malus domestica HOM05D000806 ORTHO05D002320 5.6e-20 100.5 54 92.6
SGA_v2.0_scaffold781G53597 Striga asiatica HOM05D000806 ORTHO05D002320 5.6e-20 100.5 59 84.7
Gohir.D01G102333 Gossypium hirsutum HOM05D000806 ORTHO05D002320 7.3e-20 100.1 58 87.9
Sc03g0005200 Simmondsia chinensis HOM05D000806 ORTHO05D002320 7.3e-20 100.1 58 86.2
unitig_91.g26508 Utricularia gibba HOM05D000806 ORTHO05D002320 7.3e-20 100.1 58 86.2
Gohir.1Z050266 Gossypium hirsutum HOM05D000806 ORTHO05D002320 9.6e-20 99.8 58 86.2
RcHm_v2.0_Chr5g0042991 Rosa chinensis HOM05D000806 ORTHO05D002320 2.1e-19 98.6 58 86.2
RcHm_v2.0_CPg0502101 Rosa chinensis HOM05D000806 ORTHO05D002320 2.1e-19 98.6 58 86.2
Lj2C1239T39 Lonicera japonica HOM05D000806 ORTHO05D002320 2.8e-19 98.2 66 78.8
Psat0s2288g0160 Pisum sativum HOM05D000806 ORTHO05D002320 2.8e-19 98.2 63 85.7
Lalb_Chr11g0071601 Lupinus albus HOM05D000806 ORTHO05D002320 3.6e-19 97.8 54 88.9
Lalb_Chr23g0274531 Lupinus albus HOM05D000806 ORTHO05D002320 3.6e-19 97.8 54 88.9
CAN.G1478.9 Capsicum annuum HOM05D000806 ORTHO05D002320 4.8e-19 97.4 66 78.8
Peaxi162Scf01064g00230 Petunia axillaris HOM05D000806 ORTHO05D002320 4.8e-19 97.4 66 78.8
Ah.10g027510 Amaranthus hybridus HOM05D000806 ORTHO05D002324 6.2e-19 97.1 58 86.2
Ah.10g027920 Amaranthus hybridus HOM05D000806 ORTHO05D002324 6.2e-19 97.1 58 86.2
Ah.10g028630 Amaranthus hybridus HOM05D000806 ORTHO05D002324 6.2e-19 97.1 58 86.2
AUR62006476 Chenopodium quinoa HOM05D000806 ORTHO05D002320 6.2e-19 97.1 58 84.5
AUR62032522 Chenopodium quinoa HOM05D000806 ORTHO05D002320 6.2e-19 97.1 58 84.5
AUR62042261 Chenopodium quinoa HOM05D000806 ORTHO05D002324 6.2e-19 97.1 58 84.5
EL10As15g24119 Beta vulgaris HOM05D000806 ORTHO05D002320 8.1e-19 96.7 58 84.5
EL10As1g23054 Beta vulgaris HOM05D000806 ORTHO05D002324 8.1e-19 96.7 58 84.5
CDE02G2600 Ceratophyllum demersum HOM05D000806 ORTHO05D002320 8.1e-19 96.7 66 78.8
BolSC35t60644H Brassica oleracea HOM05D000806 ORTHO05D002320 1.1e-18 96.3 58 82.8
BolSC35t60752H Brassica oleracea HOM05D000806 ORTHO05D002320 1.1e-18 96.3 58 82.8
BolSC47t61099H Brassica oleracea HOM05D000806 ORTHO05D002320 1.1e-18 96.3 58 82.8
TPR.G16839 Trifolium pratense HOM05D000806 ORTHO05D002320 1.1e-18 96.3 54 90.7
vmacro13610 Vaccinium macrocarpon HOM05D000806 ORTHO05D002320 1.1e-18 96.3 66 77.3
VMungo0251G1963 Vigna mungo HOM05D000806 ORTHO05D010715 1.1e-18 96.3 58 82.8
Nn010s41432 Nelumbo nucifera HOM05D000806 ORTHO05D002320 1.4e-18 95.9 58 86.2
Nn010s41447 Nelumbo nucifera HOM05D000806 ORTHO05D002320 1.4e-18 95.9 58 86.2
Hund03831 Selenicereus undatus HOM05D000806 ORTHO05D002320 1.4e-18 95.9 66 77.3
Hund07992 Selenicereus undatus HOM05D000806 ORTHO05D002320 1.4e-18 95.9 66 77.3
Hund08575 Selenicereus undatus HOM05D000806 ORTHO05D002320 1.4e-18 95.9 66 77.3
Hund08809 Selenicereus undatus HOM05D000806 ORTHO05D002320 1.4e-18 95.9 66 77.3
Hund19838 Selenicereus undatus HOM05D000806 ORTHO05D002320 1.4e-18 95.9 66 77.3
Hund22639 Selenicereus undatus HOM05D000806 ORTHO05D002320 1.4e-18 95.9 73 69.9
Hund22772 Selenicereus undatus HOM05D000806 ORTHO05D002320 1.4e-18 95.9 66 77.3
Hund27485 Selenicereus undatus HOM05D000806 ORTHO05D002320 1.4e-18 95.9 66 77.3
Hund27570 Selenicereus undatus HOM05D000680 ORTHO05D002320 1.4e-18 95.9 66 77.3
Hund27599 Selenicereus undatus HOM05D000806 ORTHO05D002320 1.4e-18 95.9 66 77.3
Hund27874 Selenicereus undatus HOM05D000806 ORTHO05D002320 1.4e-18 95.9 66 77.3
Hund27955 Selenicereus undatus HOM05D000806 ORTHO05D002320 1.4e-18 95.9 66 77.3
Hund27977 Selenicereus undatus HOM05D000806 ORTHO05D002320 1.4e-18 95.9 66 77.3
Hund28101 Selenicereus undatus HOM05D000806 ORTHO05D002320 1.4e-18 95.9 66 77.3
Hund28450 Selenicereus undatus HOM05D000680 ORTHO05D002320 1.4e-18 95.9 66 77.3
Hund28473 Selenicereus undatus HOM05D000806 ORTHO05D002320 1.4e-18 95.9 66 77.3
Hund28492 Selenicereus undatus HOM05D000806 ORTHO05D002320 1.4e-18 95.9 66 77.3
Hund28511 Selenicereus undatus HOM05D000806 ORTHO05D002320 1.4e-18 95.9 66 77.3
Hund28624 Selenicereus undatus HOM05D000806 ORTHO05D002320 1.4e-18 95.9 66 77.3
Hund28738 Selenicereus undatus HOM05D000680 ORTHO05D002320 1.4e-18 95.9 66 77.3
Hund28748 Selenicereus undatus HOM05D000806 ORTHO05D002320 1.4e-18 95.9 66 77.3
Hund28838 Selenicereus undatus HOM05D000806 ORTHO05D002320 1.4e-18 95.9 66 77.3
Hund29142 Selenicereus undatus HOM05D000806 ORTHO05D002320 1.4e-18 95.9 66 77.3
Hund29174 Selenicereus undatus HOM05D000680 ORTHO05D002320 1.4e-18 95.9 66 77.3
Hund29363 Selenicereus undatus HOM05D000806 ORTHO05D002320 1.4e-18 95.9 66 77.3
Hund29462 Selenicereus undatus HOM05D000806 ORTHO05D002320 1.4e-18 95.9 66 77.3
Hund29492 Selenicereus undatus HOM05D000806 ORTHO05D002320 1.4e-18 95.9 66 77.3
Hund29619 Selenicereus undatus HOM05D000806 ORTHO05D002320 1.4e-18 95.9 66 77.3
Hund29637 Selenicereus undatus HOM05D000806 ORTHO05D002320 1.4e-18 95.9 66 77.3
Hund29805 Selenicereus undatus HOM05D000806 ORTHO05D002320 1.4e-18 95.9 66 77.3
Hund29828 Selenicereus undatus HOM05D000806 ORTHO05D002320 1.4e-18 95.9 66 77.3
Hund29868 Selenicereus undatus HOM05D000806 ORTHO05D002320 1.4e-18 95.9 66 77.3
Hund30328 Selenicereus undatus HOM05D000806 ORTHO05D002320 1.4e-18 95.9 66 77.3
Hund30362 Selenicereus undatus HOM05D000806 ORTHO05D002320 1.4e-18 95.9 66 77.3
Hund30468 Selenicereus undatus HOM05D000806 ORTHO05D002320 1.4e-18 95.9 66 77.3
Hund30508 Selenicereus undatus HOM05D000806 ORTHO05D002320 1.4e-18 95.9 66 77.3
Hund30560 Selenicereus undatus HOM05D000806 ORTHO05D002320 1.4e-18 95.9 66 77.3
Hund30896 Selenicereus undatus HOM05D000806 ORTHO05D002320 1.4e-18 95.9 66 77.3
Medtr4g034770 Medicago truncatula HOM05D000806 ORTHO05D002320 1.8e-18 95.5 54 88.9
Psat5g134840 Pisum sativum HOM05D000806 ORTHO05D002320 1.8e-18 95.5 67 73.1
PSO548G0072 Papaver somniferum HOM05D000806 ORTHO05D002320 2.4e-18 95.1 58 84.5
Psat0s2754g0160 Pisum sativum HOM05D000806 ORTHO05D002320 2.4e-18 95.1 66 78.8
Psat0s6989g0080 Pisum sativum HOM05D000806 ORTHO05D002320 2.4e-18 95.1 66 78.8
Psat2g111000 Pisum sativum HOM05D000806 ORTHO05D002320 2.4e-18 95.1 66 78.8
arahy.Tifrunner.gnm1.ann1.15M9SP Arachis hypogaea HOM05D000806 ORTHO05D002320 3.1e-18 94.7 58 81.0
arahy.Tifrunner.gnm1.ann1.Y8HZNS Arachis hypogaea HOM05D000806 ORTHO05D002320 3.1e-18 94.7 58 81.0
Phvul.002G278116 Phaseolus vulgaris HOM05D000806 ORTHO05D002320 3.1e-18 94.7 58 81.0
Psat0s1152g0040 Pisum sativum HOM05D000806 ORTHO05D002320 3.1e-18 94.7 66 78.8
vmacro13611 Vaccinium macrocarpon HOM05D000806 ORTHO05D002320 3.1e-18 94.7 66 75.8
AL2G20668 Arabidopsis lyrata HOM05D000806 ORTHO05D002320 4.0e-18 94.4 58 82.8
AL2G21530 Arabidopsis lyrata HOM05D000806 ORTHO05D002320 4.0e-18 94.4 58 82.8
ATCG00500 Arabidopsis thaliana HOM05D000806 ORTHO05D002320 4.0e-18 94.4 58 82.8
C02p43520 Brassica napus HOM05D000806 ORTHO05D002320 4.0e-18 94.4 58 82.8
C09p29580 Brassica napus HOM05D000806 ORTHO05D002320 4.0e-18 94.4 58 82.8
C09p40220 Brassica napus HOM05D000806 ORTHO05D002320 4.0e-18 94.4 58 82.8
BraA06t25423Z Brassica rapa HOM05D000806 ORTHO05D002320 4.0e-18 94.4 58 82.8
BraSC59t46593Z Brassica rapa HOM05D000806 ORTHO05D002320 4.0e-18 94.4 58 82.8
BraSC140t45575Z Brassica rapa HOM05D000806 ORTHO05D007429 5.3e-18 94.0 70 71.4
AUR62041919 Chenopodium quinoa HOM05D000806 ORTHO05D002324 5.3e-18 94.0 58 81.0
Thhalv10011034m.g Eutrema salsugineum HOM05D000806 ORTHO05D002320 5.3e-18 94.0 58 82.8
Psat6g140480 Pisum sativum HOM05D000806 ORTHO05D002320 5.3e-18 94.0 66 77.3
Ah.03g144240 Amaranthus hybridus HOM05D000806 ORTHO05D002324 6.9e-18 93.6 58 82.8
Gohir.D13G043800 Gossypium hirsutum HOM05D000806 ORTHO05D002320 6.9e-18 93.6 58 82.8
Hund27490 Selenicereus undatus HOM05D000806 ORTHO05D002320 6.9e-18 93.6 66 75.8
Eucgr.I02537 Eucalyptus grandis HOM05D000806 ORTHO05D002320 9.0e-18 93.2 58 81.0
HPP92_028392 Vanilla planifolia HOM05D000806 ORTHO05D002320 9.0e-18 93.2 66 75.8
HPP92_028399 Vanilla planifolia HOM05D000806 ORTHO05D002320 9.0e-18 93.2 66 75.8
HPP92_028409 Vanilla planifolia HOM05D000806 ORTHO05D002320 9.0e-18 93.2 66 75.8
Oeu028778.1 Olea europaea HOM05D000806 ORTHO05D002320 1.5e-17 92.4 59 83.1
RhsimPtG0003100 Rhododendron simsii HOM05D000806 ORTHO05D002324 1.5e-17 92.4 66 72.7
EL10As12g24027 Beta vulgaris HOM05D000806 ORTHO05D002320 2.6e-17 91.7 58 81.0
AUR62004684 Chenopodium quinoa HOM05D000806 ORTHO05D002320 2.6e-17 91.7 58 81.0
Hund01487 Selenicereus undatus HOM05D000806 ORTHO05D002320 2.6e-17 91.7 66 75.8
Lj2A1237T126 Lonicera japonica HOM05D000806 ORTHO05D002320 3.4e-17 91.3 66 77.3
EL10Ac4g10120 Beta vulgaris HOM05D000806 ORTHO05D002320 4.5e-17 90.9 58 81.0
Cc07_g17490 Coffea canephora HOM05D000806 ORTHO05D002320 7.6e-17 90.1 68 75.0
Gohir.A09G101966 Gossypium hirsutum HOM05D000806 ORTHO05D002320 7.6e-17 90.1 52 86.5
SMO364G0525 Selaginella moellendorffii HOM05D000806 ORTHO05D002320 9.9e-17 89.7 63 73.0
Psat0s1586g0240 Pisum sativum HOM05D000806 ORTHO05D002320 2.2e-16 88.6 73 67.1
Hund04050 Selenicereus undatus HOM05D000806 ORTHO05D002320 2.9e-16 88.2 66 69.7
SEGI_23528 Sequoiadendron giganteum HOM05D000388 ORTHO05D000473 2.9e-16 88.2 59 72.9
SEGI_26932 Sequoiadendron giganteum HOM05D000806 ORTHO05D002320 2.9e-16 88.2 59 72.9
SEGI_31685 Sequoiadendron giganteum HOM05D000806 ORTHO05D002320 2.9e-16 88.2 59 72.9
SEGI_26563 Sequoiadendron giganteum HOM05D000540 ORTHO05D002320 6.4e-16 87.0 59 72.9
Cre12.g484000 Chlamydomonas reinhardtii HOM05D000806 ORTHO05D002320 2.4e-15 85.1 52 80.8
Gohir.D04G129256 Gossypium hirsutum HOM05D000806 ORTHO05D002320 4.2e-15 84.3 53 81.1
Gorai.003G066100 Gossypium raimondii HOM05D000806 ORTHO05D002320 5.4e-15 84.0 52 82.7
Mapoly0068s0003 Marchantia polymorpha HOM05D000806 ORTHO05D002320 5.4e-15 84.0 49 87.8
Nn265s45953 Nelumbo nucifera HOM05D000806 ORTHO05D002320 5.4e-15 84.0 46 93.5
Hund28670 Selenicereus undatus HOM05D000806 ORTHO05D002320 1.2e-14 82.8 66 72.7
CiPaw.05G175100 Carya illinoinensis HOM05D000806 ORTHO05D002320 1.6e-14 82.4 58 74.1
Hund08023 Selenicereus undatus HOM05D000806 ORTHO05D002320 1.6e-14 82.4 66 68.2
CAN.G1693.6 Capsicum annuum HOM05D000806 ORTHO05D002320 5.1e-13 77.4 66 65.2
Lsat_1_v5_gn_7_98301 Lactuca sativa HOM05D000806 ORTHO05D002320 1.6e-11 72.4 47 78.7
Migut.D01360 Erythranthe guttata HOM05D000806 ORTHO05D002320 6.2e-11 70.5 44 84.1
BcaC04g21638 Brassica carinata HOM05D000806 ORTHO05D002320 1.1e-10 69.7 44 79.5
Cc00_g01670 Coffea canephora HOM05D000806 ORTHO05D002320 1.4e-10 69.3 38 86.8
Cc11_g02210 Coffea canephora HOM05D000806 ORTHO05D002320 1.4e-10 69.3 38 86.8
Solyc00g500065.1 Solanum lycopersicum HOM05D000806 ORTHO05D002320 2.4e-10 68.6 52 69.2
GSVIVG01010035001 Vitis vinifera HOM05D003557 ORTHO05D001267 5.8e-09 63.9 51 62.7
arahy.Tifrunner.gnm1.ann1.J4M97S Arachis hypogaea HOM05D000806 ORTHO05D002320 1.3e-08 62.8 58 62.1
Lj1g0000993 Lotus japonicus HOM05D000806 ORTHO05D002320 1.3e-08 62.8 66 59.1
BolSC46t61037H Brassica oleracea HOM05D000806 ORTHO05D002320 4.9e-08 60.8 36 75.0
BolSC45t60951H Brassica oleracea HOM05D000806 ORTHO05D002320 1.1e-07 59.7 32 84.4
Sed0009930 Sechium edule HOM05D000806 ORTHO05D002320 1.1e-07 59.7 58 62.1
Sc10g0007010 Simmondsia chinensis HOM05D000806 ORTHO05D002320 1.1e-07 59.7 32 90.6
BNapus_Darmor_BZH_scaffold_253p00210 Brassica napus HOM05D000806 ORTHO05D002320 1.6e-06 55.8 61 54.1
Potri.005G150200 Populus trichocarpa HOM05D000806 ORTHO05D002320 1.6e-06 55.8 50 62.0
Peaxi162Scf00021g00818 Petunia axillaris HOM05D000806 ORTHO05D002320 2.1e-06 55.5 31 83.9
Psat0s1150g0080 Pisum sativum HOM05D000216 ORTHO05D000634 2.7e-06 55.1 36 77.8


User provided reference genes

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