Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr00c0593g0576331 Helianthus annuus HOM05D000580 ORTHO05D001785 3.1e-23 110.9 55 100.0
Solyc03g122000.4 Solanum lycopersicum HOM05D000580 ORTHO05D001785 7.4e-17 89.7 50 86.0
CAN.G134.1 Capsicum annuum HOM05D000580 ORTHO05D001785 1.3e-16 89.0 43 100.0
CARHR282220 Cardamine hirsuta HOM05D000580 ORTHO05D001785 1.3e-16 89.0 43 100.0
MELO3C000399.2 Cucumis melo HOM05D000580 ORTHO05D001785 1.3e-16 89.0 43 100.0
Duzib026G0003 Durio zibethinus HOM05D000580 ORTHO05D001362 1.3e-16 89.0 43 100.0
Duzib124G0006 Durio zibethinus HOM05D000580 ORTHO05D001362 1.3e-16 89.0 43 100.0
Duzib237G0002 Durio zibethinus HOM05D000580 ORTHO05D001362 1.3e-16 89.0 43 100.0
Duzib256G0004 Durio zibethinus HOM05D000580 ORTHO05D001362 1.3e-16 89.0 43 100.0
Migut.D01433 Erythranthe guttata HOM05D000580 ORTHO05D001785 1.3e-16 89.0 43 100.0
Gohir.1Z078400 Gossypium hirsutum HOM05D000580 ORTHO05D001785 1.3e-16 89.0 43 100.0
Gohir.A02G022101 Gossypium hirsutum HOM05D000580 ORTHO05D001785 1.3e-16 89.0 43 100.0
Gohir.A07G130966 Gossypium hirsutum HOM05D000580 ORTHO05D001785 1.3e-16 89.0 43 100.0
Gohir.A09G083720 Gossypium hirsutum HOM05D000580 ORTHO05D001785 1.3e-16 89.0 43 100.0
Gohir.A09G103750 Gossypium hirsutum HOM05D000580 ORTHO05D001785 1.3e-16 89.0 43 100.0
Gohir.A12G178675 Gossypium hirsutum HOM05D000580 ORTHO05D001785 1.3e-16 89.0 43 100.0
Gohir.A12G228650 Gossypium hirsutum HOM05D000580 ORTHO05D001785 1.3e-16 89.0 43 100.0
HanXRQChr00c0314g0573481 Helianthus annuus HOM05D000580 ORTHO05D001785 1.3e-16 89.0 43 100.0
HanXRQChr00c0394g0574571 Helianthus annuus HOM05D000580 ORTHO05D001785 1.3e-16 89.0 43 100.0
HanXRQChr00c0557g0575751 Helianthus annuus HOM05D000580 ORTHO05D001785 1.3e-16 89.0 43 100.0
HanXRQChr01g0020251 Helianthus annuus HOM05D000580 ORTHO05D001785 1.3e-16 89.0 43 100.0
HanXRQChr02g0052531 Helianthus annuus HOM05D000580 ORTHO05D001785 1.3e-16 89.0 43 100.0
HanXRQChr04g0094331 Helianthus annuus HOM05D000580 ORTHO05D001785 1.3e-16 89.0 55 83.6
HanXRQChr04g0127521 Helianthus annuus HOM05D000580 ORTHO05D001785 1.3e-16 89.0 43 100.0
HanXRQChr10g0284351 Helianthus annuus HOM05D000580 ORTHO05D001785 1.3e-16 89.0 43 100.0
HanXRQChr10g0318091 Helianthus annuus HOM05D000580 ORTHO05D001785 1.3e-16 89.0 43 100.0
HanXRQChr11g0321061 Helianthus annuus HOM05D000580 ORTHO05D001785 1.3e-16 89.0 43 100.0
HanXRQChr11g0326931 Helianthus annuus HOM05D000580 ORTHO05D001785 1.3e-16 89.0 43 100.0
HanXRQChr12g0369831 Helianthus annuus HOM05D000580 ORTHO05D001785 1.3e-16 89.0 43 100.0
HanXRQCPg0580151 Helianthus annuus HOM05D000580 ORTHO05D001785 1.3e-16 89.0 43 100.0
Lj2P1237T69 Lonicera japonica HOM05D000580 ORTHO05D001785 1.3e-16 89.0 43 100.0
Lj2P1239T124 Lonicera japonica HOM05D000580 ORTHO05D001785 1.3e-16 89.0 43 100.0
PSO548G0060 Papaver somniferum HOM05D000580 ORTHO05D001785 1.3e-16 89.0 43 100.0
RcHm_v2.0_CPg0501911 Rosa chinensis HOM05D000580 ORTHO05D001785 1.3e-16 89.0 43 100.0
SalBow1G5124 Salvia bowleyana HOM05D000580 ORTHO05D001785 1.3e-16 89.0 43 100.0
Solyc00g500028.1 Solanum lycopersicum HOM05D000580 ORTHO05D001785 1.3e-16 89.0 43 100.0
Solyc00g500073.1 Solanum lycopersicum HOM05D000580 ORTHO05D001785 1.3e-16 89.0 43 100.0
Solyc00g500158.1 Solanum lycopersicum HOM05D000580 ORTHO05D001785 1.3e-16 89.0 43 100.0
Psat6g110880 Pisum sativum HOM05D000580 ORTHO05D001785 2.8e-16 87.8 55 81.8
AL2G20590 Arabidopsis lyrata HOM05D000580 ORTHO05D001785 3.7e-16 87.4 43 97.7
AL2G21690 Arabidopsis lyrata HOM05D000580 ORTHO05D001785 3.7e-16 87.4 43 97.7
ATCG00730 Arabidopsis thaliana HOM05D000580 ORTHO05D001785 3.7e-16 87.4 43 97.7
arahy.Tifrunner.gnm1.ann1.GZ00NU Arachis hypogaea HOM05D000580 ORTHO05D001785 3.7e-16 87.4 43 95.3
DCAR_032516 Daucus carota HOM05D000580 ORTHO05D001785 3.7e-16 87.4 43 97.7
Gohir.A03G137700 Gossypium hirsutum HOM05D000580 ORTHO05D001785 3.7e-16 87.4 43 97.7
HanXRQChr02g0032961 Helianthus annuus HOM05D000580 ORTHO05D001785 3.7e-16 87.4 43 97.7
HanXRQChr02g0052671 Helianthus annuus HOM05D000580 ORTHO05D001785 3.7e-16 87.4 43 97.7
HanXRQChr15g0486551 Helianthus annuus HOM05D000580 ORTHO05D001785 3.7e-16 87.4 43 97.7
PGR111G0048 Punica granatum HOM05D000580 ORTHO05D001785 3.7e-16 87.4 43 97.7
Ah.10g027190 Amaranthus hybridus HOM05D000580 ORTHO05D001785 4.8e-16 87.0 43 95.3
Ah.10g027480 Amaranthus hybridus HOM05D000580 ORTHO05D001785 4.8e-16 87.0 43 95.3
EL10As12g24033 Beta vulgaris HOM05D000580 ORTHO05D001785 4.8e-16 87.0 43 95.3
Potri.011G074600 Populus trichocarpa HOM05D000580 ORTHO05D001785 4.8e-16 87.0 43 95.3
Hund04056 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.8e-16 87.0 43 95.3
Hund08804 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.8e-16 87.0 43 95.3
Hund12526 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.8e-16 87.0 43 95.3
Hund15206 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.8e-16 87.0 43 95.3
Hund19319 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.8e-16 87.0 43 95.3
Hund26843 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.8e-16 87.0 43 95.3
Hund27466 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.8e-16 87.0 43 95.3
Hund27479 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.8e-16 87.0 43 95.3
Hund27576 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.8e-16 87.0 43 95.3
Hund27594 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.8e-16 87.0 43 95.3
Hund27893 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.8e-16 87.0 43 95.3
Hund27960 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.8e-16 87.0 43 95.3
Hund27983 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.8e-16 87.0 43 95.3
Hund28047 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.8e-16 87.0 43 95.3
Hund28107 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.8e-16 87.0 43 95.3
Hund28266 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.8e-16 87.0 43 95.3
Hund28324 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.8e-16 87.0 43 95.3
Hund28457 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.8e-16 87.0 43 95.3
Hund28467 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.8e-16 87.0 43 95.3
Hund28486 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.8e-16 87.0 43 95.3
Hund28517 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.8e-16 87.0 43 95.3
Hund28527 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.8e-16 87.0 43 95.3
Hund28630 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.8e-16 87.0 43 95.3
Hund28744 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.8e-16 87.0 43 95.3
Hund28757 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.8e-16 87.0 43 95.3
Hund28844 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.8e-16 87.0 43 95.3
Hund28888 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.8e-16 87.0 43 95.3
Hund29020 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.8e-16 87.0 43 95.3
Hund29034 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.8e-16 87.0 43 95.3
Hund29162 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.8e-16 87.0 43 95.3
Hund29215 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.8e-16 87.0 43 95.3
Hund29226 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.8e-16 87.0 43 95.3
Hund29232 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.8e-16 87.0 43 95.3
Hund29507 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.8e-16 87.0 43 95.3
Hund29523 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.8e-16 87.0 43 95.3
Hund29532 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.8e-16 87.0 43 95.3
Hund29535 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.8e-16 87.0 43 95.3
Hund29548 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.8e-16 87.0 43 95.3
Hund29561 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.8e-16 87.0 43 95.3
Hund29565 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.8e-16 87.0 43 95.3
Hund29572 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.8e-16 87.0 43 95.3
Hund29583 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.8e-16 87.0 43 95.3
Hund29591 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.8e-16 87.0 43 95.3
Hund29600 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.8e-16 87.0 43 95.3
Hund29603 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.8e-16 87.0 43 95.3
Hund29610 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.8e-16 87.0 43 95.3
Hund29665 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.8e-16 87.0 43 95.3
Hund29680 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.8e-16 87.0 43 95.3
Hund29716 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.8e-16 87.0 43 95.3
Hund29876 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.8e-16 87.0 43 95.3
Hund29955 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.8e-16 87.0 43 95.3
Hund30033 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.8e-16 87.0 43 95.3
Hund30067 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.8e-16 87.0 43 95.3
Hund30082 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.8e-16 87.0 43 95.3
Hund30302 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.8e-16 87.0 43 95.3
Hund30445 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.8e-16 87.0 43 95.3
Hund30485 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.8e-16 87.0 43 95.3
Hund30800 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.8e-16 87.0 43 95.3
CAN.G127.15 Capsicum annuum HOM05D000580 ORTHO05D001785 6.2e-16 86.7 43 97.7
CAN.G129.15 Capsicum annuum HOM05D000580 ORTHO05D001785 6.2e-16 86.7 43 97.7
CAN.G1595.5 Capsicum annuum HOM05D000580 ORTHO05D001785 6.2e-16 86.7 43 97.7
CAN.G219.33 Capsicum annuum HOM05D000580 ORTHO05D001785 6.2e-16 86.7 43 97.7
CAN.G307.12 Capsicum annuum HOM05D000580 ORTHO05D001785 6.2e-16 86.7 43 97.7
Gohir.A05G142175 Gossypium hirsutum HOM05D000580 ORTHO05D001785 6.2e-16 86.7 43 97.7
LjContig00318g0018353 Lotus japonicus HOM05D000580 ORTHO05D001785 6.2e-16 86.7 43 95.3
LjContig00319g0017313 Lotus japonicus HOM05D000580 ORTHO05D001785 6.2e-16 86.7 43 95.3
LjContig00319g0022083 Lotus japonicus HOM05D000580 ORTHO05D001785 6.2e-16 86.7 43 95.3
Nn002s41358 Nelumbo nucifera HOM05D000580 ORTHO05D001785 6.2e-16 86.7 43 97.7
Nn2g15463 Nelumbo nucifera HOM05D000580 ORTHO05D001785 6.2e-16 86.7 43 97.7
Nn8g40935 Nelumbo nucifera HOM05D000580 ORTHO05D001785 6.2e-16 86.7 43 97.7
HanXRQChr11g0345251 Helianthus annuus HOM05D000580 ORTHO05D001785 8.2e-16 86.3 43 97.7
C05p18880 Brassica napus HOM05D000580 ORTHO05D001785 1.1e-15 85.9 43 95.3
BolSC35t60666H Brassica oleracea HOM05D000580 ORTHO05D001785 1.1e-15 85.9 43 95.3
BolSC47t61078H Brassica oleracea HOM05D000580 ORTHO05D001785 1.1e-15 85.9 43 95.3
BraSC143t45634Z Brassica rapa HOM05D000580 ORTHO05D001785 1.1e-15 85.9 43 95.3
BraSC58t46499Z Brassica rapa HOM05D000580 ORTHO05D001785 1.1e-15 85.9 43 95.3
Medtr0002s0750 Medicago truncatula HOM05D000580 ORTHO05D001785 1.1e-15 85.9 43 95.3
Medtr4g034790 Medicago truncatula HOM05D000580 ORTHO05D001785 1.1e-15 85.9 43 95.3
arahy.Tifrunner.gnm1.ann1.I9279U Arachis hypogaea HOM05D000580 ORTHO05D001785 1.4e-15 85.5 43 90.7
CAN.G327.17 Capsicum annuum HOM05D000580 ORTHO05D001785 2.4e-15 84.7 43 93.0
HanXRQChr10g0303871 Helianthus annuus HOM05D000580 ORTHO05D001785 2.4e-15 84.7 41 97.6
arahy.Tifrunner.gnm1.ann1.J8VLEJ Arachis hypogaea HOM05D000580 ORTHO05D001785 3.1e-15 84.3 43 93.0
BraSC59t46574Z Brassica rapa HOM05D000580 ORTHO05D001785 3.1e-15 84.3 43 93.0
MELO3C033573.2 Cucumis melo HOM05D000580 ORTHO05D001785 3.1e-15 84.3 43 90.7
Lalb_Chr23g0274221 Lupinus albus HOM05D000580 ORTHO05D001785 4.0e-15 84.0 43 93.0
CAN.G1367.7 Capsicum annuum HOM05D000580 ORTHO05D001785 6.9e-15 83.2 43 95.3
Pp3c21_5670 Physcomitrium patens HOM05D000580 ORTHO05D001785 9.0e-15 82.8 43 88.4
Sc15g0001500 Simmondsia chinensis HOM05D000580 ORTHO05D001785 1.5e-14 82.0 43 93.0
Sopen05g009050 Solanum pennellii HOM05D000580 ORTHO05D001785 2.0e-14 81.6 40 97.5
Lalb_Chr03g0039301 Lupinus albus HOM05D000580 ORTHO05D001785 3.4e-14 80.9 43 90.7
arahy.Tifrunner.gnm1.ann1.7X81Z4 Arachis hypogaea HOM05D000580 ORTHO05D001785 4.5e-14 80.5 55 78.2
RcHm_v2.0_Chr3g0476911 Rosa chinensis HOM05D000580 ORTHO05D001785 5.8e-14 80.1 43 90.7
BraSC103t45448Z Brassica rapa HOM05D000580 ORTHO05D001785 7.6e-14 79.7 44 90.9
Psat5g206560 Pisum sativum HOM05D000580 ORTHO05D001785 7.6e-14 79.7 42 88.1
Lj1P929T39 Lonicera japonica HOM05D000580 ORTHO05D001785 1.3e-13 79.0 43 86.0
Gorai.004G150600 Gossypium raimondii HOM05D000580 ORTHO05D001785 2.2e-13 78.2 43 90.7
BraSC138t45556Z Brassica rapa HOM05D000580 ORTHO05D001785 1.9e-12 75.1 45 88.9
Gohir.A12G178640 Gossypium hirsutum HOM05D000580 ORTHO05D001785 1.9e-12 75.1 37 97.3
EL10Ac5g11666 Beta vulgaris HOM05D000580 ORTHO05D001785 2.5e-12 74.7 40 87.5
MCO11G579 Micromonas commoda HOM05D000580 ORTHO05D001785 3.2e-12 74.3 43 74.4
Ah.10g028960 Amaranthus hybridus HOM05D000580 ORTHO05D001785 6.1e-11 70.1 33 100.0
Gohir.A12G178615 Gossypium hirsutum HOM05D000580 ORTHO05D001785 6.1e-11 70.1 33 100.0
Gohir.D01G102086 Gossypium hirsutum HOM05D000580 ORTHO05D001785 6.1e-11 70.1 35 94.3
Gorai.001G191300 Gossypium raimondii HOM05D000580 ORTHO05D001785 1.0e-10 69.3 35 91.4
HanXRQChr16g0513491 Helianthus annuus HOM05D000580 ORTHO05D001785 1.3e-10 68.9 33 97.0
Hund28676 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.3e-10 68.9 37 83.8
BolSC29t60606H Brassica oleracea HOM05D000580 ORTHO05D001785 1.8e-10 68.6 33 97.0
Gohir.A01G137760 Gossypium hirsutum HOM05D000580 ORTHO05D001785 1.8e-10 68.6 36 88.9
Lalb_Chr18g0049331 Lupinus albus HOM05D000580 ORTHO05D001785 1.8e-10 68.6 46 73.9
Hund29543 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.8e-10 68.6 33 97.0
MELO3C034318.2 Cucumis melo HOM05D000580 ORTHO05D001785 3.0e-10 67.8 36 88.9
Gohir.D07G170866 Gossypium hirsutum HOM05D000580 ORTHO05D001785 5.1e-10 67.0 34 88.2
Gorai.004G123400 Gossypium raimondii HOM05D000580 ORTHO05D001785 5.1e-10 67.0 37 83.8
BolSC35t60733H Brassica oleracea HOM05D000580 ORTHO05D001785 4.3e-09 63.9 34 94.1
SEGI_18833 Sequoiadendron giganteum HOM05D000580 ORTHO05D001289 7.4e-09 63.2 53 64.2
CAN.G1478.6 Capsicum annuum HOM05D000580 ORTHO05D001785 1.3e-08 62.4 31 93.5
Nitab4.5_0001761g0200 Nicotiana tabacum HOM05D000445 ORTHO05D000314 4.8e-08 60.5 43 74.4
SMO086G0045 Selaginella moellendorffii HOM05D000580 ORTHO05D001785 6.3e-08 60.1 40 77.5
HanXRQChr05g0148481 Helianthus annuus HOM05D000580 ORTHO05D001785 6.9e-07 56.6 45 60.0


User provided reference genes

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