Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr00c0314g0573481 Helianthus annuus HOM05D000580 ORTHO05D001785 3.3e-37 157.9 83 100.0
CARHR282220 Cardamine hirsuta HOM05D000580 ORTHO05D001785 2.4e-35 151.8 81 97.5
Duzib026G0003 Durio zibethinus HOM05D000580 ORTHO05D001362 2.4e-35 151.8 81 97.5
Duzib124G0006 Durio zibethinus HOM05D000580 ORTHO05D001362 2.4e-35 151.8 81 97.5
Duzib237G0002 Durio zibethinus HOM05D000580 ORTHO05D001362 2.4e-35 151.8 81 97.5
Duzib256G0004 Durio zibethinus HOM05D000580 ORTHO05D001362 2.4e-35 151.8 81 97.5
Migut.D01433 Erythranthe guttata HOM05D000580 ORTHO05D001785 2.4e-35 151.8 81 97.5
Gohir.1Z078400 Gossypium hirsutum HOM05D000580 ORTHO05D001785 2.4e-35 151.8 81 97.5
Gohir.A02G022101 Gossypium hirsutum HOM05D000580 ORTHO05D001785 2.4e-35 151.8 81 97.5
Gohir.A09G103750 Gossypium hirsutum HOM05D000580 ORTHO05D001785 2.4e-35 151.8 81 97.5
HanXRQChr00c0394g0574571 Helianthus annuus HOM05D000580 ORTHO05D001785 2.4e-35 151.8 81 97.5
HanXRQChr00c0557g0575751 Helianthus annuus HOM05D000580 ORTHO05D001785 2.4e-35 151.8 81 97.5
HanXRQChr01g0020251 Helianthus annuus HOM05D000580 ORTHO05D001785 2.4e-35 151.8 81 97.5
HanXRQChr04g0127521 Helianthus annuus HOM05D000580 ORTHO05D001785 2.4e-35 151.8 81 97.5
HanXRQChr10g0284351 Helianthus annuus HOM05D000580 ORTHO05D001785 2.4e-35 151.8 81 97.5
HanXRQChr10g0318091 Helianthus annuus HOM05D000580 ORTHO05D001785 2.4e-35 151.8 81 97.5
HanXRQChr11g0326931 Helianthus annuus HOM05D000580 ORTHO05D001785 2.4e-35 151.8 81 97.5
HanXRQChr12g0369831 Helianthus annuus HOM05D000580 ORTHO05D001785 2.4e-35 151.8 81 97.5
HanXRQCPg0580151 Helianthus annuus HOM05D000580 ORTHO05D001785 2.4e-35 151.8 81 97.5
Lj2P1237T69 Lonicera japonica HOM05D000580 ORTHO05D001785 2.4e-35 151.8 81 97.5
PSO548G0060 Papaver somniferum HOM05D000580 ORTHO05D001785 2.4e-35 151.8 81 97.5
SalBow1G5124 Salvia bowleyana HOM05D000580 ORTHO05D001785 2.4e-35 151.8 81 97.5
Solyc00g500028.1 Solanum lycopersicum HOM05D000580 ORTHO05D001785 2.4e-35 151.8 81 97.5
Solyc00g500073.1 Solanum lycopersicum HOM05D000580 ORTHO05D001785 2.4e-35 151.8 81 97.5
Solyc00g500158.1 Solanum lycopersicum HOM05D000580 ORTHO05D001785 2.4e-35 151.8 81 97.5
MELO3C000399.2 Cucumis melo HOM05D000580 ORTHO05D001785 3.1e-35 151.4 80 97.5
Gohir.A12G178675 Gossypium hirsutum HOM05D000580 ORTHO05D001785 3.1e-35 151.4 81 96.3
HanXRQChr11g0321061 Helianthus annuus HOM05D000580 ORTHO05D001785 3.1e-35 151.4 80 97.5
AL2G20590 Arabidopsis lyrata HOM05D000580 ORTHO05D001785 6.9e-35 150.2 81 96.3
AL2G21690 Arabidopsis lyrata HOM05D000580 ORTHO05D001785 6.9e-35 150.2 81 96.3
ATCG00730 Arabidopsis thaliana HOM05D000580 ORTHO05D001785 6.9e-35 150.2 81 96.3
DCAR_032516 Daucus carota HOM05D000580 ORTHO05D001785 6.9e-35 150.2 81 96.3
HanXRQChr02g0052671 Helianthus annuus HOM05D000580 ORTHO05D001785 6.9e-35 150.2 81 96.3
PGR111G0048 Punica granatum HOM05D000580 ORTHO05D001785 6.9e-35 150.2 81 96.3
Ah.10g027190 Amaranthus hybridus HOM05D000580 ORTHO05D001785 9.1e-35 149.8 81 95.1
Ah.10g027480 Amaranthus hybridus HOM05D000580 ORTHO05D001785 9.1e-35 149.8 81 95.1
Hund04056 Selenicereus undatus HOM05D000580 ORTHO05D001785 9.1e-35 149.8 81 95.1
Hund08804 Selenicereus undatus HOM05D000580 ORTHO05D001785 9.1e-35 149.8 81 95.1
Hund12526 Selenicereus undatus HOM05D000580 ORTHO05D001785 9.1e-35 149.8 81 95.1
Hund15206 Selenicereus undatus HOM05D000580 ORTHO05D001785 9.1e-35 149.8 81 95.1
Hund19319 Selenicereus undatus HOM05D000580 ORTHO05D001785 9.1e-35 149.8 81 95.1
Hund26843 Selenicereus undatus HOM05D000580 ORTHO05D001785 9.1e-35 149.8 81 95.1
Hund27466 Selenicereus undatus HOM05D000580 ORTHO05D001785 9.1e-35 149.8 81 95.1
Hund27479 Selenicereus undatus HOM05D000580 ORTHO05D001785 9.1e-35 149.8 81 95.1
Hund27576 Selenicereus undatus HOM05D000580 ORTHO05D001785 9.1e-35 149.8 81 95.1
Hund27893 Selenicereus undatus HOM05D000580 ORTHO05D001785 9.1e-35 149.8 81 95.1
Hund27960 Selenicereus undatus HOM05D000580 ORTHO05D001785 9.1e-35 149.8 81 95.1
Hund27983 Selenicereus undatus HOM05D000580 ORTHO05D001785 9.1e-35 149.8 81 95.1
Hund28047 Selenicereus undatus HOM05D000580 ORTHO05D001785 9.1e-35 149.8 81 95.1
Hund28107 Selenicereus undatus HOM05D000580 ORTHO05D001785 9.1e-35 149.8 81 95.1
Hund28266 Selenicereus undatus HOM05D000580 ORTHO05D001785 9.1e-35 149.8 81 95.1
Hund28324 Selenicereus undatus HOM05D000580 ORTHO05D001785 9.1e-35 149.8 81 95.1
Hund28457 Selenicereus undatus HOM05D000580 ORTHO05D001785 9.1e-35 149.8 81 95.1
Hund28467 Selenicereus undatus HOM05D000580 ORTHO05D001785 9.1e-35 149.8 81 95.1
Hund28486 Selenicereus undatus HOM05D000580 ORTHO05D001785 9.1e-35 149.8 81 95.1
Hund28517 Selenicereus undatus HOM05D000580 ORTHO05D001785 9.1e-35 149.8 81 95.1
Hund28527 Selenicereus undatus HOM05D000580 ORTHO05D001785 9.1e-35 149.8 81 95.1
Hund28630 Selenicereus undatus HOM05D000580 ORTHO05D001785 9.1e-35 149.8 81 95.1
Hund28744 Selenicereus undatus HOM05D000580 ORTHO05D001785 9.1e-35 149.8 81 95.1
Hund28757 Selenicereus undatus HOM05D000580 ORTHO05D001785 9.1e-35 149.8 81 95.1
Hund28844 Selenicereus undatus HOM05D000580 ORTHO05D001785 9.1e-35 149.8 81 95.1
Hund28888 Selenicereus undatus HOM05D000580 ORTHO05D001785 9.1e-35 149.8 81 95.1
Hund29020 Selenicereus undatus HOM05D000580 ORTHO05D001785 9.1e-35 149.8 81 95.1
Hund29034 Selenicereus undatus HOM05D000580 ORTHO05D001785 9.1e-35 149.8 81 95.1
Hund29162 Selenicereus undatus HOM05D000580 ORTHO05D001785 9.1e-35 149.8 81 95.1
Hund29215 Selenicereus undatus HOM05D000580 ORTHO05D001785 9.1e-35 149.8 81 95.1
Hund29226 Selenicereus undatus HOM05D000580 ORTHO05D001785 9.1e-35 149.8 81 95.1
Hund29232 Selenicereus undatus HOM05D000580 ORTHO05D001785 9.1e-35 149.8 81 95.1
Hund29507 Selenicereus undatus HOM05D000580 ORTHO05D001785 9.1e-35 149.8 81 95.1
Hund29523 Selenicereus undatus HOM05D000580 ORTHO05D001785 9.1e-35 149.8 81 95.1
Hund29532 Selenicereus undatus HOM05D000580 ORTHO05D001785 9.1e-35 149.8 81 95.1
Hund29535 Selenicereus undatus HOM05D000580 ORTHO05D001785 9.1e-35 149.8 81 95.1
Hund29548 Selenicereus undatus HOM05D000580 ORTHO05D001785 9.1e-35 149.8 81 95.1
Hund29561 Selenicereus undatus HOM05D000580 ORTHO05D001785 9.1e-35 149.8 81 95.1
Hund29565 Selenicereus undatus HOM05D000580 ORTHO05D001785 9.1e-35 149.8 81 95.1
Hund29572 Selenicereus undatus HOM05D000580 ORTHO05D001785 9.1e-35 149.8 81 95.1
Hund29583 Selenicereus undatus HOM05D000580 ORTHO05D001785 9.1e-35 149.8 81 95.1
Hund29591 Selenicereus undatus HOM05D000580 ORTHO05D001785 9.1e-35 149.8 81 95.1
Hund29600 Selenicereus undatus HOM05D000580 ORTHO05D001785 9.1e-35 149.8 81 95.1
Hund29603 Selenicereus undatus HOM05D000580 ORTHO05D001785 9.1e-35 149.8 81 95.1
Hund29610 Selenicereus undatus HOM05D000580 ORTHO05D001785 9.1e-35 149.8 81 95.1
Hund29680 Selenicereus undatus HOM05D000580 ORTHO05D001785 9.1e-35 149.8 81 95.1
Hund29716 Selenicereus undatus HOM05D000580 ORTHO05D001785 9.1e-35 149.8 81 95.1
Hund29876 Selenicereus undatus HOM05D000580 ORTHO05D001785 9.1e-35 149.8 81 95.1
Hund29955 Selenicereus undatus HOM05D000580 ORTHO05D001785 9.1e-35 149.8 81 95.1
Hund30033 Selenicereus undatus HOM05D000580 ORTHO05D001785 9.1e-35 149.8 81 95.1
Hund30067 Selenicereus undatus HOM05D000580 ORTHO05D001785 9.1e-35 149.8 81 95.1
Hund30082 Selenicereus undatus HOM05D000580 ORTHO05D001785 9.1e-35 149.8 81 95.1
Hund30302 Selenicereus undatus HOM05D000580 ORTHO05D001785 9.1e-35 149.8 81 95.1
Hund30445 Selenicereus undatus HOM05D000580 ORTHO05D001785 9.1e-35 149.8 81 95.1
Hund30485 Selenicereus undatus HOM05D000580 ORTHO05D001785 9.1e-35 149.8 81 95.1
Hund30800 Selenicereus undatus HOM05D000580 ORTHO05D001785 9.1e-35 149.8 81 95.1
CAN.G129.15 Capsicum annuum HOM05D000580 ORTHO05D001785 1.2e-34 149.4 81 96.3
CAN.G134.1 Capsicum annuum HOM05D000580 ORTHO05D001785 1.2e-34 149.4 81 96.3
CAN.G1595.5 Capsicum annuum HOM05D000580 ORTHO05D001785 1.2e-34 149.4 81 96.3
CAN.G307.12 Capsicum annuum HOM05D000580 ORTHO05D001785 1.2e-34 149.4 81 96.3
HanXRQChr02g0052531 Helianthus annuus HOM05D000580 ORTHO05D001785 1.2e-34 149.4 81 96.3
Nn002s41358 Nelumbo nucifera HOM05D000580 ORTHO05D001785 1.2e-34 149.4 81 96.3
Potri.011G074600 Populus trichocarpa HOM05D000580 ORTHO05D001785 1.2e-34 149.4 80 95.0
Hund29665 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.2e-34 149.4 80 95.0
HanXRQChr11g0345251 Helianthus annuus HOM05D000580 ORTHO05D001785 1.5e-34 149.1 81 96.3
Lalb_Chr23g0274221 Lupinus albus HOM05D000580 ORTHO05D001785 1.5e-34 149.1 83 94.0
C05p18880 Brassica napus HOM05D000580 ORTHO05D001785 2.0e-34 148.7 81 95.1
BolSC35t60666H Brassica oleracea HOM05D000580 ORTHO05D001785 2.0e-34 148.7 81 95.1
BolSC47t61078H Brassica oleracea HOM05D000580 ORTHO05D001785 2.0e-34 148.7 81 95.1
BraSC143t45634Z Brassica rapa HOM05D000580 ORTHO05D001785 2.0e-34 148.7 81 95.1
Medtr0002s0750 Medicago truncatula HOM05D000580 ORTHO05D001785 2.0e-34 148.7 81 95.1
HanXRQChr15g0486551 Helianthus annuus HOM05D000580 ORTHO05D001785 3.4e-34 147.9 81 95.1
LjContig00318g0018353 Lotus japonicus HOM05D000580 ORTHO05D001785 3.4e-34 147.9 81 93.8
LjContig00319g0017313 Lotus japonicus HOM05D000580 ORTHO05D001785 3.4e-34 147.9 81 93.8
LjContig00319g0022083 Lotus japonicus HOM05D000580 ORTHO05D001785 3.4e-34 147.9 81 93.8
Medtr4g034790 Medicago truncatula HOM05D000580 ORTHO05D001785 5.9e-34 147.1 81 93.8
EL10As12g24033 Beta vulgaris HOM05D000580 ORTHO05D001785 1.3e-33 146.0 78 94.9
CAN.G1367.7 Capsicum annuum HOM05D000580 ORTHO05D001785 1.3e-33 146.0 81 95.1
CAN.G327.17 Capsicum annuum HOM05D000580 ORTHO05D001785 1.7e-33 145.6 81 91.4
arahy.Tifrunner.gnm1.ann1.I9279U Arachis hypogaea HOM05D000580 ORTHO05D001785 5.0e-33 144.1 81 88.9
Gohir.A03G137700 Gossypium hirsutum HOM05D000580 ORTHO05D001785 8.5e-33 143.3 81 93.8
Sc15g0001500 Simmondsia chinensis HOM05D000580 ORTHO05D001785 8.5e-33 143.3 81 92.6
BraSC103t45448Z Brassica rapa HOM05D000580 ORTHO05D001785 1.9e-32 142.1 81 92.6
Hund27594 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.9e-32 142.1 76 94.7
arahy.Tifrunner.gnm1.ann1.GZ00NU Arachis hypogaea HOM05D000580 ORTHO05D001785 2.5e-32 141.7 77 92.2
Lj1P929T39 Lonicera japonica HOM05D000580 ORTHO05D001785 3.2e-32 141.4 81 88.9
CAN.G127.15 Capsicum annuum HOM05D000580 ORTHO05D001785 5.5e-32 140.6 80 92.5
Lj2P1239T124 Lonicera japonica HOM05D000580 ORTHO05D001785 5.5e-32 140.6 74 97.3
Pp3c21_5670 Physcomitrium patens HOM05D000580 ORTHO05D001785 5.5e-32 140.6 81 88.9
Psat5g206560 Pisum sativum HOM05D000580 ORTHO05D001785 5.5e-32 140.6 81 88.9
arahy.Tifrunner.gnm1.ann1.J8VLEJ Arachis hypogaea HOM05D000580 ORTHO05D001785 2.1e-31 138.7 77 90.9
CAN.G219.33 Capsicum annuum HOM05D000580 ORTHO05D001785 2.1e-31 138.7 81 90.1
BraSC138t45556Z Brassica rapa HOM05D000580 ORTHO05D001785 4.7e-31 137.5 82 91.5
BraSC59t46574Z Brassica rapa HOM05D000580 ORTHO05D001785 4.7e-31 137.5 77 90.9
RcHm_v2.0_Chr3g0476911 Rosa chinensis HOM05D000580 ORTHO05D001785 1.8e-30 135.6 81 88.9
Psat6g110880 Pisum sativum HOM05D000580 ORTHO05D001785 6.7e-30 133.7 72 94.4
Gohir.A07G130966 Gossypium hirsutum HOM05D000580 ORTHO05D001785 2.0e-29 132.1 70 95.7
Gohir.A01G137760 Gossypium hirsutum HOM05D000580 ORTHO05D001785 1.8e-27 125.6 81 85.2
Nn8g40935 Nelumbo nucifera HOM05D000580 ORTHO05D001785 5.3e-27 124.0 67 95.5
CAN.G1478.6 Capsicum annuum HOM05D000580 ORTHO05D001785 7.0e-27 123.6 81 82.7
Gohir.A09G083720 Gossypium hirsutum HOM05D000580 ORTHO05D001785 2.6e-26 121.7 61 100.0
Gohir.A12G228650 Gossypium hirsutum HOM05D000580 ORTHO05D001785 2.6e-26 121.7 61 100.0
MCO11G579 Micromonas commoda HOM05D000580 ORTHO05D001785 2.6e-26 121.7 81 70.4
RcHm_v2.0_CPg0501911 Rosa chinensis HOM05D000580 ORTHO05D001785 2.6e-26 121.7 61 100.0
Gohir.A12G178640 Gossypium hirsutum HOM05D000580 ORTHO05D001785 5.9e-26 120.6 80 82.5
EL10Ac5g11666 Beta vulgaris HOM05D000580 ORTHO05D001785 7.7e-26 120.2 78 80.8
HanXRQChr02g0032961 Helianthus annuus HOM05D000580 ORTHO05D001785 7.7e-26 120.2 61 98.4
Gohir.A05G142175 Gossypium hirsutum HOM05D000580 ORTHO05D001785 1.3e-25 119.4 61 98.4
Nn2g15463 Nelumbo nucifera HOM05D000580 ORTHO05D001785 1.3e-25 119.4 61 98.4
BraSC58t46499Z Brassica rapa HOM05D000580 ORTHO05D001785 2.2e-25 118.6 61 96.7
MELO3C033573.2 Cucumis melo HOM05D000580 ORTHO05D001785 6.5e-25 117.1 61 93.4
HanXRQChr10g0303871 Helianthus annuus HOM05D000580 ORTHO05D001785 6.5e-25 117.1 59 98.3
Solyc03g122000.4 Solanum lycopersicum HOM05D000580 ORTHO05D001785 2.5e-24 115.2 65 92.3
Hund28676 Selenicereus undatus HOM05D000580 ORTHO05D001785 7.2e-24 113.6 81 74.1
Lalb_Chr03g0039301 Lupinus albus HOM05D000580 ORTHO05D001785 1.4e-22 109.4 61 88.5
Sopen05g009050 Solanum pennellii HOM05D000580 ORTHO05D001785 3.0e-22 108.2 60 91.7
Gorai.004G150600 Gossypium raimondii HOM05D000580 ORTHO05D001785 5.2e-22 107.5 61 90.2
HanXRQChr04g0094331 Helianthus annuus HOM05D000580 ORTHO05D001785 2.2e-20 102.1 55 94.5
arahy.Tifrunner.gnm1.ann1.7X81Z4 Arachis hypogaea HOM05D000580 ORTHO05D001785 6.3e-20 100.5 55 90.9
Ah.10g028960 Amaranthus hybridus HOM05D000580 ORTHO05D001785 8.2e-20 100.1 53 96.2
Gohir.A12G178615 Gossypium hirsutum HOM05D000580 ORTHO05D001785 1.1e-19 99.8 53 94.3
HanXRQChr16g0513491 Helianthus annuus HOM05D000580 ORTHO05D001785 1.8e-19 99.0 53 94.3
BolSC29t60606H Brassica oleracea HOM05D000580 ORTHO05D001785 2.4e-19 98.6 53 94.3
Hund29543 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.4e-19 98.6 53 94.3
Gohir.D01G102086 Gossypium hirsutum HOM05D000580 ORTHO05D001785 7.0e-19 97.1 55 90.9
Gorai.004G123400 Gossypium raimondii HOM05D000580 ORTHO05D001785 1.2e-18 96.3 55 85.5
Gorai.001G191300 Gossypium raimondii HOM05D000580 ORTHO05D001785 2.0e-18 95.5 55 85.5
HanXRQChr05g0148481 Helianthus annuus HOM05D000580 ORTHO05D001785 2.7e-18 95.1 72 68.1
BolSC35t60733H Brassica oleracea HOM05D000580 ORTHO05D001785 5.9e-18 94.0 54 92.6
Lalb_Chr18g0049331 Lupinus albus HOM05D000580 ORTHO05D001785 7.7e-18 93.6 61 78.7
Gohir.D07G170866 Gossypium hirsutum HOM05D000580 ORTHO05D001785 2.9e-17 91.7 55 80.0
SMO086G0045 Selaginella moellendorffii HOM05D000580 ORTHO05D001785 3.8e-17 91.3 73 71.2
Nitab4.5_0001761g0200 Nicotiana tabacum HOM05D000445 ORTHO05D000314 8.5e-17 90.1 62 79.0
HanXRQChr00c0593g0576331 Helianthus annuus HOM05D000580 ORTHO05D001785 2.5e-16 88.6 43 100.0
MELO3C034318.2 Cucumis melo HOM05D000580 ORTHO05D001785 9.4e-16 86.7 53 84.9
Glyma.15G114600 Glycine max HOM05D000580 ORTHO05D001785 7.5e-13 77.0 45 84.4
Potri.013G088900 Populus trichocarpa HOM05D000580 ORTHO05D001785 8.3e-12 73.6 55 70.9
Migut.D01367 Erythranthe guttata HOM05D000580 ORTHO05D001785 1.0e-09 66.6 34 100.0
arahy.Tifrunner.gnm1.ann1.G4W793 Arachis hypogaea HOM05D000680 ORTHO05D001785 1.3e-09 66.2 33 84.8
CARHR194070 Cardamine hirsuta HOM05D000580 ORTHO05D001785 1.7e-09 65.9 53 69.8
arahy.Tifrunner.gnm1.ann1.BY1G47 Arachis hypogaea HOM05D000743 ORTHO05D001785 3.8e-09 64.7 43 79.1
SEGI_18833 Sequoiadendron giganteum HOM05D000580 ORTHO05D001289 1.1e-08 63.2 35 85.7
Lalb_Chr18g0049681 Lupinus albus HOM05D000580 ORTHO05D001785 7.2e-08 60.5 47 72.3
Lsat_1_v5_gn_2_129581 Lactuca sativa HOM05D000580 ORTHO05D011423 2.1e-07 58.9 29 100.0
HanXRQChr05g0152591 Helianthus annuus HOM05D000580 ORTHO05D001785 2.7e-07 58.5 33 93.9
BolSC49t61166H Brassica oleracea HOM05D000580 ORTHO05D001785 8.0e-07 57.0 33 90.9
HanXRQChr16g0529051 Helianthus annuus HOM05D000580 ORTHO05D001785 6.8e-06 53.9 31 93.5


User provided reference genes

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