Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr00c0062g0571541 Helianthus annuus HOM05D006226 ORTHO05D007738 2.3e-75 285.4 138 100.0
HanXRQChr12g0354991 Helianthus annuus HOM05D006226 ORTHO05D007738 2.3e-75 285.4 138 100.0
ECA234G2375 Erigeron canadensis HOM05D006226 ORTHO05D007738 1.7e-46 189.5 145 67.6
ECA233G1203 Erigeron canadensis HOM05D006226 ORTHO05D007738 2.9e-46 188.7 145 66.2
Lsat_1_v5_gn_8_3640 Lactuca sativa HOM05D006226 ORTHO05D007738 1.5e-45 186.4 140 69.3
Lsat_1_v5_gn_4_168221 Lactuca sativa HOM05D006226 ORTHO05D007738 4.0e-35 151.8 122 66.4
Migut.C00317 Erythranthe guttata HOM05D006226 ORTHO05D007738 1.4e-32 143.3 149 51.0
SalBow6G3053 Salvia bowleyana HOM05D006226 ORTHO05D007738 1.0e-30 137.1 147 49.7
Lj7C652G7 Lonicera japonica HOM05D006226 ORTHO05D007738 1.3e-30 136.7 149 51.7
Oeu002240.1 Olea europaea HOM05D006226 ORTHO05D007738 1.7e-30 136.3 162 46.3
CANSAT56G2062 Cannabis sativa HOM05D006226 ORTHO05D007738 1.5e-29 133.3 168 44.0
Hma1.2p1_1463F.1_g285100 Hydrangea macrophylla HOM05D006226 ORTHO05D007738 1.9e-29 132.9 141 51.1
Medtr6g087530 Medicago truncatula HOM05D006226 ORTHO05D007738 2.5e-29 132.5 167 41.9
Hma1.2p1_1463F.1_g285110 Hydrangea macrophylla HOM05D006226 ORTHO05D007738 5.5e-29 131.3 153 47.7
vmacro20706 Vaccinium macrocarpon HOM05D006226 ORTHO05D007738 5.5e-29 131.3 172 44.2
GSVIVG01015381001 Vitis vinifera HOM05D006226 ORTHO05D007738 5.5e-29 131.3 173 45.7
BcaB06g26659 Brassica carinata HOM05D006226 ORTHO05D007738 7.2e-29 131.0 126 51.6
Ciclev10007624m.g Citrus clementina HOM05D006226 ORTHO05D007738 7.2e-29 131.0 172 41.9
arahy.Tifrunner.gnm1.ann1.9IQ1SY Arachis hypogaea HOM05D006226 ORTHO05D007738 9.5e-29 130.6 169 43.2
arahy.Tifrunner.gnm1.ann1.ZKYF3I Arachis hypogaea HOM05D006226 ORTHO05D007738 2.1e-28 129.4 169 43.2
CANSAT56G4481 Cannabis sativa HOM05D006226 ORTHO05D007738 2.1e-28 129.4 168 43.5
PGSC0003DMG400026545 Solanum tuberosum HOM05D006226 ORTHO05D007738 2.8e-28 129.0 169 42.6
CiPaw.03G218400 Carya illinoinensis HOM05D006226 ORTHO05D007738 4.7e-28 128.3 168 46.4
Thhalv10002431m.g Eutrema salsugineum HOM05D006226 ORTHO05D007738 4.7e-28 128.3 129 49.6
Sp3g22350 Schrenkiella parvula HOM05D006226 ORTHO05D007738 6.1e-28 127.9 130 50.0
Dinv36642 Davidia involucrata HOM05D006226 ORTHO05D007738 8.0e-28 127.5 170 44.1
PSO210G1415 Papaver somniferum HOM05D006226 ORTHO05D007738 1.4e-27 126.7 166 42.8
Gohir.D05G025200 Gossypium hirsutum HOM05D006226 ORTHO05D007738 1.8e-27 126.3 161 44.1
Psat1g043440 Pisum sativum HOM05D006226 ORTHO05D007738 2.3e-27 125.9 172 40.7
Nitab4.5_0006735g0020 Nicotiana tabacum HOM05D006226 ORTHO05D007738 3.0e-27 125.6 168 41.7
Carub.0003s2495 Capsella rubella HOM05D006226 ORTHO05D007738 4.0e-27 125.2 130 50.0
AT3G24560 Arabidopsis thaliana HOM05D006226 ORTHO05D007738 5.2e-27 124.8 130 48.5
Manes.16G114900 Manihot esculenta HOM05D006226 ORTHO05D007738 5.2e-27 124.8 171 42.7
Solyc11g067030.2 Solanum lycopersicum HOM05D006226 ORTHO05D007738 5.2e-27 124.8 169 41.4
AL3G40100 Arabidopsis lyrata HOM05D006226 ORTHO05D007738 6.8e-27 124.4 130 47.7
Sopen11g026750 Solanum pennellii HOM05D006226 ORTHO05D007738 6.8e-27 124.4 171 41.5
FAN28G0796 Fragaria x ananassa HOM05D006226 ORTHO05D007738 8.9e-27 124.0 163 43.6
Gorai.009G025300 Gossypium raimondii HOM05D006226 ORTHO05D007738 1.2e-26 123.6 160 44.4
CARHR100790 Cardamine hirsuta HOM05D006226 ORTHO05D007738 1.5e-26 123.2 130 48.5
FvH4_1g04570 Fragaria vesca HOM05D006226 ORTHO05D007738 1.5e-26 123.2 160 43.8
FAN19G1825 Fragaria x ananassa HOM05D006226 ORTHO05D007738 1.5e-26 123.2 160 43.8
FAN26G0472 Fragaria x ananassa HOM05D006226 ORTHO05D007738 1.5e-26 123.2 160 43.8
Eucgr.C01033 Eucalyptus grandis HOM05D006226 ORTHO05D007738 2.0e-26 122.9 172 40.7
COL.COLO4_34848 Corchorus olitorius HOM05D006226 ORTHO05D007738 2.6e-26 122.5 165 43.0
BcaC06g35722 Brassica carinata HOM05D006226 ORTHO05D007738 3.4e-26 122.1 126 50.8
C07p11670 Brassica napus HOM05D006226 ORTHO05D007738 3.4e-26 122.1 126 50.8
BolC7t41639H Brassica oleracea HOM05D006226 ORTHO05D007738 3.4e-26 122.1 126 50.8
Cfa003249 Carpinus fangiana HOM05D006226 ORTHO05D007738 3.4e-26 122.1 182 39.6
Migut.G00900 Erythranthe guttata HOM05D006226 ORTHO05D007738 3.4e-26 122.1 150 47.3
FAN23G2910 Fragaria x ananassa HOM05D006226 ORTHO05D007738 3.4e-26 122.1 160 43.1
Glyma.07G085400 Glycine max HOM05D006226 ORTHO05D007738 4.4e-26 121.7 172 39.0
Lalb_Chr06g0174401 Lupinus albus HOM05D006226 ORTHO05D007738 4.4e-26 121.7 170 40.6
PSO210G0226 Papaver somniferum HOM05D006226 ORTHO05D007738 4.4e-26 121.7 166 41.6
Aa31sc29G50 Aethionema arabicum HOM05D006226 ORTHO05D007738 5.7e-26 121.3 131 46.6
Glyma.09G191500 Glycine max HOM05D006226 ORTHO05D007738 5.7e-26 121.3 172 39.0
QL02p040023 Quercus lobata HOM05D006226 ORTHO05D007738 5.7e-26 121.3 183 38.3
Nitab4.5_0004070g0080 Nicotiana tabacum HOM05D006226 ORTHO05D007738 7.5e-26 120.9 170 41.2
A07p07760 Brassica napus HOM05D006226 ORTHO05D007738 1.3e-25 120.2 126 48.4
Rhsim01G0096900 Rhododendron simsii HOM05D006226 ORTHO05D007738 1.3e-25 120.2 165 41.2
CAN.G644.14 Capsicum annuum HOM05D006226 ORTHO05D007738 1.7e-25 119.8 169 40.8
TPR.G10046 Trifolium pratense HOM05D006226 ORTHO05D007738 1.7e-25 119.8 172 39.5
ClCG06G008620 Citrullus lanatus HOM05D006226 ORTHO05D007738 2.2e-25 119.4 162 40.1
Lj2g0027193 Lotus japonicus HOM05D006226 ORTHO05D007738 2.2e-25 119.4 169 39.1
BraA07t28567Z Brassica rapa HOM05D006226 ORTHO05D007738 2.9e-25 119.0 126 48.4
Peaxi162Scf01284g00019 Petunia axillaris HOM05D006226 ORTHO05D007738 2.9e-25 119.0 170 41.8
MD15G1183800 Malus domestica HOM05D006226 ORTHO05D007738 4.9e-25 118.2 176 40.9
TAR383G0867 Trochodendron aralioides HOM05D006226 ORTHO05D007738 4.9e-25 118.2 167 41.9
PGR142G1694 Punica granatum HOM05D006226 ORTHO05D007738 8.3e-25 117.5 139 46.8
MELO3C024624.2 Cucumis melo HOM05D006226 ORTHO05D007738 1.1e-24 117.1 163 41.1
Gohir.A05G023700 Gossypium hirsutum HOM05D006226 ORTHO05D007738 1.1e-24 117.1 145 42.1
Cc06_g09770 Coffea canephora HOM05D006226 ORTHO05D007738 3.2e-24 115.5 172 40.1
RcHm_v2.0_Chr2g0090271 Rosa chinensis HOM05D006226 ORTHO05D007738 3.2e-24 115.5 159 43.4
Migut.K01516 Erythranthe guttata HOM05D006226 ORTHO05D007738 7.0e-24 114.4 147 46.9
Sed0016798 Sechium edule HOM05D006226 ORTHO05D007738 7.0e-24 114.4 161 41.0
Prupe.7G232400 Prunus persica HOM05D006226 ORTHO05D007738 1.2e-23 113.6 171 39.2
Sabra18G0068600 Salix brachista HOM05D006226 ORTHO05D007738 3.5e-23 112.1 164 40.2
Zm00001eb237720 Zea mays HOM05D006226 ORTHO05D007738 2.3e-22 109.4 159 39.0
DCAR_002532 Daucus carota HOM05D006226 ORTHO05D007738 3.9e-22 108.6 177 38.4
Ah.14g081980 Amaranthus hybridus HOM05D006226 ORTHO05D007738 6.6e-22 107.8 164 37.8
CSS0010508 Camellia sinensis var. sinensis HOM05D006226 ORTHO05D007738 2.5e-21 105.9 136 44.9
Phvul.004G164600 Phaseolus vulgaris HOM05D006226 ORTHO05D007738 5.6e-21 104.8 172 36.6
Hund09200 Selenicereus undatus HOM05D006226 ORTHO05D007738 5.6e-21 104.8 162 38.3
AUR62021510 Chenopodium quinoa HOM05D006226 ORTHO05D007738 2.8e-20 102.4 168 36.3
Nitab4.5_0004070g0110 Nicotiana tabacum HOM05D006226 ORTHO05D007738 4.7e-20 101.7 167 36.5
VMungo0464G1421 Vigna mungo HOM05D006226 ORTHO05D007738 6.1e-20 101.3 165 35.2
Aqoxy7G03848 Aquilegia oxysepala HOM05D006226 ORTHO05D007738 1.8e-19 99.8 161 39.8
AUR62010999 Chenopodium quinoa HOM05D006226 ORTHO05D007738 8.9e-19 97.4 166 36.1
ATR0315G018 Amborella trichopoda HOM05D006226 ORTHO05D007738 2.6e-18 95.9 192 32.3
SGA_v2.0_scaffold57G20229 Striga asiatica HOM05D006226 ORTHO05D007738 5.8e-18 94.7 101 48.5
THA.LOC104808766 Tarenaya hassleriana HOM05D006226 ORTHO05D007738 7.5e-18 94.4 169 33.7
Potri.018G081500 Populus trichocarpa HOM05D006226 ORTHO05D007738 4.1e-16 88.6 170 34.1
CSS0044649 Camellia sinensis var. sinensis HOM05D006226 ORTHO05D007738 5.4e-16 88.2 125 41.6
Sc16g0007880 Simmondsia chinensis HOM05D006226 ORTHO05D007738 2.0e-15 86.3 157 31.8
MBI04_g29967_MAGBIO Magnolia biondii HOM05D006226 ORTHO05D007738 3.9e-14 82.0 151 36.4
Cpa.g.sc23.97 Carica papaya HOM05D006226 ORTHO05D007738 9.5e-13 77.4 140 37.1
AagrBONN_evm.TU.Sc2ySwM_368.2586 Anthoceros agrestis HOM05D006226 ORTHO05D007738 8.9e-11 70.9 157 29.9
unitig_748.g7367 Utricularia gibba HOM05D006226 ORTHO05D007738 8.9e-11 70.9 133 33.1
EL10Ac8g18501 Beta vulgaris HOM05D006226 ORTHO05D007738 1.2e-10 70.5 147 35.4
Pp3c5_3840 Physcomitrium patens HOM05D006226 ORTHO05D007738 6.4e-09 64.7 63 46.0
Mapoly0045s0077 Marchantia polymorpha HOM05D006226 ORTHO05D007738 8.3e-09 64.3 210 24.8
Medtr6g087540 Medicago truncatula HOM05D006226 ORTHO05D007738 2.4e-08 62.8 124 33.1
HPP92_005261 Vanilla planifolia HOM05D006226 ORTHO05D007738 5.4e-08 61.6 44 61.4
Actinidia32679 Actinidia chinensis HOM05D006226 ORTHO05D007738 1.0e-06 57.4 73 42.5
CDE04G0435 Ceratophyllum demersum HOM05D006226 ORTHO05D007738 1.0e-06 57.4 142 28.9


User provided reference genes

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