Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_028618 Vanilla planifolia HOM05D004581 ORTHO05D006211 9.9e-103 376.7 181 100.0
HPP92_028667 Vanilla planifolia HOM05D004581 ORTHO05D006211 2.3e-59 232.6 202 64.9
Os09g0446200 Oryza sativa ssp. japonica HOM05D004581 ORTHO05D006211 5.8e-34 148.3 127 59.1
Zm00001eb314430 Zea mays HOM05D004581 ORTHO05D006211 8.3e-33 144.4 125 57.6
Gorai.012G099300 Gossypium raimondii HOM05D004581 ORTHO05D006211 9.2e-32 141.0 88 72.7
Gohir.D04G089200 Gossypium hirsutum HOM05D004581 ORTHO05D006211 3.5e-31 139.0 88 71.6
Nn7g35977 Nelumbo nucifera HOM05D004581 ORTHO05D006211 6.0e-31 138.3 89 69.7
Gohir.A04G057400 Gossypium hirsutum HOM05D004581 ORTHO05D006211 7.8e-31 137.9 88 71.6
SalBow6G0811 Salvia bowleyana HOM05D004581 ORTHO05D006211 7.8e-31 137.9 102 61.8
MBI19_g17421_MAGBIO Magnolia biondii HOM05D004581 ORTHO05D006211 3.9e-30 135.6 89 67.4
Manes.09G037300 Manihot esculenta HOM05D004581 ORTHO05D006211 5.0e-30 135.2 88 71.6
Sc25g0005070 Simmondsia chinensis HOM05D004581 ORTHO05D006211 6.6e-30 134.8 89 66.3
CSS0001135 Camellia sinensis var. sinensis HOM05D004581 ORTHO05D006211 8.6e-30 134.4 117 53.8
Peaxi162Scf00169g01812 Petunia axillaris HOM05D004581 ORTHO05D006211 1.1e-29 134.0 89 65.2
TWI77G0968 Tripterygium wilfordii HOM05D004581 ORTHO05D006211 1.1e-29 134.0 88 69.3
Cfa020147 Carpinus fangiana HOM05D004581 ORTHO05D006211 1.5e-29 133.7 88 69.3
FAN05G2417 Fragaria x ananassa HOM05D004581 ORTHO05D006211 1.5e-29 133.7 110 60.9
RcHm_v2.0_Chr3g0479271 Rosa chinensis HOM05D004581 ORTHO05D006211 1.5e-29 133.7 88 69.3
SGA_v2.0_scaffold105G30506 Striga asiatica HOM05D004581 ORTHO05D006211 1.5e-29 133.7 89 66.3
CiPaw.10G025500 Carya illinoinensis HOM05D004581 ORTHO05D006211 1.9e-29 133.3 88 69.3
MD12G1055200 Malus domestica HOM05D004581 ORTHO05D006211 1.9e-29 133.3 88 68.2
Nitab4.5_0000663g0140 Nicotiana tabacum HOM05D004581 ORTHO05D006211 1.9e-29 133.3 89 64.0
ClCG04G001070 Citrullus lanatus HOM05D004581 ORTHO05D006211 2.5e-29 132.9 88 64.8
TAR623G0668 Trochodendron aralioides HOM05D004581 ORTHO05D006211 2.5e-29 132.9 89 66.3
MD14G1054400 Malus domestica HOM05D004581 ORTHO05D006211 3.3e-29 132.5 88 68.2
ATR0598G120 Amborella trichopoda HOM05D004581 ORTHO05D006211 4.3e-29 132.1 89 66.3
Duzib106G1052 Durio zibethinus HOM05D004581 ORTHO05D006211 4.3e-29 132.1 88 69.3
Migut.J01852 Erythranthe guttata HOM05D004581 ORTHO05D006211 4.3e-29 132.1 89 65.2
Cc06_g15670 Coffea canephora HOM05D004581 ORTHO05D006211 5.6e-29 131.7 89 66.3
Haze_20018 Corylus avellana HOM05D004581 ORTHO05D006211 5.6e-29 131.7 110 60.0
MELO3C009016.2 Cucumis melo HOM05D004581 ORTHO05D006211 5.6e-29 131.7 88 64.8
CsaV3_4G031280 Cucumis sativus L. HOM05D004581 ORTHO05D006211 5.6e-29 131.7 88 64.8
FAN02G3358 Fragaria x ananassa HOM05D004581 ORTHO05D006211 5.6e-29 131.7 88 69.3
THA.LOC104809935 Tarenaya hassleriana HOM05D004581 ORTHO05D006211 5.6e-29 131.7 108 59.3
Potri.016G059900 Populus trichocarpa HOM05D004581 ORTHO05D006211 7.3e-29 131.3 88 67.0
Thecc.05G174500 Theobroma cacao HOM05D004581 ORTHO05D006211 7.3e-29 131.3 88 68.2
Duzib093G1426 Durio zibethinus HOM05D004581 ORTHO05D006211 9.5e-29 131.0 88 68.2
Eucgr.K01849 Eucalyptus grandis HOM05D004581 ORTHO05D006211 9.5e-29 131.0 88 68.2
FvH4_6g21970 Fragaria vesca HOM05D004581 ORTHO05D006211 9.5e-29 131.0 88 68.2
FAN14G2436 Fragaria x ananassa HOM05D004581 ORTHO05D006211 9.5e-29 131.0 88 68.2
Solyc09g009140.3 Solanum lycopersicum HOM05D004581 ORTHO05D006211 9.5e-29 131.0 89 62.9
PGSC0003DMG400002716 Solanum tuberosum HOM05D004581 ORTHO05D006211 9.5e-29 131.0 89 62.9
TWI53G1098 Tripterygium wilfordii HOM05D004581 ORTHO05D006211 9.5e-29 131.0 88 67.0
EL10Ac2g03990 Beta vulgaris HOM05D004581 ORTHO05D006211 1.2e-28 130.6 89 64.0
Sabra16G0062700 Salix brachista HOM05D004581 ORTHO05D006211 1.2e-28 130.6 88 67.0
Sopen09g003860 Solanum pennellii HOM05D004581 ORTHO05D006211 1.2e-28 130.6 89 61.8
CARHR206520 Cardamine hirsuta HOM05D004581 ORTHO05D006211 1.6e-28 130.2 88 68.2
COL.COLO4_29354 Corchorus olitorius HOM05D004581 ORTHO05D006211 1.6e-28 130.2 88 67.0
Potri.006G194200 Populus trichocarpa HOM05D004581 ORTHO05D006211 1.6e-28 130.2 88 67.0
Sabra06G0149000 Salix brachista HOM05D004581 ORTHO05D006211 1.6e-28 130.2 88 67.0
TAR369G0383 Trochodendron aralioides HOM05D004581 ORTHO05D006211 1.6e-28 130.2 117 54.7
MSTRG.19916 Avicennia marina HOM05D004581 ORTHO05D006211 2.8e-28 129.4 89 62.9
CANSAT64G2519 Cannabis sativa HOM05D004581 ORTHO05D006211 2.8e-28 129.4 88 64.8
CiPaw.09G028800 Carya illinoinensis HOM05D004581 ORTHO05D006211 2.8e-28 129.4 88 67.0
Atru.chr8.1150 Acer truncatum HOM05D004581 ORTHO05D006211 3.6e-28 129.0 93 64.5
Carub.0006s0556 Capsella rubella HOM05D004581 ORTHO05D006211 3.6e-28 129.0 88 67.0
CDE06G1527 Ceratophyllum demersum HOM05D004581 ORTHO05D006211 3.6e-28 129.0 123 53.7
ECA248G3562 Erigeron canadensis HOM05D004581 ORTHO05D006211 4.7e-28 128.6 93 62.4
Lsat_1_v5_gn_5_165321 Lactuca sativa HOM05D004581 ORTHO05D006211 4.7e-28 128.6 89 61.8
PGR142G1146 Punica granatum HOM05D004581 ORTHO05D006211 4.7e-28 128.6 88 67.0
BraA02t04889Z Brassica rapa HOM05D004581 ORTHO05D006211 8.0e-28 127.9 116 52.6
Sed0021834 Sechium edule HOM05D004581 ORTHO05D006211 1.1e-27 127.5 88 61.4
BolC2t06246H Brassica oleracea HOM05D004581 ORTHO05D006211 1.4e-27 127.1 116 51.7
HanXRQChr01g0010041 Helianthus annuus HOM05D004581 ORTHO05D006211 1.4e-27 127.1 89 60.7
QL07p024331 Quercus lobata HOM05D004581 ORTHO05D006211 1.4e-27 127.1 88 65.9
QL07p024348 Quercus lobata HOM05D004581 ORTHO05D006211 1.4e-27 127.1 88 65.9
QL07p024412 Quercus lobata HOM05D004581 ORTHO05D006211 1.4e-27 127.1 88 65.9
Sp6g36190 Schrenkiella parvula HOM05D004581 ORTHO05D006211 1.4e-27 127.1 88 67.0
Aqoxy1G00145 Aquilegia oxysepala HOM05D004581 ORTHO05D006211 1.8e-27 126.7 107 55.1
GSVIVG01033474001 Vitis vinifera HOM05D004581 ORTHO05D006211 1.8e-27 126.7 141 49.6
AT5G06680 Arabidopsis thaliana HOM05D004581 ORTHO05D006211 2.3e-27 126.3 88 67.0
CAN.G824.31 Capsicum annuum HOM05D004581 ORTHO05D006211 2.3e-27 126.3 89 61.8
C02p02810 Brassica napus HOM05D004581 ORTHO05D006211 3.1e-27 125.9 100 57.0
DCAR_013660 Daucus carota HOM05D004581 ORTHO05D006211 3.1e-27 125.9 99 59.6
AL6G16770 Arabidopsis lyrata HOM05D004581 ORTHO05D006211 4.0e-27 125.6 88 67.0
Hund19211 Selenicereus undatus HOM05D004581 ORTHO05D006211 4.0e-27 125.6 89 62.9
BcaB05g21655 Brassica carinata HOM05D004581 ORTHO05D006211 5.2e-27 125.2 116 51.7
PSO384G2020 Papaver somniferum HOM05D004581 ORTHO05D006211 6.8e-27 124.8 104 54.8
Mapoly0001s0406 Marchantia polymorpha HOM05D004581 ORTHO05D006211 8.9e-27 124.4 115 49.6
PSO339G4020 Papaver somniferum HOM05D004581 ORTHO05D006211 1.2e-26 124.0 104 54.8
Thhalv10012676m.g Eutrema salsugineum HOM05D004581 ORTHO05D006211 2.0e-26 123.2 88 65.9
Rhsim03G0004600 Rhododendron simsii HOM05D004581 ORTHO05D006211 2.0e-26 123.2 87 62.1
Aa31sc40G20 Aethionema arabicum HOM05D004581 ORTHO05D006211 4.4e-26 122.1 109 56.0
CDE04G2925 Ceratophyllum demersum HOM05D004581 ORTHO05D006211 4.4e-26 122.1 91 61.5
Ciclev10011052m.g Citrus clementina HOM05D004581 ORTHO05D006211 4.4e-26 122.1 88 62.5
vmacro07891 Vaccinium macrocarpon HOM05D004581 ORTHO05D006211 4.4e-26 122.1 87 60.9
SHI31781 Sapria himalayana HOM05D004581 ORTHO05D006211 5.8e-26 121.7 107 54.2
AUR62015335 Chenopodium quinoa HOM05D004581 ORTHO05D006211 2.2e-25 119.8 89 59.6
Lalb_Chr18g0048011 Lupinus albus HOM05D004581 ORTHO05D006211 3.7e-25 119.0 88 63.6
arahy.Tifrunner.gnm1.ann1.U2Q4B5 Arachis hypogaea HOM05D004581 ORTHO05D006211 4.9e-25 118.6 90 63.3
Pp3c24_16220 Physcomitrium patens HOM05D004581 ORTHO05D006211 4.9e-25 118.6 111 46.8
Pp3c20_16750 Physcomitrium patens HOM05D004581 ORTHO05D006211 6.4e-25 118.2 108 49.1
Phvul.001G144000 Phaseolus vulgaris HOM05D004581 ORTHO05D006211 8.3e-25 117.9 109 54.1
VMungo1383G1342 Vigna mungo HOM05D004581 ORTHO05D006211 8.3e-25 117.9 109 55.0
arahy.Tifrunner.gnm1.ann1.6E61XV Arachis hypogaea HOM05D004581 ORTHO05D006211 1.1e-24 117.5 90 62.2
Lju124A23G70 Lonicera japonica HOM05D004581 ORTHO05D006211 1.1e-24 117.5 88 62.5
unitig_0.g528 Utricularia gibba HOM05D004581 ORTHO05D006211 4.1e-24 115.5 89 58.4
Ca_08535_v3 Cicer arietinum L. HOM05D004581 ORTHO05D006211 7.0e-24 114.8 88 60.2
Glyma.03G146200 Glycine max HOM05D004581 ORTHO05D006211 7.0e-24 114.8 93 54.8
SMO356G0383 Selaginella moellendorffii HOM05D004581 ORTHO05D006211 7.0e-24 114.8 111 47.7
Nitab4.5_0006360g0040 Nicotiana tabacum HOM05D004581 ORTHO05D006211 4.6e-23 112.1 89 58.4
Actinidia14374 Actinidia chinensis HOM05D004581 ORTHO05D006211 1.0e-22 110.9 80 61.2
Glyma.19G149500 Glycine max HOM05D004581 ORTHO05D006211 1.3e-22 110.5 108 50.9
Lsat_1_v5_gn_9_26020 Lactuca sativa HOM05D004581 ORTHO05D006211 1.7e-22 110.2 89 52.8
Medtr7g093560 Medicago truncatula HOM05D004581 ORTHO05D006211 1.7e-22 110.2 88 54.5
Lj1g0024119 Lotus japonicus HOM05D004581 ORTHO05D006211 2.3e-22 109.8 105 54.3
Oeu034269.1 Olea europaea HOM05D004581 ORTHO05D006211 2.3e-22 109.8 98 57.1
Cpa.g.sc85.62 Carica papaya HOM05D004581 ORTHO05D006211 9.5e-21 104.4 70 65.7
TPR.G35787 Trifolium pratense HOM05D004581 ORTHO05D006211 2.3e-19 99.8 88 48.9
A10p29710 Brassica napus HOM05D004581 ORTHO05D006211 7.5e-18 94.7 152 36.2
BraA10t45012Z Brassica rapa HOM05D004581 ORTHO05D006211 7.5e-18 94.7 152 36.2
ECA247G1565 Erigeron canadensis HOM05D004581 ORTHO05D006211 3.2e-16 89.4 90 46.7
HanXRQChr15g0491321 Helianthus annuus HOM05D004581 ORTHO05D006211 3.2e-16 89.4 89 47.2
Actinidia22053 Actinidia chinensis HOM05D004581 ORTHO05D006211 7.1e-16 88.2 57 64.9
Actinidia14375 Actinidia chinensis HOM05D004581 ORTHO05D006211 3.6e-12 75.9 87 42.5
CBR_g7989 Chara braunii HOM05D004581 ORTHO05D006211 6.8e-11 71.6 78 44.9
MCO03G564 Micromonas commoda HOM05D004581 ORTHO05D006211 2.0e-10 70.1 100 41.0
AagrBONN_evm.TU.Sc2ySwM_344.2104 Anthoceros agrestis HOM05D004581 ORTHO05D006211 1.7e-06 57.0 41 53.7


User provided reference genes

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