Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_028403 Vanilla planifolia HOM05D008922 ORTHO05D010978 1.6e-67 259.2 124 100.0
HPP92_028411 Vanilla planifolia HOM05D008922 ORTHO05D010978 1.6e-67 259.2 124 100.0
HPP92_028427 Vanilla planifolia HOM05D008922 ORTHO05D010978 1.6e-67 259.2 124 100.0
Gohir.A12G138620 Gossypium hirsutum HOM05D008922 ORTHO05D010978 2.3e-34 149.1 80 83.8
Gohir.1Z049566 Gossypium hirsutum HOM05D008922 ORTHO05D010978 1.5e-33 146.4 80 82.5
RhsimPtG0002400 Rhododendron simsii HOM05D008922 ORTHO05D010978 4.8e-32 141.4 78 82.1
ScUNg0000580 Simmondsia chinensis HOM05D001387 ORTHO05D010978 2.4e-31 139.0 79 81.0
Gohir.D02G149550 Gossypium hirsutum HOM05D008922 ORTHO05D010978 4.5e-30 134.8 75 80.0
Solyc05g023725.1 Solanum lycopersicum HOM05D008922 ORTHO05D010978 4.5e-30 134.8 96 68.8
Gohir.D04G160150 Gossypium hirsutum HOM05D008922 ORTHO05D010978 6.7e-26 120.9 72 75.0
Gorai.005G093900 Gossypium raimondii HOM05D008922 ORTHO05D010978 3.3e-25 118.6 75 74.7
Oeu045555.1 Olea europaea HOM05D008922 ORTHO05D010978 2.8e-24 115.5 110 56.4
PGSC0003DMG400004211 Solanum tuberosum HOM05D001387 ORTHO05D001250 2.8e-24 115.5 61 86.9
Gorai.002G146700 Gossypium raimondii HOM05D008922 ORTHO05D010978 3.1e-23 112.1 76 72.4
CAN.G484.107 Capsicum annuum HOM05D008922 ORTHO05D010978 5.0e-21 104.8 67 73.1
HanXRQChr08g0235731 Helianthus annuus HOM05D000445 ORTHO05D010978 8.5e-21 104.0 59 79.7
HanXRQChr00c0585g0576281 Helianthus annuus HOM05D008922 ORTHO05D010978 1.9e-20 102.8 55 85.5
Solyc00g500033.1 Solanum lycopersicum HOM05D008922 ORTHO05D010978 7.2e-20 100.9 52 88.5
Solyc00g500078.1 Solanum lycopersicum HOM05D008922 ORTHO05D010978 7.2e-20 100.9 52 88.5
Solyc00g500129.1 Solanum lycopersicum HOM05D008922 ORTHO05D010978 7.2e-20 100.9 52 88.5
Solyc00g500199.1 Solanum lycopersicum HOM05D008922 ORTHO05D010978 7.2e-20 100.9 52 88.5
Ah.10g028480 Amaranthus hybridus HOM05D002965 ORTHO05D010183 2.7e-19 99.0 52 86.5
Solyc00g500328.1 Solanum lycopersicum HOM05D008922 ORTHO05D010978 3.6e-19 98.6 51 88.2
Migut.D02168 Erythranthe guttata HOM05D008922 ORTHO05D010978 6.1e-19 97.8 54 83.3
Solyc00g500151.1 Solanum lycopersicum HOM05D008922 ORTHO05D010978 1.0e-18 97.1 52 84.6
HanXRQChr00c0554g0575681 Helianthus annuus HOM05D008922 ORTHO05D010978 2.3e-18 95.9 72 72.2
HanXRQChr13g0413491 Helianthus annuus HOM05D005034 ORTHO05D006234 4.4e-17 91.7 50 84.0
Oeu028750.1 Olea europaea HOM05D008922 ORTHO05D010978 1.8e-15 86.3 57 70.2
Gorai.007G083900 Gossypium raimondii HOM05D008922 ORTHO05D010978 5.4e-15 84.7 47 80.9
SEGI_05822 Sequoiadendron giganteum HOM05D000216 ORTHO05D001131 5.9e-14 81.3 52 75.0
SEGI_05748 Sequoiadendron giganteum HOM05D000216 ORTHO05D001131 1.0e-13 80.5 51 76.5
EL10As9g23921 Beta vulgaris HOM05D008922 ORTHO05D010978 2.2e-13 79.3 41 87.8
Gorai.011G182500 Gossypium raimondii HOM05D008922 ORTHO05D010978 5.5e-12 74.7 48 75.0
Sc15g0001780 Simmondsia chinensis HOM05D001387 ORTHO05D001250 7.2e-12 74.3 49 69.4
Eucgr.J02736 Eucalyptus grandis HOM05D008922 ORTHO05D010978 1.6e-11 73.2 41 80.5
Migut.A01147 Erythranthe guttata HOM05D008922 ORTHO05D010978 2.7e-11 72.4 39 82.1
Sopen01g027160 Solanum pennellii HOM05D008922 ORTHO05D010978 2.7e-11 72.4 59 62.7
Solyc10g012213.1 Solanum lycopersicum HOM05D008922 ORTHO05D010978 8.0e-11 70.9 38 81.6
HanXRQChr12g0369781 Helianthus annuus HOM05D008922 ORTHO05D010978 1.4e-10 70.1 40 77.5
Psat4g046840 Pisum sativum HOM05D008922 ORTHO05D010978 1.8e-10 69.7 61 62.3
Gorai.012G032000 Gossypium raimondii HOM05D008922 ORTHO05D010978 4.4e-09 65.1 36 83.3


User provided reference genes

Program Settings