Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_028097 Vanilla planifolia HOM05D005376 ORTHO05D006481 2.3e-57 225.3 111 100.0
HPP92_014785 Vanilla planifolia HOM05D005376 ORTHO05D006481 1.2e-21 106.7 56 98.2
arahy.Tifrunner.gnm1.ann1.20ERFR Arachis hypogaea HOM05D005376 ORTHO05D006481 3.8e-20 101.7 69 79.7
Cfa016268 Carpinus fangiana HOM05D005376 ORTHO05D006481 4.9e-20 101.3 56 92.9
CDE09G0642 Ceratophyllum demersum HOM05D005376 ORTHO05D006481 4.9e-20 101.3 68 79.4
AUR62021148 Chenopodium quinoa HOM05D005376 ORTHO05D006481 4.9e-20 101.3 61 85.2
AUR62031389 Chenopodium quinoa HOM05D005376 ORTHO05D006481 4.9e-20 101.3 61 85.2
SGA_v2.0_scaffold44G16739 Striga asiatica HOM05D005376 ORTHO05D006481 6.5e-20 100.9 67 79.1
Glyma.20G161700 Glycine max HOM05D005376 ORTHO05D006481 8.4e-20 100.5 70 72.9
PGR142G2432 Punica granatum HOM05D005376 ORTHO05D006481 8.4e-20 100.5 69 79.7
Atru.chr1.400 Acer truncatum HOM05D005376 ORTHO05D006481 1.1e-19 100.1 56 91.1
AT5G52440 Arabidopsis thaliana HOM05D005376 ORTHO05D006481 1.1e-19 100.1 56 91.1
arahy.Tifrunner.gnm1.ann1.QSSI4A Arachis hypogaea HOM05D005376 ORTHO05D006481 1.1e-19 100.1 69 78.3
Carub.0008s1254 Capsella rubella HOM05D005376 ORTHO05D006481 1.1e-19 100.1 56 91.1
CARHR265430 Cardamine hirsuta HOM05D005376 ORTHO05D006481 1.1e-19 100.1 56 91.1
FvH4_7g29980 Fragaria vesca HOM05D005376 ORTHO05D006481 1.1e-19 100.1 56 91.1
FAN03G2197 Fragaria x ananassa HOM05D005376 ORTHO05D006481 1.1e-19 100.1 56 91.1
FAN03G2430 Fragaria x ananassa HOM05D005376 ORTHO05D006481 1.1e-19 100.1 56 91.1
FAN06G2500 Fragaria x ananassa HOM05D005376 ORTHO05D006481 1.1e-19 100.1 56 91.1
FAN06G2733 Fragaria x ananassa HOM05D005376 ORTHO05D006481 1.1e-19 100.1 56 91.1
FAN10G0028 Fragaria x ananassa HOM05D005376 ORTHO05D006481 1.1e-19 100.1 56 91.1
FAN10G2308 Fragaria x ananassa HOM05D005376 ORTHO05D006481 1.1e-19 100.1 56 91.1
RcHm_v2.0_Chr1g0377931 Rosa chinensis HOM05D005376 ORTHO05D006481 1.1e-19 100.1 56 91.1
EL10Ac3g05591 Beta vulgaris HOM05D005376 ORTHO05D006481 1.4e-19 99.8 64 81.2
Duzib205G1046 Durio zibethinus HOM05D005376 ORTHO05D006481 1.4e-19 99.8 56 91.1
Migut.F00319 Erythranthe guttata HOM05D005376 ORTHO05D006481 1.4e-19 99.8 66 80.3
FAN01G1606 Fragaria x ananassa HOM05D005376 ORTHO05D006481 1.4e-19 99.8 56 89.3
Gohir.A09G042000 Gossypium hirsutum HOM05D005376 ORTHO05D006481 1.4e-19 99.8 56 91.1
Gohir.D09G043122 Gossypium hirsutum HOM05D005376 ORTHO05D006481 1.4e-19 99.8 56 91.1
MBI17_g35259_MAGBIO Magnolia biondii HOM05D005376 ORTHO05D006481 1.4e-19 99.8 56 91.1
Phvul.007G073200 Phaseolus vulgaris HOM05D005376 ORTHO05D006481 1.4e-19 99.8 70 72.9
Aqoxy7G00281 Aquilegia oxysepala HOM05D005376 ORTHO05D006481 1.9e-19 99.4 61 83.6
CSS0038684 Camellia sinensis var. sinensis HOM05D005376 ORTHO05D006481 1.9e-19 99.4 67 77.6
Glyma.10G232400 Glycine max HOM05D005376 ORTHO05D006481 1.9e-19 99.4 70 71.4
Oeu004115.1 Olea europaea HOM05D005376 ORTHO05D006481 1.9e-19 99.4 56 91.1
PSO478G1134 Papaver somniferum HOM05D005376 ORTHO05D006481 1.9e-19 99.4 67 77.6
PSO782G3185 Papaver somniferum HOM05D005376 ORTHO05D006481 1.9e-19 99.4 67 77.6
AL8G26870 Arabidopsis lyrata HOM05D005376 ORTHO05D006481 2.5e-19 99.0 56 89.3
BcaB05g21960 Brassica carinata HOM05D005376 ORTHO05D006481 2.5e-19 99.0 109 56.9
SalBow4G0945 Salvia bowleyana HOM05D005376 ORTHO05D006481 2.5e-19 99.0 66 78.8
Aa31LG3G8830 Aethionema arabicum HOM05D005376 ORTHO05D006481 3.2e-19 98.6 56 89.3
Cpa.g.sc107.83 Carica papaya HOM05D005376 ORTHO05D006481 3.2e-19 98.6 56 89.3
CiPaw.06G001100 Carya illinoinensis HOM05D005376 ORTHO05D006481 3.2e-19 98.6 56 89.3
Ciclev10005655m.g Citrus clementina HOM05D005376 ORTHO05D006481 3.2e-19 98.6 56 89.3
Dinv35232 Davidia involucrata HOM05D005376 ORTHO05D006481 3.2e-19 98.6 56 89.3
Eucgr.K00283 Eucalyptus grandis HOM05D005376 ORTHO05D006481 3.2e-19 98.6 56 89.3
Lj5g0000296 Lotus japonicus HOM05D005376 ORTHO05D006481 3.2e-19 98.6 56 89.3
Lalb_Chr06g0161271 Lupinus albus HOM05D005376 ORTHO05D006481 3.2e-19 98.6 75 70.7
Oeu022600.1 Olea europaea HOM05D005376 ORTHO05D006481 3.2e-19 98.6 56 89.3
Potri.015G147100 Populus trichocarpa HOM05D005376 ORTHO05D006481 3.2e-19 98.6 56 89.3
QL09p013410 Quercus lobata HOM05D005376 ORTHO05D006481 3.2e-19 98.6 56 89.3
Sed0004337 Sechium edule HOM05D005376 ORTHO05D006481 3.2e-19 98.6 56 89.3
THA.LOC104825106 Tarenaya hassleriana HOM05D005376 ORTHO05D006481 3.2e-19 98.6 56 89.3
ATR0680G109 Amborella trichopoda HOM05D005376 ORTHO05D006481 4.2e-19 98.2 56 89.3
Duzib084G0056 Durio zibethinus HOM05D005376 ORTHO05D006481 4.2e-19 98.2 56 89.3
Manes.14G024100 Manihot esculenta HOM05D005376 ORTHO05D006481 4.2e-19 98.2 56 89.3
Os11g0580800 Oryza sativa ssp. japonica HOM05D005376 ORTHO05D006481 4.2e-19 98.2 61 82.0
Potri.012G144300 Populus trichocarpa HOM05D005376 ORTHO05D006481 4.2e-19 98.2 56 89.3
Prupe.2G298400 Prunus persica HOM05D005376 ORTHO05D006481 4.2e-19 98.2 61 82.0
TWI39G0402 Tripterygium wilfordii HOM05D005376 ORTHO05D006481 4.2e-19 98.2 68 73.5
Ah.13g068730 Amaranthus hybridus HOM05D005376 ORTHO05D006481 5.5e-19 97.8 56 87.5
MSTRG.27099 Avicennia marina HOM05D005376 ORTHO05D006481 5.5e-19 97.8 66 77.3
BcaB01g04203 Brassica carinata HOM05D005376 ORTHO05D006481 5.5e-19 97.8 56 89.3
BcaC03g14530 Brassica carinata HOM05D005376 ORTHO05D006481 5.5e-19 97.8 56 89.3
A02p11810 Brassica napus HOM05D005376 ORTHO05D006481 5.5e-19 97.8 56 89.3
A03p15670 Brassica napus HOM05D005376 ORTHO05D006481 5.5e-19 97.8 56 89.3
C02p19650 Brassica napus HOM05D005376 ORTHO05D006481 5.5e-19 97.8 56 89.3
C03p18310 Brassica napus HOM05D005376 ORTHO05D006481 5.5e-19 97.8 56 89.3
BolC2t08101H Brassica oleracea HOM05D005376 ORTHO05D006481 5.5e-19 97.8 56 89.3
BolC3t14229H Brassica oleracea HOM05D005376 ORTHO05D006481 5.5e-19 97.8 56 89.3
BraA02t06246Z Brassica rapa HOM05D005376 ORTHO05D006481 5.5e-19 97.8 56 89.3
BraA03t10859Z Brassica rapa HOM05D005376 ORTHO05D006481 5.5e-19 97.8 56 89.3
Thhalv10014513m.g Eutrema salsugineum HOM05D005376 ORTHO05D006481 5.5e-19 97.8 56 89.3
MD07G1276100 Malus domestica HOM05D005376 ORTHO05D006481 5.5e-19 97.8 56 89.3
Sp6g14660 Schrenkiella parvula HOM05D005376 ORTHO05D006481 5.5e-19 97.8 56 89.3
Hund04774 Selenicereus undatus HOM05D005376 ORTHO05D006481 5.5e-19 97.8 56 89.3
Actinidia20875 Actinidia chinensis HOM05D005376 ORTHO05D006481 7.1e-19 97.4 56 87.5
VMungo0720G1970 Vigna mungo HOM05D005376 ORTHO05D006481 7.1e-19 97.4 70 71.4
Cc02_g02590 Coffea canephora HOM05D005376 ORTHO05D006481 9.3e-19 97.1 56 87.5
HanXRQChr09g0252451 Helianthus annuus HOM05D005376 ORTHO05D006481 9.3e-19 97.1 56 87.5
Nn1g01558 Nelumbo nucifera HOM05D005376 ORTHO05D006481 9.3e-19 97.1 56 89.3
Manes.06G150900 Manihot esculenta HOM05D005376 ORTHO05D006481 1.2e-18 96.7 70 71.4
Zm00001eb085050 Zea mays HOM05D005376 ORTHO05D006481 1.2e-18 96.7 56 85.7
Lsat_1_v5_gn_9_57581 Lactuca sativa HOM05D005376 ORTHO05D006481 1.6e-18 96.3 56 87.5
SEGI_07365 Sequoiadendron giganteum HOM05D005376 ORTHO05D006481 1.6e-18 96.3 56 87.5
BcaC01g06187 Brassica carinata HOM05D005376 ORTHO05D006481 2.1e-18 95.9 56 87.5
CsaV3_3G017320 Cucumis sativus L. HOM05D005376 ORTHO05D006481 2.1e-18 95.9 56 87.5
TWI23G0148 Tripterygium wilfordii HOM05D005376 ORTHO05D006481 2.1e-18 95.9 56 85.7
Zm00001eb421330 Zea mays HOM05D005376 ORTHO05D006481 2.1e-18 95.9 56 83.9
CANSAT21G2457 Cannabis sativa HOM05D005376 ORTHO05D006481 2.7e-18 95.5 56 85.7
Lsat_1_v5_gn_8_6901 Lactuca sativa HOM05D005376 ORTHO05D006481 2.7e-18 95.5 56 83.9
Migut.F01097 Erythranthe guttata HOM05D005376 ORTHO05D006481 3.5e-18 95.1 56 85.7
Actinidia34140 Actinidia chinensis HOM05D005376 ORTHO05D006481 7.9e-18 94.0 56 85.7
DCAR_009379 Daucus carota HOM05D005376 ORTHO05D006481 1.0e-17 93.6 95 57.9
Pp3c16_8830 Physcomitrium patens HOM05D005376 ORTHO05D006481 1.3e-17 93.2 68 75.0
ECA233G3491 Erigeron canadensis HOM05D005376 ORTHO05D006481 1.8e-17 92.8 56 82.1
CBR_g49097 Chara braunii HOM05D005376 ORTHO05D006481 3.0e-17 92.0 54 85.2
Gorai.006G049600 Gossypium raimondii HOM05D005376 ORTHO05D006481 3.0e-17 92.0 65 78.5
MCO14G251 Micromonas commoda HOM05D005376 ORTHO05D006481 1.1e-16 90.1 56 80.4
Pp3c5_19450 Physcomitrium patens HOM05D005376 ORTHO05D006481 2.5e-16 89.0 56 80.4
Pp3c5_19453 Physcomitrium patens HOM05D005376 ORTHO05D006481 2.5e-16 89.0 56 80.4
Haze_00025 Corylus avellana HOM05D005376 ORTHO05D006481 5.7e-16 87.8 80 65.0
Nitab4.5_0000084g0270 Nicotiana tabacum HOM05D005376 ORTHO05D006481 5.7e-16 87.8 56 82.1
Mapoly0083s0037 Marchantia polymorpha HOM05D005376 ORTHO05D006481 9.7e-16 87.0 56 76.8
SMO223G0008 Selaginella moellendorffii HOM05D005376 ORTHO05D006481 9.7e-16 87.0 56 75.0
MELO3C006928.2 Cucumis melo HOM05D005376 ORTHO05D006481 1.6e-15 86.3 70 70.0
Rhsim03G0188900 Rhododendron simsii HOM05D005376 ORTHO05D006481 1.6e-15 86.3 56 80.4
RhsimUnG0027200 Rhododendron simsii HOM05D005376 ORTHO05D006481 1.6e-15 86.3 56 80.4
AagrBONN_evm.TU.Sc2ySwM_117.3925 Anthoceros agrestis HOM05D005376 ORTHO05D006481 2.8e-15 85.5 56 73.2
Sc19g0001360 Simmondsia chinensis HOM05D005376 ORTHO05D006481 2.8e-15 85.5 67 68.7
Nitab4.5_0001625g0010 Nicotiana tabacum HOM05D005376 ORTHO05D006481 4.8e-15 84.7 87 59.8
Sabra12G0108300 Salix brachista HOM05D005376 ORTHO05D006481 1.1e-14 83.6 83 60.2
GSVIVG01028894001 Vitis vinifera HOM05D005376 ORTHO05D006481 3.4e-13 78.6 54 74.1
PRCOL_00002629 Prasinoderma coloniale HOM05D005376 ORTHO05D006481 7.6e-13 77.4 56 66.1
ClCG05G008230 Citrullus lanatus HOM05D005376 ORTHO05D006481 1.0e-12 77.0 56 76.8
COL.COLO4_28026 Corchorus olitorius HOM05D005376 ORTHO05D006481 1.4e-11 73.2 56 71.4
ECA232G4406 Erigeron canadensis HOM05D005376 ORTHO05D006481 2.5e-11 72.4 56 67.9
Hma1.2p1_0227F.1_g096040 Hydrangea macrophylla HOM05D005376 ORTHO05D006481 2.5e-11 72.4 56 69.6
PGSC0003DMG400010161 Solanum tuberosum HOM05D005376 ORTHO05D006481 5.5e-11 71.2 56 69.6
Thecc.03G181600 Theobroma cacao HOM05D005376 ORTHO05D006481 5.5e-11 71.2 56 69.6
TAR636G3226 Trochodendron aralioides HOM05D005376 ORTHO05D006481 5.5e-11 71.2 56 69.6
Cre08.g371650 Chlamydomonas reinhardtii HOM05D005376 ORTHO05D006481 9.4e-11 70.5 58 53.4
TPR.G27004 Trifolium pratense HOM05D004749 ORTHO05D005995 1.2e-10 70.1 66 62.1
Ca_10737_v3 Cicer arietinum L. HOM05D004749 ORTHO05D005995 1.6e-10 69.7 56 67.9
Medtr1g100220 Medicago truncatula HOM05D005376 ORTHO05D006481 1.6e-10 69.7 56 67.9
Psat6g193680 Pisum sativum HOM05D005376 ORTHO05D006481 2.7e-10 68.9 56 66.1
CAN.G236.14 Capsicum annuum HOM05D005376 ORTHO05D006481 3.6e-10 68.6 56 67.9
Solyc03g025310.3 Solanum lycopersicum HOM05D005376 ORTHO05D006481 3.6e-10 68.6 56 67.9
Sopen03g004140 Solanum pennellii HOM05D005376 ORTHO05D006481 3.6e-10 68.6 56 67.9
Lalb_Chr02g0141171 Lupinus albus HOM05D005376 ORTHO05D006481 1.8e-09 66.2 51 62.7
Hma1.2p1_0044F.1_g025970 Hydrangea macrophylla HOM05D005376 ORTHO05D006481 1.5e-08 63.2 37 81.1
Hund11730 Selenicereus undatus HOM05D005376 ORTHO05D006481 1.5e-08 63.2 56 62.5
Hma1.2p1_0299F.1_g117880 Hydrangea macrophylla HOM05D005376 ORTHO05D006481 1.8e-06 56.2 37 73.0


User provided reference genes

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