Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_028071 Vanilla planifolia HOM05D005442 ORTHO05D006450 7.1e-265 916.8 480 100.0
HPP92_022198 Vanilla planifolia HOM05D005442 ORTHO05D006450 1.5e-238 829.3 460 95.2
HPP92_022180 Vanilla planifolia HOM05D005442 ORTHO05D006450 4.3e-238 827.8 484 91.7
Os02g0101100 Oryza sativa ssp. japonica HOM05D005442 ORTHO05D006450 2.5e-44 184.1 195 55.9
TAR369G0572 Trochodendron aralioides HOM05D005442 ORTHO05D006450 2.9e-40 170.6 497 33.6
Zm00001eb134390 Zea mays HOM05D005442 ORTHO05D006450 4.9e-40 169.9 449 35.2
TAR376G0424 Trochodendron aralioides HOM05D005442 ORTHO05D006450 6.4e-40 169.5 465 34.0
Dinv41924 Davidia involucrata HOM05D005442 ORTHO05D006450 1.1e-39 168.7 278 43.9
Nn1g06499 Nelumbo nucifera HOM05D005442 ORTHO05D006450 1.2e-38 165.2 458 35.8
TWI31G1375 Tripterygium wilfordii HOM05D005442 ORTHO05D006450 3.5e-38 163.7 328 37.8
Eucgr.I01451 Eucalyptus grandis HOM05D005442 ORTHO05D006450 2.3e-37 161.0 316 40.8
Ciclev10028168m.g Citrus clementina HOM05D005442 ORTHO05D006450 6.6e-37 159.5 465 33.8
CSS0044298 Camellia sinensis var. sinensis HOM05D005442 ORTHO05D006450 1.1e-36 158.7 423 36.4
Thecc.02G056900 Theobroma cacao HOM05D005442 ORTHO05D006450 1.5e-36 158.3 460 33.0
Atru.chr5.3384 Acer truncatum HOM05D005442 ORTHO05D006450 4.3e-36 156.8 257 44.0
GSVIVG01023996001 Vitis vinifera HOM05D005442 ORTHO05D006450 5.6e-36 156.4 438 35.2
Actinidia21468 Actinidia chinensis HOM05D005442 ORTHO05D006450 7.3e-36 156.0 415 36.4
Actinidia39159 Actinidia chinensis HOM05D005442 ORTHO05D006450 3.6e-35 153.7 415 36.1
Sed0001500 Sechium edule HOM05D005442 ORTHO05D006450 1.4e-34 151.8 323 37.2
vmacro17319 Vaccinium macrocarpon HOM05D005442 ORTHO05D006450 1.8e-34 151.4 343 37.0
CiPaw.05G084400 Carya illinoinensis HOM05D005442 ORTHO05D006450 3.1e-34 150.6 448 33.9
Sc08g0002780 Simmondsia chinensis HOM05D005442 ORTHO05D006450 3.1e-34 150.6 238 45.0
Gohir.D02G227000 Gossypium hirsutum HOM05D005442 ORTHO05D006450 1.5e-33 148.3 261 42.9
CsaV3_2G016200 Cucumis sativus L. HOM05D005442 ORTHO05D006450 3.4e-33 147.1 235 42.6
Solyc01g111720.4 Solanum lycopersicum HOM05D005442 ORTHO05D006450 4.4e-33 146.7 236 43.6
Sopen01g053760 Solanum pennellii HOM05D005442 ORTHO05D006450 4.4e-33 146.7 233 43.8
CDE04G0468 Ceratophyllum demersum HOM05D005442 ORTHO05D000996 1.3e-32 145.2 202 49.5
Gohir.A03G205700 Gossypium hirsutum HOM05D005442 ORTHO05D006450 1.3e-32 145.2 261 42.1
MELO3C020828.2 Cucumis melo HOM05D005442 ORTHO05D006450 2.2e-32 144.4 235 41.7
Gorai.005G254900 Gossypium raimondii HOM05D005442 ORTHO05D006450 2.9e-32 144.1 261 42.1
MBI11_g07617_MAGBIO Magnolia biondii HOM05D005442 ORTHO05D006450 4.9e-32 143.3 308 39.3
QL11p051413 Quercus lobata HOM05D005442 ORTHO05D006450 6.4e-32 142.9 442 33.9
CDE02G3112 Ceratophyllum demersum HOM05D005442 ORTHO05D006450 8.4e-32 142.5 166 53.6
PGSC0003DMG400006166 Solanum tuberosum HOM05D005442 ORTHO05D006450 1.4e-31 141.7 238 41.2
Cpa.g.sc20.103 Carica papaya HOM05D005442 ORTHO05D006450 1.9e-31 141.4 340 38.8
Peaxi162Scf00362g00530 Petunia axillaris HOM05D005442 ORTHO05D006450 2.4e-31 141.0 289 37.4
Haze_13370 Corylus avellana HOM05D005442 ORTHO05D006450 3.2e-31 140.6 323 36.5
ATR0763G134 Amborella trichopoda HOM05D005442 ORTHO05D006450 4.2e-31 140.2 227 44.5
Aqoxy6G02079 Aquilegia oxysepala HOM05D005442 ORTHO05D006450 7.1e-31 139.4 235 41.7
PSO541G1416 Papaver somniferum HOM05D005442 ORTHO05D006450 9.3e-31 139.0 414 32.4
PSO675G1865 Papaver somniferum HOM05D005442 ORTHO05D006450 1.6e-30 138.3 420 33.1
CANSAT56G0103 Cannabis sativa HOM05D005442 ORTHO05D006450 4.6e-30 136.7 252 41.7
ClCG02G012030 Citrullus lanatus HOM05D005442 ORTHO05D006450 6.0e-30 136.3 394 31.7
PGR142G2067 Punica granatum HOM05D005442 ORTHO05D006450 1.0e-29 135.6 435 33.3
Lj5g0013939 Lotus japonicus HOM05D005442 ORTHO05D006450 2.3e-29 134.4 230 40.9
Lalb_Chr06g0163701 Lupinus albus HOM05D005442 ORTHO05D006450 5.1e-29 133.3 247 43.7
Hund06446 Selenicereus undatus HOM05D005442 ORTHO05D006450 8.7e-29 132.5 477 30.6
Ca_03302_v3 Cicer arietinum L. HOM05D005442 ORTHO05D006450 1.9e-28 131.3 221 43.4
ECA233G3196 Erigeron canadensis HOM05D005442 ORTHO05D006450 3.3e-28 130.6 251 42.2
Lsat_1_v5_gn_6_13820 Lactuca sativa HOM05D005442 ORTHO05D006450 9.6e-28 129.0 336 35.7
Atru.chr3.3284 Acer truncatum HOM05D005442 ORTHO05D006450 2.1e-27 127.9 177 45.8
Aa31LG8G14120 Aethionema arabicum HOM05D005442 ORTHO05D006450 6.2e-27 126.3 234 42.7
MD05G1123900 Malus domestica HOM05D005442 ORTHO05D006450 6.2e-27 126.3 182 45.6
COL.COLO4_17367 Corchorus olitorius HOM05D005442 ORTHO05D006450 1.1e-26 125.6 234 41.5
arahy.Tifrunner.gnm1.ann1.WUXL4S Arachis hypogaea HOM05D005442 ORTHO05D006450 1.8e-26 124.8 224 41.5
Phvul.007G018400 Phaseolus vulgaris HOM05D005442 ORTHO05D006450 1.8e-26 124.8 236 40.7
arahy.Tifrunner.gnm1.ann1.ZGQ44R Arachis hypogaea HOM05D005442 ORTHO05D006450 2.4e-26 124.4 220 42.3
Glyma.20G106900 Glycine max HOM05D005442 ORTHO05D006450 3.1e-26 124.0 206 43.2
Rhsim05G0053500 Rhododendron simsii HOM05D005442 ORTHO05D006450 4.0e-26 123.6 438 32.0
AUR62010020 Chenopodium quinoa HOM05D005442 ORTHO05D006450 6.9e-26 122.9 261 38.3
Manes.01G140900 Manihot esculenta HOM05D005442 ORTHO05D006450 2.6e-25 120.9 430 29.5
EL10Ac9g21351 Beta vulgaris HOM05D005442 ORTHO05D006450 7.6e-25 119.4 509 31.0
Sabra09G0106500 Salix brachista HOM05D005442 ORTHO05D006450 7.6e-25 119.4 520 30.2
SalBow1G0486 Salvia bowleyana HOM05D005442 ORTHO05D006450 2.9e-24 117.5 206 41.3
MSTRG.16924 Avicennia marina HOM05D005442 ORTHO05D006450 4.9e-24 116.7 334 35.3
Medtr1g112820 Medicago truncatula HOM05D005442 ORTHO05D002291 4.9e-24 116.7 242 38.4
AUR62013010 Chenopodium quinoa HOM05D005442 ORTHO05D006450 6.4e-24 116.3 472 30.1
unitig_744.g24278 Utricularia gibba HOM05D005442 ORTHO05D006450 8.4e-24 115.9 200 41.0
Psat6g232320 Pisum sativum HOM05D005442 ORTHO05D006450 1.9e-23 114.8 262 38.9
FAN15G0807 Fragaria x ananassa HOM05D005442 ORTHO05D006450 4.2e-23 113.6 225 39.1
FAN27G2972 Fragaria x ananassa HOM05D005442 ORTHO05D006450 7.1e-23 112.8 199 40.2
Glyma.10G282700 Glycine max HOM05D005442 ORTHO05D006450 1.2e-22 112.1 220 40.5
Cc09_g09800 Coffea canephora HOM05D005442 ORTHO05D006450 6.0e-22 109.8 471 29.5
Duzib132G0277 Durio zibethinus HOM05D005442 ORTHO05D006450 1.0e-21 109.0 246 37.8
Thhalv10022629m.g Eutrema salsugineum HOM05D005442 ORTHO05D006450 1.3e-21 108.6 211 42.7
FvH4_2g15550 Fragaria vesca HOM05D005442 ORTHO05D006450 1.7e-21 108.2 265 36.2
FAN24G2500 Fragaria x ananassa HOM05D005442 ORTHO05D006450 1.7e-21 108.2 265 36.2
SGA_v2.0_scaffold58G20356 Striga asiatica HOM05D002097 ORTHO05D002248 3.9e-21 107.1 356 33.7
A07p04140 Brassica napus HOM05D005442 ORTHO05D006450 5.1e-21 106.7 225 37.3
BraA07t28205Z Brassica rapa HOM05D005442 ORTHO05D006450 5.1e-21 106.7 225 37.3
Prupe.8G167900 Prunus persica HOM05D005442 ORTHO05D006450 6.6e-21 106.3 202 40.6
FAN20G2789 Fragaria x ananassa HOM05D005442 ORTHO05D006450 8.7e-21 105.9 225 37.8
BcaC06g36199 Brassica carinata HOM05D005442 ORTHO05D006450 1.5e-20 105.1 225 36.9
C07p06570 Brassica napus HOM05D005442 ORTHO05D006450 1.5e-20 105.1 225 36.9
BolC7t41079H Brassica oleracea HOM05D005442 ORTHO05D006450 1.5e-20 105.1 225 36.9
CARHR033820 Cardamine hirsuta HOM05D005442 ORTHO05D006450 1.5e-20 105.1 243 37.9
AT1G34360 Arabidopsis thaliana HOM05D005442 ORTHO05D006450 2.5e-20 104.4 216 40.3
RcHm_v2.0_Chr6g0278721 Rosa chinensis HOM05D005442 ORTHO05D006450 3.3e-20 104.0 320 32.5
THA.LOC104807379 Tarenaya hassleriana HOM05D005442 ORTHO05D006450 4.3e-20 103.6 255 36.9
VMungo0720G2182 Vigna mungo HOM05D005442 ORTHO05D006450 4.3e-20 103.6 208 40.4
Carub.0001s3251 Capsella rubella HOM05D005442 ORTHO05D006450 5.6e-20 103.2 270 36.3
AL1G48920 Arabidopsis lyrata HOM05D005442 ORTHO05D006450 7.4e-20 102.8 278 36.3
BcaB03g16428 Brassica carinata HOM05D005442 ORTHO05D006450 7.4e-20 102.8 271 34.3
Sp3g30220 Schrenkiella parvula HOM05D005442 ORTHO05D006450 7.4e-20 102.8 271 36.2
HanXRQChr08g0227271 Helianthus annuus HOM05D005442 ORTHO05D006450 1.3e-19 102.1 342 29.5
DCAR_011887 Daucus carota HOM05D005442 ORTHO05D006450 3.6e-19 100.5 270 31.5
Actinidia32035 Actinidia chinensis HOM05D005442 ORTHO05D006450 4.0e-18 97.1 473 32.6
Ah.01g023170 Amaranthus hybridus HOM05D005442 ORTHO05D006450 4.0e-18 97.1 495 27.7
Migut.B00066 Erythranthe guttata HOM05D005442 ORTHO05D006450 5.8e-17 93.2 251 34.3
Lj5A177G54 Lonicera japonica HOM05D005442 ORTHO05D006450 1.7e-16 91.7 260 34.2
SHI05769 Sapria himalayana HOM05D005442 ORTHO05D006450 1.9e-15 88.2 261 27.6
Mapoly0037s0141 Marchantia polymorpha HOM05D005442 ORTHO05D006450 2.1e-14 84.7 155 36.8
Cfa023336 Carpinus fangiana HOM05D005442 ORTHO05D006450 1.0e-13 82.4 113 45.1
arahy.Tifrunner.gnm1.ann1.U87P2U Arachis hypogaea HOM05D005442 ORTHO05D006450 8.7e-13 79.3 107 49.5
Cc02_g27640 Coffea canephora HOM05D005442 ORTHO05D006450 1.5e-12 78.6 397 27.0
SMO171G0119 Selaginella moellendorffii HOM05D005442 ORTHO05D006450 1.5e-12 78.6 176 33.5
TPR.G2470 Trifolium pratense HOM05D005442 ORTHO05D006450 1.9e-12 78.2 238 31.9
Pp3c16_14950 Physcomitrium patens HOM05D005442 ORTHO05D006450 9.6e-12 75.9 179 35.8
Pp3c27_2790 Physcomitrium patens HOM05D005442 ORTHO05D006450 2.4e-10 71.2 176 35.2
Oeu032532.1 Olea europaea HOM05D005442 ORTHO05D006450 3.1e-10 70.9 182 32.4
AagrBONN_evm.TU.Sc2ySwM_344.3952 Anthoceros agrestis HOM05D005442 ORTHO05D006450 1.0e-08 65.9 190 30.5
Potri.009G137000 Populus trichocarpa HOM05D005442 ORTHO05D006450 1.0e-08 65.9 339 27.1
CAN.G588.92 Capsicum annuum HOM05D005442 ORTHO05D006450 2.9e-08 64.3 165 33.3
Lj5A177G53 Lonicera japonica HOM05D005442 ORTHO05D006450 2.5e-07 61.2 88 47.7
Zm00001eb120040 Zea mays HOM05D028877 ORTHO05D006450 2.5e-07 61.2 53 52.8
Zm00001eb136510 Zea mays HOM05D028877 ORTHO05D006450 2.5e-07 61.2 53 52.8
Actinidia21470 Actinidia chinensis HOM05D005442 ORTHO05D006450 5.5e-07 60.1 249 30.9
CBR_g29438 Chara braunii HOM05D005442 ORTHO05D006450 6.0e-06 56.6 156 31.4
Oeu015514.1 Olea europaea HOM05D005442 ORTHO05D006450 6.0e-06 56.6 82 48.8


User provided reference genes

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