Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_027193 Vanilla planifolia HOM05D000652 ORTHO05D000486 2.3e-79 298.9 156 100.0
HPP92_016289 Vanilla planifolia HOM05D000652 ORTHO05D000486 3.7e-21 105.5 118 58.5
HPP92_016308 Vanilla planifolia HOM05D000652 ORTHO05D000486 4.8e-21 105.1 122 57.4
HPP92_004127 Vanilla planifolia HOM05D000652 ORTHO05D000486 3.8e-10 68.9 168 38.7
CDE05G3690 Ceratophyllum demersum HOM05D000652 ORTHO05D000486 1.1e-09 67.4 78 57.7
TAR629G2668 Trochodendron aralioides HOM05D000652 ORTHO05D000486 4.2e-09 65.5 78 56.4
Nn4g23719 Nelumbo nucifera HOM05D000652 ORTHO05D000486 9.4e-09 64.3 78 55.1
THA.LOC104801758 Tarenaya hassleriana HOM05D000652 ORTHO05D000486 2.1e-08 63.2 78 53.8
FAN07G2559 Fragaria x ananassa HOM05D000652 ORTHO05D000486 2.7e-08 62.8 78 55.1
RcHm_v2.0_Chr4g0435901 Rosa chinensis HOM05D000652 ORTHO05D000486 2.7e-08 62.8 78 55.1
THA.LOC104821964 Tarenaya hassleriana HOM05D000652 ORTHO05D000486 2.7e-08 62.8 78 53.8
Aqoxy3G03904 Aquilegia oxysepala HOM05D000652 ORTHO05D000486 3.6e-08 62.4 78 53.8
Cfa018633 Carpinus fangiana HOM05D000652 ORTHO05D000486 3.6e-08 62.4 78 55.1
FvH4_4g28130 Fragaria vesca HOM05D000652 ORTHO05D000486 3.6e-08 62.4 78 53.8
Oeu044631.2 Olea europaea HOM05D000652 ORTHO05D000486 3.6e-08 62.4 78 55.1
SalBow8G3594 Salvia bowleyana HOM05D000652 ORTHO05D000486 3.6e-08 62.4 81 53.1
ATR0564G310 Amborella trichopoda HOM05D000652 ORTHO05D000486 4.7e-08 62.0 44 70.5
DCAR_007224 Daucus carota HOM05D000652 ORTHO05D000486 4.7e-08 62.0 81 53.1
MD13G1047100 Malus domestica HOM05D000652 ORTHO05D000486 4.7e-08 62.0 81 54.3
Nn3g17709 Nelumbo nucifera HOM05D000652 ORTHO05D000486 4.7e-08 62.0 78 53.8
Prupe.1G304900 Prunus persica HOM05D000652 ORTHO05D000486 4.7e-08 62.0 78 55.1
MBI12_g24826_MAGBIO Magnolia biondii HOM05D000652 ORTHO05D000486 6.1e-08 61.6 157 36.9
MD16G1048700 Malus domestica HOM05D000652 ORTHO05D000486 6.1e-08 61.6 78 53.8
vmacro01363 Vaccinium macrocarpon HOM05D000652 ORTHO05D000486 6.1e-08 61.6 78 53.8
Aa31LG2G6600 Aethionema arabicum HOM05D000652 ORTHO05D000486 8.0e-08 61.2 78 52.6
ClCG05G023040 Citrullus lanatus HOM05D000652 ORTHO05D000486 8.0e-08 61.2 78 55.1
MELO3C012213.2 Cucumis melo HOM05D000652 ORTHO05D000486 8.0e-08 61.2 78 55.1
CsaV3_5G033960 Cucumis sativus L. HOM05D000652 ORTHO05D000486 8.0e-08 61.2 78 55.1
ECA234G0591 Erigeron canadensis HOM05D000652 ORTHO05D000486 8.0e-08 61.2 78 53.8
HanXRQChr17g0552271 Helianthus annuus HOM05D000652 ORTHO05D000486 8.0e-08 61.2 78 52.6
Lsat_1_v5_gn_3_58041 Lactuca sativa HOM05D000652 ORTHO05D000486 8.0e-08 61.2 78 52.6
Lsat_1_v5_gn_4_19561 Lactuca sativa HOM05D000652 ORTHO05D000486 8.0e-08 61.2 78 53.8
Lj5g0001067 Lotus japonicus HOM05D000652 ORTHO05D000486 8.0e-08 61.2 78 53.8
PGR119G0675 Punica granatum HOM05D000652 ORTHO05D000486 8.0e-08 61.2 78 53.8
TWI75G1777 Tripterygium wilfordii HOM05D000652 ORTHO05D000486 8.0e-08 61.2 154 37.7
Zm00001eb011370 Zea mays HOM05D000652 ORTHO05D000486 8.0e-08 61.2 80 55.0
CSS0005697 Camellia sinensis var. sinensis HOM05D000652 ORTHO05D000486 1.0e-07 60.8 78 53.8
Dinv05801 Davidia involucrata HOM05D000652 ORTHO05D000486 1.0e-07 60.8 78 53.8
Eucgr.G02351 Eucalyptus grandis HOM05D000652 ORTHO05D000486 1.0e-07 60.8 78 53.8
Glyma.10G205000 Glycine max HOM05D000652 ORTHO05D000486 1.0e-07 60.8 78 53.8
Oeu024090.1 Olea europaea HOM05D000652 ORTHO05D000486 1.0e-07 60.8 78 55.1
Phvul.007G101900 Phaseolus vulgaris HOM05D000652 ORTHO05D000486 1.0e-07 60.8 78 53.8
VMungo0720G3033 Vigna mungo HOM05D000652 ORTHO05D000486 1.0e-07 60.8 78 53.8
MSTRG.816 Avicennia marina HOM05D000652 ORTHO05D000486 1.4e-07 60.5 78 53.8
CANSAT64G1177 Cannabis sativa HOM05D000652 ORTHO05D000486 1.4e-07 60.5 78 53.8
Cpa.g.sc53.118 Carica papaya HOM05D000652 ORTHO05D000486 1.4e-07 60.5 78 53.8
CiPaw.15G003100 Carya illinoinensis HOM05D000652 ORTHO05D000486 1.4e-07 60.5 78 53.8
Haze_17436 Corylus avellana HOM05D000652 ORTHO05D000486 1.4e-07 60.5 78 53.8
Dinv16509 Davidia involucrata HOM05D000652 ORTHO05D000486 1.4e-07 60.5 78 53.8
Glyma.20G185500 Glycine max HOM05D000652 ORTHO05D000486 1.4e-07 60.5 78 53.8
Lj3A1020G57 Lonicera japonica HOM05D000652 ORTHO05D000486 1.4e-07 60.5 78 53.8
Lj2g0000183 Lotus japonicus HOM05D000652 ORTHO05D000486 1.4e-07 60.5 78 53.8
Os03g0260600 Oryza sativa ssp. japonica HOM05D000652 ORTHO05D000486 1.4e-07 60.5 79 55.7
PSO591G0188 Papaver somniferum HOM05D000652 ORTHO05D000486 1.4e-07 60.5 78 52.6
PSO832G0821 Papaver somniferum HOM05D000652 ORTHO05D000486 1.4e-07 60.5 78 52.6
QL01p001057 Quercus lobata HOM05D000652 ORTHO05D000486 1.4e-07 60.5 78 53.8
Rhsim12G0081200 Rhododendron simsii HOM05D000652 ORTHO05D000486 1.4e-07 60.5 78 53.8
Sc04g0006750 Simmondsia chinensis HOM05D000652 ORTHO05D000486 1.4e-07 60.5 118 42.4
TAR371G0987 Trochodendron aralioides HOM05D000652 ORTHO05D000486 1.4e-07 60.5 78 53.8
GSVIVG01011960001 Vitis vinifera HOM05D000652 ORTHO05D000486 1.4e-07 60.5 78 53.8
Atru.chr11.1360 Acer truncatum HOM05D000652 ORTHO05D000486 1.8e-07 60.1 78 53.8
MSTRG.13502 Avicennia marina HOM05D000652 ORTHO05D000486 1.8e-07 60.1 78 52.6
CSS0003757 Camellia sinensis var. sinensis HOM05D000652 ORTHO05D000486 1.8e-07 60.1 78 53.8
CSS0038419 Camellia sinensis var. sinensis HOM05D000652 ORTHO05D000486 1.8e-07 60.1 78 53.8
CAN.G184.87 Capsicum annuum HOM05D000652 ORTHO05D000486 1.8e-07 60.1 78 53.8
Ciclev10031900m.g Citrus clementina HOM05D000652 ORTHO05D000486 1.8e-07 60.1 78 53.8
Cc11_g10650 Coffea canephora HOM05D000652 ORTHO05D000486 1.8e-07 60.1 78 53.8
COL.COLO4_07864 Corchorus olitorius HOM05D000652 ORTHO05D000486 1.8e-07 60.1 78 53.8
Gohir.A12G170800 Gossypium hirsutum HOM05D000652 ORTHO05D000486 1.8e-07 60.1 78 53.8
Gohir.D12G174000 Gossypium hirsutum HOM05D000652 ORTHO05D000486 1.8e-07 60.1 78 53.8
Gorai.008G186700 Gossypium raimondii HOM05D000652 ORTHO05D000486 1.8e-07 60.1 78 53.8
Manes.06G072600 Manihot esculenta HOM05D000652 ORTHO05D000486 1.8e-07 60.1 78 53.8
Manes.14G097100 Manihot esculenta HOM05D000652 ORTHO05D000486 1.8e-07 60.1 78 53.8
Nitab4.5_0004122g0010 Nicotiana tabacum HOM05D000652 ORTHO05D000486 1.8e-07 60.1 78 53.8
Nitab4.5_0004838g0010 Nicotiana tabacum HOM05D000652 ORTHO05D000486 1.8e-07 60.1 78 53.8
Peaxi162Scf00380g00016 Petunia axillaris HOM05D000652 ORTHO05D000486 1.8e-07 60.1 78 53.8
Potri.008G116000 Populus trichocarpa HOM05D000652 ORTHO05D000486 1.8e-07 60.1 78 53.8
Thecc.02G361700 Theobroma cacao HOM05D000652 ORTHO05D000486 1.8e-07 60.1 78 53.8
vmacro10525 Vaccinium macrocarpon HOM05D000652 ORTHO05D000486 1.8e-07 60.1 78 52.6
Actinidia13678 Actinidia chinensis HOM05D000652 ORTHO05D000486 2.3e-07 59.7 78 52.6
Lj6A766T35 Lonicera japonica HOM05D000652 ORTHO05D000486 2.3e-07 59.7 160 37.5
Lalb_Chr02g0151781 Lupinus albus HOM05D000652 ORTHO05D000486 2.3e-07 59.7 78 53.8
unitig_26.g10270 Utricularia gibba HOM05D000652 ORTHO05D000486 2.3e-07 59.7 78 53.8
Glyma.01G088300 Glycine max HOM05D000652 ORTHO05D000486 3.0e-07 59.3 78 52.6
HanXRQChr16g0528911 Helianthus annuus HOM05D000652 ORTHO05D000486 3.0e-07 59.3 78 52.6
Sed0013926 Sechium edule HOM05D000652 ORTHO05D000486 3.0e-07 59.3 78 52.6
Medtr1g093750 Medicago truncatula HOM05D000652 ORTHO05D000486 4.0e-07 58.9 78 52.6
Potri.010G130000 Populus trichocarpa HOM05D000652 ORTHO05D000486 4.0e-07 58.9 78 52.6
Hund05769 Selenicereus undatus HOM05D000652 ORTHO05D000486 4.0e-07 58.9 131 38.2
SGA_v2.0_scaffold14G06819 Striga asiatica HOM05D000652 ORTHO05D000486 4.0e-07 58.9 78 52.6
TPR.G40240 Trifolium pratense HOM05D000652 ORTHO05D000486 4.0e-07 58.9 78 52.6
Duzib268G1180 Durio zibethinus HOM05D000652 ORTHO05D000486 5.2e-07 58.5 78 52.6
HanXRQChr17g0568271 Helianthus annuus HOM05D000652 ORTHO05D000486 5.2e-07 58.5 78 52.6
Lalb_Chr10g0099691 Lupinus albus HOM05D000652 ORTHO05D000486 5.2e-07 58.5 78 52.6
Phvul.003G026800 Phaseolus vulgaris HOM05D000652 ORTHO05D000486 5.2e-07 58.5 78 52.6
MSTRG.7692 Avicennia marina HOM05D000652 ORTHO05D000486 6.7e-07 58.2 78 51.3
Duzib251G0872 Durio zibethinus HOM05D000652 ORTHO05D000486 6.7e-07 58.2 78 52.6
FAN22G2252 Fragaria x ananassa HOM05D000652 ORTHO05D000486 6.7e-07 58.2 84 50.0
Gohir.D13G069400 Gossypium hirsutum HOM05D000652 ORTHO05D000486 6.7e-07 58.2 78 51.3
Sed0010186 Sechium edule HOM05D000652 ORTHO05D000486 6.7e-07 58.2 78 52.6
TWI31G0557 Tripterygium wilfordii HOM05D000652 ORTHO05D000486 6.7e-07 58.2 78 52.6
Actinidia38397 Actinidia chinensis HOM05D000652 ORTHO05D000486 8.8e-07 57.8 78 52.6
arahy.Tifrunner.gnm1.ann1.7TY7IR Arachis hypogaea HOM05D000652 ORTHO05D000486 8.8e-07 57.8 78 52.6
arahy.Tifrunner.gnm1.ann1.8FT653 Arachis hypogaea HOM05D000652 ORTHO05D000486 8.8e-07 57.8 78 52.6
arahy.Tifrunner.gnm1.ann1.F457JH Arachis hypogaea HOM05D000652 ORTHO05D000486 8.8e-07 57.8 78 52.6
arahy.Tifrunner.gnm1.ann1.WW4HGU Arachis hypogaea HOM05D000652 ORTHO05D000486 8.8e-07 57.8 78 52.6
CiPaw.16G002900 Carya illinoinensis HOM05D000652 ORTHO05D000486 8.8e-07 57.8 143 38.5
DCAR_030086 Daucus carota HOM05D000652 ORTHO05D000486 8.8e-07 57.8 81 50.6
ECA246G2775 Erigeron canadensis HOM05D005369 ORTHO05D006955 8.8e-07 57.8 78 51.3
Migut.E00296 Erythranthe guttata HOM05D000652 ORTHO05D000486 8.8e-07 57.8 78 51.3
FAN12G3331 Fragaria x ananassa HOM05D000652 ORTHO05D000486 8.8e-07 57.8 84 48.8
Gohir.A13G052800 Gossypium hirsutum HOM05D000652 ORTHO05D000486 8.8e-07 57.8 78 51.3
Gorai.013G079600 Gossypium raimondii HOM05D000652 ORTHO05D000486 8.8e-07 57.8 40 72.5
Nitab4.5_0005703g0010 Nicotiana tabacum HOM05D000652 ORTHO05D000486 8.8e-07 57.8 78 50.0
Hund25105 Selenicereus undatus HOM05D000652 ORTHO05D000486 8.8e-07 57.8 78 53.8
Rhsim09G0112800 Rhododendron simsii HOM05D000652 ORTHO05D000486 1.2e-06 57.4 78 51.3
THA.LOC104805243 Tarenaya hassleriana HOM05D000652 ORTHO05D000486 1.2e-06 57.4 131 36.6
Ca_10519_v3 Cicer arietinum L. HOM05D000652 ORTHO05D000486 1.5e-06 57.0 78 52.6
Lalb_Chr04g0255001 Lupinus albus HOM05D000652 ORTHO05D000486 1.5e-06 57.0 78 51.3
Sabra08G0087900 Salix brachista HOM05D000652 ORTHO05D000486 1.5e-06 57.0 78 52.6
SEGI_12414 Sequoiadendron giganteum HOM05D000652 ORTHO05D000486 1.5e-06 57.0 78 51.3
VMungo1215G1474 Vigna mungo HOM05D000652 ORTHO05D000486 2.0e-06 56.6 78 51.3
CDE02G0264 Ceratophyllum demersum HOM05D000652 ORTHO05D000486 2.6e-06 56.2 44 63.6
AUR62002923 Chenopodium quinoa HOM05D000652 ORTHO05D000486 2.6e-06 56.2 78 51.3
AUR62035285 Chenopodium quinoa HOM05D000652 ORTHO05D000486 2.6e-06 56.2 78 51.3
Hma1.2p1_0406F.1_g146010 Hydrangea macrophylla HOM05D000652 ORTHO05D000486 2.6e-06 56.2 78 52.6
Zm00001eb398190 Zea mays HOM05D000652 ORTHO05D000486 2.6e-06 56.2 79 53.2
Actinidia14346 Actinidia chinensis HOM05D000652 ORTHO05D000486 3.3e-06 55.8 45 66.7
Actinidia14848 Actinidia chinensis HOM05D000652 ORTHO05D000486 3.3e-06 55.8 45 66.7
EL10Ac6g14503 Beta vulgaris HOM05D000652 ORTHO05D000486 3.3e-06 55.8 78 51.3
Lalb_Chr06g0170251 Lupinus albus HOM05D000652 ORTHO05D000486 3.3e-06 55.8 81 49.4
Nitab4.5_0000414g0040 Nicotiana tabacum HOM05D000652 ORTHO05D000486 3.3e-06 55.8 39 66.7
Sed0018767 Sechium edule HOM05D000652 ORTHO05D000486 3.3e-06 55.8 78 50.0
SGA_v2.0_scaffold16G07890 Striga asiatica HOM05D000652 ORTHO05D000486 3.3e-06 55.8 168 34.5
Aa31LG8G10160 Aethionema arabicum HOM05D000652 ORTHO05D000486 4.4e-06 55.5 78 50.0
AT3G25710 Arabidopsis thaliana HOM05D000652 ORTHO05D000486 4.4e-06 55.5 78 48.7
arahy.Tifrunner.gnm1.ann1.QSZJ9K Arachis hypogaea HOM05D000652 ORTHO05D000486 4.4e-06 55.5 78 51.3
BcaB07g30256 Brassica carinata HOM05D000652 ORTHO05D000486 4.4e-06 55.5 78 50.0
CDE08G0184 Ceratophyllum demersum HOM05D000652 ORTHO05D000486 4.4e-06 55.5 44 63.6
Sopen04g002080 Solanum pennellii HOM05D000652 ORTHO05D000486 4.4e-06 55.5 79 51.9
Actinidia16614 Actinidia chinensis HOM05D000652 ORTHO05D000486 5.7e-06 55.1 78 51.3
AT1G68810 Arabidopsis thaliana HOM05D000652 ORTHO05D000486 5.7e-06 55.1 78 50.0
BcaB03g15448 Brassica carinata HOM05D000652 ORTHO05D000486 5.7e-06 55.1 78 50.0
BcaB03g15851 Brassica carinata HOM05D000652 ORTHO05D000486 5.7e-06 55.1 78 50.0
BcaC06g31122 Brassica carinata HOM05D000652 ORTHO05D000486 5.7e-06 55.1 78 50.0
A07p31790 Brassica napus HOM05D000652 ORTHO05D000486 5.7e-06 55.1 78 50.0
BolC6t38834H Brassica oleracea HOM05D000652 ORTHO05D000486 5.7e-06 55.1 78 50.0
BraA07t30806Z Brassica rapa HOM05D000652 ORTHO05D000486 5.7e-06 55.1 78 50.0
Carub.0002s1539 Capsella rubella HOM05D000652 ORTHO05D000486 5.7e-06 55.1 78 50.0
CARHR061640 Cardamine hirsuta HOM05D000652 ORTHO05D000486 5.7e-06 55.1 78 50.0
Thhalv10018758m.g Eutrema salsugineum HOM05D000652 ORTHO05D000486 5.7e-06 55.1 78 50.0
SMO165G0062 Selaginella moellendorffii HOM05D000652 ORTHO05D000486 5.7e-06 55.1 131 35.1
Solyc05g009880.3 Solanum lycopersicum HOM05D000652 ORTHO05D000486 5.7e-06 55.1 78 51.3
Sopen05g005680 Solanum pennellii HOM05D000652 ORTHO05D000486 5.7e-06 55.1 78 51.3
PGSC0003DMG400000824 Solanum tuberosum HOM05D000652 ORTHO05D000486 5.7e-06 55.1 78 51.3
AL5G14250 Arabidopsis lyrata HOM05D000652 ORTHO05D000486 7.5e-06 54.7 78 48.7
BcaC03g17287 Brassica carinata HOM05D000652 ORTHO05D000486 7.5e-06 54.7 78 48.7
A02p34020 Brassica napus HOM05D000652 ORTHO05D000486 7.5e-06 54.7 78 48.7
C02p52330 Brassica napus HOM05D000652 ORTHO05D000486 7.5e-06 54.7 78 48.7
BolC2t11316H Brassica oleracea HOM05D000652 ORTHO05D000486 7.5e-06 54.7 78 48.7
BraA02t08423Z Brassica rapa HOM05D000652 ORTHO05D000486 7.5e-06 54.7 78 48.7
MD12G1095300 Malus domestica HOM05D000652 ORTHO05D000486 7.5e-06 54.7 44 65.9
MD14G1091000 Malus domestica HOM05D000652 ORTHO05D000486 7.5e-06 54.7 44 65.9
Psat3g080040 Pisum sativum HOM05D000652 ORTHO05D000486 7.5e-06 54.7 44 65.9
Sp5g23920 Schrenkiella parvula HOM05D000652 ORTHO05D000486 7.5e-06 54.7 78 50.0
PGSC0003DMG400007457 Solanum tuberosum HOM05D000652 ORTHO05D000486 7.5e-06 54.7 79 50.6
THA.LOC104825715 Tarenaya hassleriana HOM05D000652 ORTHO05D000486 7.5e-06 54.7 78 50.0
BcaC06g33966 Brassica carinata HOM05D000652 ORTHO05D000486 9.7e-06 54.3 78 50.0
A06p42580 Brassica napus HOM05D000652 ORTHO05D000486 9.7e-06 54.3 78 50.0
C07p34570 Brassica napus HOM05D000652 ORTHO05D000486 9.7e-06 54.3 78 50.0
BolC7t43989H Brassica oleracea HOM05D000652 ORTHO05D000486 9.7e-06 54.3 78 50.0
BraA06t27173Z Brassica rapa HOM05D000652 ORTHO05D000486 9.7e-06 54.3 78 50.0
ClCG06G009690 Citrullus lanatus HOM05D000652 ORTHO05D000486 9.7e-06 54.3 78 51.3
MELO3C020417.2 Cucumis melo HOM05D000652 ORTHO05D000486 9.7e-06 54.3 78 51.3
QL07p011490 Quercus lobata HOM05D000652 ORTHO05D000486 9.7e-06 54.3 44 65.9


User provided reference genes

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