Gene: Sopen05g005680

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen05g005680
  • Transcript Identifier Sopen05g005680.1
  • Gene Type Coding gene
  • Location Spenn-ch05 : 4560335-4563180 : positive

Gene Family Information

  • ID HOM05D000652
  • #Genes/#Species 874/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen05g005680.1

Descriptions

  • Description basic helix-loop-helix (bHLH) DNA-binding superfamily protein | FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity | INVOLVED IN: regulation of transcription | LOCATED IN: nucleus | EXPRESSED IN: 20 plant structures | EXPRESSED DURING: 12 growth stages | CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain , Helix-loop-helix DNA-binding | BEST Arabidopsis thaliana protein match is: basic helix-loop-helix 32
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009718
ISO
PLAZA Integrative Orthologyanthocyanin-containing compound biosynthetic process AT3G25710
GO:0048364
ISO
PLAZA Integrative Orthologyroot development AT3G25710
GO:0006355
ISO
PLAZA Integrative Orthologyregulation of transcription, DNA-templated AT3G25710
GO:0080147
ISO
PLAZA Integrative Orthologyroot hair cell development AT3G25710
GO:0016036
ISO
PLAZA Integrative Orthologycellular response to phosphate starvation AT3G25710

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046983
IEA
InterProprotein dimerization activity
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT3G25710

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT3G25710

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR011598 Myc-type, basic helix-loop-helix (bHLH) domain
IPR036638 Helix-loop-helix DNA-binding domain superfamily
Mapman id Description
15.5.30 RNA biosynthesis.transcriptional regulation.transcription factor (bHLH)