Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_026327 Vanilla planifolia HOM05D000771 ORTHO05D001963 1.5e-40 169.1 85 100.0
TAR636G0018 Trochodendron aralioides HOM05D000771 ORTHO05D001963 2.3e-09 65.5 55 56.4
CDE02G4567 Ceratophyllum demersum HOM05D000771 ORTHO05D001963 5.1e-09 64.3 31 87.1
Nn6g34621 Nelumbo nucifera HOM05D000771 ORTHO05D001963 5.1e-09 64.3 35 82.9
CDE04G3409 Ceratophyllum demersum HOM05D000771 ORTHO05D001963 1.1e-08 63.2 31 83.9
Actinidia01750 Actinidia chinensis HOM05D000771 ORTHO05D001963 1.9e-08 62.4 57 52.6
ATR0697G213 Amborella trichopoda HOM05D000771 ORTHO05D001963 1.9e-08 62.4 44 72.7
Cfa003393 Carpinus fangiana HOM05D000771 ORTHO05D001963 2.5e-08 62.0 45 68.9
Haze_25556 Corylus avellana HOM05D000771 ORTHO05D001963 2.5e-08 62.0 45 68.9
CiPaw.03G245800 Carya illinoinensis HOM05D000771 ORTHO05D001963 5.7e-08 60.8 32 81.2
TAR626G1272 Trochodendron aralioides HOM05D000771 ORTHO05D001963 7.4e-08 60.5 34 76.5
TAR633G1780 Trochodendron aralioides HOM05D000771 ORTHO05D001963 7.4e-08 60.5 43 60.5
HPP92_023159 Vanilla planifolia HOM05D000771 ORTHO05D001963 7.4e-08 60.5 58 53.4
Dinv33551 Davidia involucrata HOM05D000771 ORTHO05D001963 9.7e-08 60.1 35 74.3
Thecc.09G128800 Theobroma cacao HOM05D000771 ORTHO05D001963 9.7e-08 60.1 46 63.0
TWI34G0240 Tripterygium wilfordii HOM05D000771 ORTHO05D001963 9.7e-08 60.1 43 62.8
Dinv41494 Davidia involucrata HOM05D000771 ORTHO05D001963 1.3e-07 59.7 46 63.0
Hma1.2p1_0018F.1_g012250 Hydrangea macrophylla HOM05D000771 ORTHO05D001963 1.3e-07 59.7 45 60.0
Nn2g12067 Nelumbo nucifera HOM05D000771 ORTHO05D001963 1.3e-07 59.7 34 76.5
CSS0049938 Camellia sinensis var. sinensis HOM05D000771 ORTHO05D001963 1.7e-07 59.3 31 80.6
Dinv36506 Davidia involucrata HOM05D000771 ORTHO05D001963 1.7e-07 59.3 46 65.2
Hma1.2p1_0931F.1_g238130 Hydrangea macrophylla HOM05D000771 ORTHO05D001963 1.7e-07 59.3 34 73.5
Potri.018G129700 Populus trichocarpa HOM05D000771 ORTHO05D001963 1.7e-07 59.3 40 65.0
Actinidia40484 Actinidia chinensis HOM05D000771 ORTHO05D001963 2.2e-07 58.9 40 72.5
SalBow6G3004 Salvia bowleyana HOM05D000771 ORTHO05D001963 2.2e-07 58.9 39 66.7
SGA_v2.0_scaffold100G29612 Striga asiatica HOM05D000771 ORTHO05D001963 2.2e-07 58.9 36 72.2
Ah.14g079700 Amaranthus hybridus HOM05D000771 ORTHO05D001963 2.8e-07 58.5 61 49.2
CANSAT11G2574 Cannabis sativa HOM05D000771 ORTHO05D001963 3.7e-07 58.2 45 62.2
DCAR_014893 Daucus carota HOM05D000771 ORTHO05D001963 4.8e-07 57.8 35 68.6
Migut.D02387 Erythranthe guttata HOM05D000771 ORTHO05D001963 4.8e-07 57.8 33 69.7
MBI01_g29251_MAGBIO Magnolia biondii HOM05D000771 ORTHO05D001963 4.8e-07 57.8 37 67.6
MBI05_g18603_MAGBIO Magnolia biondii HOM05D000771 ORTHO05D001963 4.8e-07 57.8 45 64.4
Nitab4.5_0001349g0070 Nicotiana tabacum HOM05D000771 ORTHO05D001963 4.8e-07 57.8 33 75.8
SGA_v2.0_scaffold22G09811 Striga asiatica HOM05D000771 ORTHO05D001963 4.8e-07 57.8 33 72.7
Solyc12g009590.2 Solanum lycopersicum HOM05D000771 ORTHO05D001963 6.3e-07 57.4 39 69.2
Sopen12g004580 Solanum pennellii HOM05D000771 ORTHO05D001963 6.3e-07 57.4 39 69.2
PGSC0003DMG400002913 Solanum tuberosum HOM05D000771 ORTHO05D001963 6.3e-07 57.4 39 69.2
Aqoxy7G03675 Aquilegia oxysepala HOM05D000771 ORTHO05D001963 8.2e-07 57.0 40 65.0
CDE07G0474 Ceratophyllum demersum HOM05D000771 ORTHO05D001963 8.2e-07 57.0 40 60.0
Peaxi162Scf00313g00818 Petunia axillaris HOM05D000771 ORTHO05D001963 8.2e-07 57.0 34 70.6
Potri.006G067700 Populus trichocarpa HOM05D000771 ORTHO05D001963 8.2e-07 57.0 40 65.0
QL02p088992 Quercus lobata HOM05D000771 ORTHO05D001963 8.2e-07 57.0 32 75.0
Actinidia21973 Actinidia chinensis HOM05D000771 ORTHO05D001963 1.1e-06 56.6 41 58.5
arahy.Tifrunner.gnm1.ann1.BMRM52 Arachis hypogaea HOM05D000771 ORTHO05D001963 1.1e-06 56.6 45 64.4
arahy.Tifrunner.gnm1.ann1.F2LXEC Arachis hypogaea HOM05D000771 ORTHO05D001963 1.1e-06 56.6 45 64.4
Cc04_g04330 Coffea canephora HOM05D000771 ORTHO05D001963 1.1e-06 56.6 39 66.7
Cc06_g08300 Coffea canephora HOM05D000771 ORTHO05D001963 1.1e-06 56.6 39 66.7
PGR102G2200 Punica granatum HOM05D000771 ORTHO05D001963 1.1e-06 56.6 39 64.1
TAR383G1099 Trochodendron aralioides HOM05D000771 ORTHO05D001350 1.1e-06 56.6 46 63.0
AUR62011150 Chenopodium quinoa HOM05D000771 ORTHO05D001963 1.4e-06 56.2 45 57.8
Gohir.D05G016400 Gossypium hirsutum HOM05D000771 ORTHO05D001963 1.4e-06 56.2 45 60.0
Gorai.009G016600 Gossypium raimondii HOM05D000771 ORTHO05D001963 1.4e-06 56.2 45 60.0
MD02G1029600 Malus domestica HOM05D000771 ORTHO05D001963 1.4e-06 56.2 49 57.1
Oeu051471.1 Olea europaea HOM05D000771 ORTHO05D001963 1.4e-06 56.2 33 72.7
TAR625G0253 Trochodendron aralioides HOM05D000771 ORTHO05D001963 1.4e-06 56.2 46 63.0
VMungo1309G1072 Vigna mungo HOM05D000771 ORTHO05D001963 1.4e-06 56.2 35 68.6
Hund09261 Selenicereus undatus HOM05D000771 ORTHO05D001963 1.8e-06 55.8 36 66.7
Solyc07g008170.2 Solanum lycopersicum HOM05D000771 ORTHO05D001963 1.8e-06 55.8 31 77.4
Sopen07g004040 Solanum pennellii HOM05D000771 ORTHO05D001963 1.8e-06 55.8 31 77.4
GSVIVG01036046001 Vitis vinifera HOM05D000771 ORTHO05D001963 1.8e-06 55.8 44 56.8
Ah.09g225240 Amaranthus hybridus HOM05D000771 ORTHO05D001963 2.4e-06 55.5 40 60.0
Duzib187G1926 Durio zibethinus HOM05D000771 ORTHO05D001963 2.4e-06 55.5 37 64.9
Lsat_1_v5_gn_8_59200 Lactuca sativa HOM05D000771 ORTHO05D001963 2.4e-06 55.5 31 77.4
Nn8g39487 Nelumbo nucifera HOM05D000771 ORTHO05D001963 2.4e-06 55.5 33 72.7
QL01p019266 Quercus lobata HOM05D000771 ORTHO05D001963 2.4e-06 55.5 40 62.5
FAN23G1760 Fragaria x ananassa HOM05D000771 ORTHO05D001963 3.1e-06 55.1 33 69.7
Hma1.2p1_0101F.1_g049630 Hydrangea macrophylla HOM05D000771 ORTHO05D001963 3.1e-06 55.1 40 62.5
Lj4g0000070 Lotus japonicus HOM05D000771 ORTHO05D001963 3.1e-06 55.1 32 71.9
Sed0007251 Sechium edule HOM05D000771 ORTHO05D001963 3.1e-06 55.1 45 60.0
TPR.G26494 Trifolium pratense HOM05D000771 ORTHO05D001963 3.1e-06 55.1 35 68.6
DCAR_020917 Daucus carota HOM05D000771 ORTHO05D001963 4.1e-06 54.7 39 61.5
Glyma.06G224700 Glycine max HOM05D000771 ORTHO05D001963 4.1e-06 54.7 45 62.2
HanXRQChr06g0180421 Helianthus annuus HOM05D000771 ORTHO05D001963 4.1e-06 54.7 36 66.7
PSO339G4013 Papaver somniferum HOM05D000771 ORTHO05D001963 4.1e-06 54.7 36 66.7
PSO384G2032 Papaver somniferum HOM05D000771 ORTHO05D001963 4.1e-06 54.7 36 66.7
Sc18g0000480 Simmondsia chinensis HOM05D000771 ORTHO05D001963 4.1e-06 54.7 39 59.0
Cfa010208 Carpinus fangiana HOM05D000771 ORTHO05D001963 5.3e-06 54.3 40 60.0
Prupe.7G245300 Prunus persica HOM05D000771 ORTHO05D001963 5.3e-06 54.3 40 65.0
Ciclev10025929m.g Citrus clementina HOM05D000771 ORTHO05D001963 6.9e-06 53.9 50 48.0
Duzib150G1691 Durio zibethinus HOM05D000771 ORTHO05D001963 6.9e-06 53.9 45 55.6
FvH4_1g03020 Fragaria vesca HOM05D000771 ORTHO05D001963 6.9e-06 53.9 33 66.7
FAN13G2533 Fragaria x ananassa HOM05D000771 ORTHO05D001963 6.9e-06 53.9 33 66.7
FAN14G2647 Fragaria x ananassa HOM05D000771 ORTHO05D001963 6.9e-06 53.9 33 66.7
FAN26G1268 Fragaria x ananassa HOM05D000771 ORTHO05D001963 6.9e-06 53.9 33 66.7
FAN28G2420 Fragaria x ananassa HOM05D000771 ORTHO05D001963 6.9e-06 53.9 33 66.7
Glyma.04G154500 Glycine max HOM05D000771 ORTHO05D001963 6.9e-06 53.9 45 60.0
Gohir.A05G015300 Gossypium hirsutum HOM05D000771 ORTHO05D001963 6.9e-06 53.9 45 57.8
Lalb_Chr08g0234701 Lupinus albus HOM05D000771 ORTHO05D001963 6.9e-06 53.9 45 60.0
Solyc06g068140.3 Solanum lycopersicum HOM05D000771 ORTHO05D001963 6.9e-06 53.9 33 66.7
Sopen06g025410 Solanum pennellii HOM05D000771 ORTHO05D001963 6.9e-06 53.9 33 66.7
SGA_v2.0_scaffold117G32356 Striga asiatica HOM05D000771 ORTHO05D001963 6.9e-06 53.9 31 74.2
GSVIVG01015565001 Vitis vinifera HOM05D000771 ORTHO05D001963 6.9e-06 53.9 33 69.7
CiPaw.01G247100 Carya illinoinensis HOM05D000771 ORTHO05D001963 9.1e-06 53.5 39 59.0
Glyma.06G217500 Glycine max HOM05D000771 ORTHO05D001963 9.1e-06 53.5 45 60.0
Medtr0339s0020 Medicago truncatula HOM05D000771 ORTHO05D001963 9.1e-06 53.5 34 70.6
Medtr4g114770 Medicago truncatula HOM05D000771 ORTHO05D001963 9.1e-06 53.5 34 70.6
Medtr4g114785 Medicago truncatula HOM05D000771 ORTHO05D001963 9.1e-06 53.5 34 70.6
RcHm_v2.0_Chr2g0088151 Rosa chinensis HOM05D000771 ORTHO05D001963 9.1e-06 53.5 39 66.7
THA.LOC104813565 Tarenaya hassleriana HOM05D000771 ORTHO05D001963 9.1e-06 53.5 48 52.1
TWI32G1344 Tripterygium wilfordii HOM05D000771 ORTHO05D001963 9.1e-06 53.5 40 60.0


User provided reference genes

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